Multilocus phylogeny reveals an association of agriculturally important Fusarium solani species complex (FSSC) 11, and clinically important FSSC 5 and FSSC 3 + 4 with soybean roots in the north central United States

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• 作者：P. Chitrampalam ; B. Nelson Jr
• 关键词：Root rot ; Fusarium solani species complex ; Soybean ; Phylogenetic species
• 刊名：Antonie van Leeuwenhoek
• 出版年：2016
• 出版时间：February 2016
• 年：2016
• 卷：109
• 期：2
• 页码：335-347
• 全文大小：1,046 KB
• 参考文献：Anaissie EJ, Kuchar RT, Rex JH, Francesconi A, Kasai M, Müller FMC, Lozano-Chiu M, Summerbell RC, Dignani MC, Chanock SJ, Walsh TJ (2001) Fusariosis associated with pathogenic Fusarium species colonization of a hospital water system: a new paradigm for the epidemiology of opportunistic mold infections. Clin Infect Dis 33:1871–1878CrossRef PubMed
  Bienapfl JC (2011) Fusarium and Phytophthora species associated with root rot of soybean (Glycine max). Minnesota, USA: University of Minnesota, PhD thesis
  Bogale M, Steenkamp ET, Wingfield MJ (2009) Diverse Fusarium solani isolates colonize agricultural environments in Ethiopia. Eur J Plant Pathol 124:369–378CrossRef
  Bradley CA (2008) Effect of fungicide seed treatment on stand establishment, seedling disease, and yield of soybean in North Dakota. Plant Dis 92:120–125CrossRef
  Broders KD, Lipps PE, Paul PA, Dorrance AE (2007) Evaluation of Fusarium graminearum associated with corn and soybean seed and seedling diseases in Ohio. Plant Dis 91:1155–1160CrossRef
  Chehri K, Salleh B, Zakaria L (2015) Morphological and phylogenetic analysis of Fusarium solani species complex in Malaysia. Microb Ecol 69:457–471PubMedCentral CrossRef PubMed
  Chitrampalam P, Nelson BD Jr (2014) Effect of Fusarium tricinctum on growth of soybean and a molecular-based method of identification. Plant Health Prog. doi:10.​1094/​PHP-RS-14-0014
  Gachango E, Hanson LE, Rojas A, Hao JJ, Kirk WW (2012) Fusarium spp. causing dry rot of seed potato tubers in Michigan and their sensitivity to fungicides. Plant Dis 96:1767–1774CrossRef
  Gehmann K, Nyfeler R, Leadbeater AJ, Nevill D, Sozzi D (1990) CGA 173506: A new phenylpyrrole fungicide for broad-spectrum disease control. Brighton Crop Prot Conf Pests Dis 2:399–406
  Godoy P, Cano J, Gené J, Guarro J, Höfling-Lima AL, Colombo AL (2004) Genotyping of 44 isolates of Fusarium solani, the main agent of fungal keratitis in Brazil. J Clin Microbiol 42:4494–4497PubMedCentral CrossRef PubMed
  Grant CE, Phipps PM, Roane CW (1981) Etiology of damping-off disease of soybeans in Virginia. Phytopathology 71:767
  Honraet K, De Vos MM, Summerbell RC, van Kempen I, De Saeger S, Vermeersch H et al (2005) Recurrent colonization of successively implanted tracheoesophageal vocal prostheses by a member of the Fusarium solani complex. J Clin Microbiol 43:770–777PubMedCentral CrossRef PubMed
  Jones FR (1923) Stem and root rot of peas in the United States caused by species of Fusarium. J Agric Res 26:459–476
  Kanetis L, Förster H, Jones CA, Borkovich KA, Adaskaveg JE (2008) Characterization of genetic and biochemical mechanisms of fludioxonil and pyrimethanil resistance in field isolates of Penicillium digitatum. Phytopathology 98:205–214CrossRef PubMed
  Kerenyi Z, Moretti A, Waalwijk C, Olah B, Hornok L (2004) Mating type sequences in asexually reproducing Fusarium species. Appl Environ Microbiol 70:4419–4423PubMedCentral CrossRef PubMed
  Killebrew JF, Roy KW, Lawrence GW, McLean KS, Hodges HH (1988) Green house and field evaluation of Fusarium solani pathogenicity to soybean seedlings. Plant Dis 72:1067–1070CrossRef
  Klag NG, Papavizas GC, Bean GA, Kantzes JG (1978) Root rot of soybeans in Maryland. Plant Dis Rep 62:235–239
  Matuo T, Snyder WC (1973) Use of morphology and mating populations in the identification of formae speciales in Fusarium solani. Phytopathology 63:562–565CrossRef
  Mehl HL, Epstein L (2007) Fusarium solani species complex isolates conspecific with Fusarium solani f. sp. cucurbitae race 2 from naturally infected human and plant tissue and environmental sources are equally virulent on plants, grow at 37 °C and are interfertile. Environ Microbiol 9:2189–2199CrossRef PubMed
  Nalim AF, Smauels JG, Wijesundera LR, Geiser MD (2011) New species from the Fusarim solani species complex derived from perithecia and soil in the old world tropics. Mycologia 103:1302–1330CrossRef PubMed
  Navi SS, Yang XB (2008) Foliar symptom expression in association with early infection and xylem colonization by Fusarium virguliforme (formerly F. solani f. sp. glycines), the causal agent of soybean death syndrome. Plant Health. doi:10.​1094/​PHP-2008-0222-01-RS
  Nelson BD, Hansen JM, Windels CE, Helms TC (1997) Reaction of soybean cultivars to isolates of Fusarium solani from the Red River Valley. Plant Dis 81:664–668CrossRef
  Nucci M, Anaissie E (2007) Fusarium infections in immunocompromised patients. Clinl Microbiol Rev 20:695–704CrossRef
  O’Donnell K (2000) Molecular phylogeny of the Nectria haematococca-Fusarium solani species complex. Mycologia 92:919–938CrossRef
  O’Donnell K, Sutton DA, Fothergill A, McCarthy D, Rinaldi MG, Brandt ME et al (2008) Molecular phylogenetic diversity, multilocus haplotype nomenclature, and in vitro antifungal resistance within the Fusarium solani species complex. J Clin Microbiol 46:2477–2490PubMedCentral CrossRef PubMed
  Ortoneda M, Guarro J, Madrid MP, Caracuel Z, Roncero MI, Mayayo E, Di Pietro A (2004) Fusarium oxysporum as a multihost model for the genetic dissection of fungal virulence in plants and mammals. Infect Immun 72:1760–1766PubMedCentral CrossRef PubMed
  Roy KW, Hershman DE, Rupe JC, Abney TS (1997) Sudden death syndrome of soybean. Plant Dis 81:1100–1111CrossRef
  Short DPG, O’Donnell K, Zhang N, Juba JH, Geiser DM (2011) Wide spread occurrence of diverse human pathogenic types of the fungus Fusarium detected in plumbing drains. J Clin Microbiol 49:4264–4272PubMedCentral CrossRef PubMed
  Short DPG, O’Donnell K, Thrane U, Nielsen KF, Zhang N, Juba JH, Geiser DM (2013) Phylogenetic relationships among members of the Fusarium solani species complex in human infections and the descriptions of F. keratoplasticum sp. nov. and F. petroliphilum stat. nov. Fungal Genet Biol 53:59–70CrossRef PubMed
  Snyder WC, Hansen HN (1941) The species concept in Fusarium with reference to section Martiella. Am J Bot 28:738–742CrossRef
  Stucky BJ (2012) SeqTrace: a graphical tool for rapidly processing DNA sequencing chromatograms. J Biomol Tech 23:90–93PubMedCentral CrossRef PubMed
  Swofford DL (2002) PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland
  Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739PubMedCentral CrossRef PubMed
  Triest D, Stubbe D, De Cremer K, Pierard D, Detandt M, Hendrickx M (2015) Banana infecting fungus, Fusarium musae, is also an opportunistic human pathogen: are banana potential carriers and source of fusariosis? Mycologia 107:46–53CrossRef PubMed
  Van Burik J, Magee PT (2001) Aspects of fungal pathogenesis in humans. Annu Rev Microbiol 55:743–772CrossRef PubMed
  VanEtten HD (1978) Identification of additional habitats of Nectria haematococca mating population VI. Phytopathology 68:1552–1556CrossRef
  VanEtten HD, Kistler HC (1988) Nectria haematococca mating populations I and VI. In: Sidhu GS (ed) Advances in plant pathology. Academic Press, New York, pp 189–206
  Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M et al (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407–4414PubMedCentral CrossRef PubMed
  Yang XB, Feng F (2001) Ranges and diversity of soybean fungal diseases in North America. Phytopathology 91:769–775CrossRef PubMed
  Zhang N, O’Donnell K, Sutton DA, Nalim FA, Summerbell RC, Padhye AA, Geiser DM (2006) Members of the Fusarium solani species complex that cause infections in both humans and plants are common in the environment. J Clin Microbiol 44:2186–2190PubMedCentral CrossRef PubMed
  
• 作者单位：P. Chitrampalam (1)
  B. Nelson Jr (1)
  
  1. Department of Plant Pathology, North Dakota State University, Fargo, ND, 58108, USA
  
• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Life Sciences
  Microbiology
  Medical Microbiology
  Plant Sciences
  Soil Science and Conservation
  
• 出版者：Springer Netherlands
• ISSN：1572-9699

文摘

The Fusarium solani species complex (FSSC) includes important root pathogens of soybean in the United States, but the evolutionary lineages associated with soybean root rot are unknown. A multilocus phylogeny based on 93 isolates from soybean and pea roots from North Dakota and Minnesota revealed that root rot was associated with three known phylogenetic species, FSSC 3 + 4 (=Fusarium falciforme) (3 % of isolates), FSSC 5 (60 %), FSSC 11 (34 %), and one unknown species, FSSC X (2 %). Of these species FSSC 5 and FSSC 3 + 4 are clinically important while FSSC 11 is a plant pathogen. Isolates from FSSC 11 were pathogenic on soybean, dry bean, pea and lentil, and did not grow at 37 °C. However, isolates from FSSC 5 were weakly to non-pathogenic, but grew at 37 °C. Isolates from both FSSC 5 and FSSC 11 were highly resistant to fludioxonil in vitro. This is the first study revealing the pathogenic robustness of FSSC 11 in causing root rot among Fabaceae crops and also the association of clinically important members of the FSSC with roots of a widely grown field crop in the United States. Keywords Root rot Fusarium solani species complex Soybean Phylogenetic species