Morphological and Molecular Differentiation of Sporidiobolus johnsonii ATCC 20490 and Its Coenzyme Q10 Overproducing Mutant Strain UF16
详细信息    查看全文
  • 作者:Prafull Ranadive (1)
    Alka Mehta (2)
    Yashwant Chavan (3)
    Anbukayalvizhi Marx (1)
    Saji George (1)
  • 关键词:Sporidiobolus johnsonii ; Coenzyme Q10 ; Mutant ; RAPD ; Strain improvement ; Atorvastatin ; Free radical ; Mutation
  • 刊名:Indian Journal of Microbiology
  • 出版年:2014
  • 出版时间:September 2014
  • 年:2014
  • 卷:54
  • 期:3
  • 页码:343-357
  • 全文大小:
  • 参考文献:1. Jeya M, Moon HJ, Lee JL, Kim IW, Lee JK (2010) Current state of coenzyme Q10 production and its application. Appl Microbiol Biotechnol 85:1653-663 CrossRef
    2. Cluis CP, Pinel D, Martin VJJ (2012) The production of coenzyme Q10 in microorganisms. Reprogramming microbial metabolic pathways Edited By X Wang. doi: 10.1007/978-94-007-5055-5_15
    3. Littarru G (2007) Bioenergetic and antioxidant properties of coenzyme Q10: recent developments. Mol Biotechnol 37:31 CrossRef
    4. Choi JH, Ryu YW, Seo JH (2005) Biotechnological production and applications of Coenzyme Q10. Appl Microbiol Biotechnol 68:9-5 CrossRef
    5. Ravada SR, Emani LR, Garaga MR, Meka B, Golakoti T (2009) Synthesis of coenzyme Q10. Amer J Infect Dis 5:83-9 CrossRef
    6. Wu Y, Chen B, Zhen G, Zhu Y (2013) Fermentation method for producing co-enzyme Q10. US Patent 0302862
    7. Cluis CP, Ekins A, Narcross L, Jiang H, Gold ND, Burja AM, Martin VJ (2011) Identification of bottlenecks in / Escherichia coli engineered for the production of CoQ10. Metab Eng 13:733-44
    8. Kawamukai M (2009) Biosynthesis and bioproduction of coenzyme Q10 by yeasts and other organisms. Biotechnol Appl Biochem 53:217-26 CrossRef
    9. Huang M, Wang Y, Liu J, Mao Z (2011) Multiple strategies for metabolic engineering of / Escherichia coli for efficient production of coenzyme Q10. Chin J Chem Eng 19:316-26
    10. Cluis CP, Burja AM, Martin VJJ (2007) Current prospects for the production of coenzyme Q10 in microbes. Trends Biotechnol 25:514-21 CrossRef
    11. Gu SB, Yao JM, Yuan QP, Xue PJ, Zheng ZM, Wang L, Yu ZL (2006) A novel approach for improving the productivity of ubiquinone-10 producing strain by low-energy ion beam irradiation. Appl Microbiol Biotechnol 72:456-61 CrossRef
    12. Kien NB, Kong I, Lee M, Kim JK (2010) Coenzyme Q10 production in a 150-l reactor by a mutant strain of / Rhodobacter sphaeroides. J Ind Microbiol Biotechnol 37:521-29 CrossRef
    13. Yuan Y, Tian Y, Yue T (2012) Improvement of coenzyme Q10 production: Mutagenesis induced by high hydrostatic pressure treatment and optimization of fermentation conditions. J Biomed Biotechnol. doi: 10.1155/2012/607329
    14. Yoshida H, kotani v, Ochiai K, Araki K (1998) Production of ubiquinone-10 using bacteria. J Gen Appl Microbiol 44:19-6 CrossRef
    15. Nakao Y, Kitano K, Imada I, Morimoto H (1978) Method of producing ubiquinone-10. US Patent 4070244
    16. Dixson DD, Boddy CN, Doyle RP (2011) Reinvestigation of coenzyme Q10 isolation from / Sporidiobolus johnsonii. Chem Biodivers 8:1033-051 CrossRef
    17. Ranadive P, Mehta A, George S (2011) Strain improvement of / Sporidiobolus johnsonii ATCC 20490 for biotechnological production of coenzyme Q10. Int J Chem Eng Appl 2:216-20
    18. Maciejak A, Leszczynska A, Warchol I, Gora M, Kaminska J, Plochocka D, Wysocka-Kapcinska M, Tulacz D, Siedlecka J, Swiezewska E, Sojka M, Danikiewicz W, Odolczyk N, Szkopinska A, Sygitowicz G, Burzynska B (2013) The effects of statins on the mevalonic acid pathway in recombinant yeast strains expressing human HMG-CoA reductase. BMC Biotechnol 13:68 CrossRef
    19. Rowlands RT (1984) Industrial strain improvement: rational screens and genetic recombination techniques. Enzym Microb Technol 8:290-00 CrossRef
    20. Rowlands RT (1984) Industrial strain improvement: mutagenesis and random screening procedures. Enzym Microb Technol 6:3-0 CrossRef
    21. Rao RS, Jyothi CP, Prakasham RS, Rao CS, Sarma PN, Rao LV (2006) Strain improvement of / Candida tropicalis for the production of xylitol: biochemical and physiological characterization of wild-type and mutant strain CT-OMV5. J Microbiol 44:113-20
    22. Schlick A, Kuhls K, Meyer W, Lieckfeldt E, Borner T, Messner K (1994) Fingerprinting reveals gamma-ray induced mutations in fungal DNA: implications for identification of patent strains of / Trichoderma hazianum. Curr Genet 26:74-8 CrossRef
    23. Cardoso PG, Queiroz MV, Pereira OL, Araujo EF (2007) Morphological and molecular differentiation of the pectinase producing fungi / Penicillium expansum and / Penicillium griseoroseum. Braz J Microbiol 38:71-7 CrossRef
    24. Soares-Ramos JRL, Ramos HJO, Cruz LM, Chubatsu LS, Pedrosa FO, Rigo LU, Souza EM (2003) Comparative molecular analysis of / Herbaspirillium strains by RAPD, RFLP and 16S rDNA sequencing. Genet Mol Biol 26:537-43 CrossRef
    25. Aparajita S, Rout GR (2010) Molecular analysis of / Albizia species using AFLP markers for conservation strategies. J Genet 89:95-9 CrossRef
    26. Thakur R, Sandhu SS (2010) Species confirmation of fungal isolates by molecular analysis. Indian J Microbiol 50:280-91 CrossRef
    27. Lee MH, Tzeng DD, Hsu FS (2006) Photodynamic effects of methionine-riboflavin mixture on antioxidant proteins. Plant Pathol Bull 15:17-4
    28. Harrigan WF (1998) Laboratory methods in food microbiology, 3rd edn. Academic Press, San Diego
    29. Kurtzman CP, Fell JW, Boekhout T, Robert V (2011) Methods for isolation, phenotypic characterization and maintenance of yeasts. In: Kurtzman CP, Fell JW, Boekhout T (eds) The yeasts, a taxonomic study, 5th edn. Elsevier, Amsterdam, pp 87-10. doi:10.1016/B978-0-444-52149-1.00007-0 CrossRef
    30. Laffin RJ, Cutter VM (1959) Investigations on the life cycle of / Sporidiobolus johnsonii. J Mitchell Soc 75:89-00
    31. Thakur R, Sandhu SS (2002) A simple and economical method for isolation of fungal genomic DNA. J Basic Appl Mycol 1:92-4
    32. Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG (2007) Clustal W and Clustal X version 2.0. Bioinformatics (Oxford, England) 23(21):2947-948. doi: 10.1093/bioinformatics/btm404
    33. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-739
    34. Sneath PHA, Sokal RR (1973) Numerical taxonomy. Freeman, San Francisco
    35. Tamura K, Nei M, Kumar S (2004) Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc Natl Acad Sci USA 101:11030-1035 CrossRef
    36. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-91 CrossRef
    37. Adrio JL, Demain AL (2006) Genetic improvements of processes yielding microbial products. FEMS Microbiol Rev 30:187-14 CrossRef
    38. Tzeng DD, Lee MH (1989) Production of hydroxyl radicals in photodynamic action of methionine riboflavin mixture: a consequence of iron catalyzed Haber–Weiss reaction. Bot Bull Academia Sinica 30:171-78
    39. Dimitrova S, Pavlova K, Lukanov L, Korotkova E, Petrova E, Zagorchev P, Kuncheva M (2012) Production of metabolites with antioxidant and emulsifying properties by Antarctic strain / Sporobolomyces salmonicolor AL1. Appl Biochem Biotechnol. doi: 10.1007/s12010-12-9983-2
    40. Pfaller R, Leonhartsberger S (2004) Process for producing / Sporidiobolus ruineniae strains with improved coenzyme Q10 production. US Patent 0209368
    41. Tzeng DD, Lee MH, Chung KR, DeVay JE (1990) Products in light-mediated reactions of free methionine-riboflavin mixtures that are biocidal to microorganisms. Canadian J Microbiol 36:500-05 CrossRef
    42. Allen JF, Raven JA (1996) Free-radical-induced mutation vs redox regulation: costs and benefits of genes in organelles. J Mol Evol 42:482-92 CrossRef
    43. Callegari S, Mckinnon RA, Andrews S, Barros Lopes MA (2010) Atorvastatin-induced cell toxicity in yeast is linked to disruption of protein isoprenylation. FEMS Yeast Res 10:188-98 CrossRef
    44. Kawamukai M (2002) Biosynthesis, bioproduction and novel roles of ubiquinone. J Biosci Bioeng 94:511-17
    45. Galgoczy L, Nyilasi I, Papp T, Vagvogyi C (2011) Statins as antifungal agents. World J Clin Infect Dis 1:4-0 CrossRef
    46. Cheng B, Yuan Q, Sun X, Li W (2010) Enhanced production of coenzyme Q10 by over expressing HMG-CoA reductase and induction with arachidonic acid in / Schizosaccharomyces pombe. Appl Biochem Biotechnol 160:523-31 CrossRef
    47. Sakato K, Tanaka H, Shibata S, Kuratsu Y (1992) Agitation-aeration studies on coenzyme Q10 production using / Rhodopseudomonas sphaeroides. Biotechnol Appl Biochem 16:19-2
    48. Fell JW, Tallman AS (1981) Heterothallism in the basidiomycetous yeast genus / Sporidiobolus?Nyland. Curr Microbiol 5:77-2 CrossRef
    49. Tallman AS, Fell JW (1998) / Sporidiobolus Nyland. In: Kurtzman CP, Fell JW (eds) The yeasts, a taxonomic study, 4th edn. Elsevier, Amsterdam
    50. Kurtzman CP, Fell JW, Boekhout T (2011) Gene sequence analyses and other DNA-based methods for yeast species recognition. In: Kurtzman CP, Fell JW, Boekhout T (eds) The yeasts, A taxonomic study, 5th edn. Elsevier, Amsterdam, pp 137-44. doi:10.1016/B978-0-444-52149-1.00010-0 CrossRef
    51. Kurtzman CP (2011) Recognition of yeast species from gene sequence comparisons. Open Appl Inform J 5:20-9 CrossRef
    52. Ramalivhana JN, Obi CL, Samie A, Labuschagne C, Weldhagen GF (2010) Random amplified polymorphic DNA typing of clinical and environmental / Aeromonas hydrophila strains from Limpopo province. South Africa. J Health Popul Nutr 28:1-
    53. Nei M, Li W (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 76:5269-273 CrossRef
    54. Nagee A, Mukhopadhyaya PN, Kothari IL (2003) Multiple arbitrary amplicon profiling of / Trichoderma species known for their potential as biocontrol agents against plant pests. J Mycol Plant Pathol 33:195-99
    55. Herzerberg M, Fischr R, Titze A (2002) Conflicting results obtained by RAPD-PCR and large-subunit rDNA sequences in determining and comparing yeast strains isolated from flowers: a comparison of two methods. Int J Syst Evol Microbiol 52:1423-433 CrossRef
    56. Zhang J, Wang X, Diao J, He H, Zhang Y, Xiang W (2013) Streptomycin resistance-aided genome shuffling to improve doramectin productivity of / Streptomyces avermitilis NEU1069. J Ind Microbiol Biotechnol 40:877-89 CrossRef
    57. Schlick A, Kuhls K, Meyer W, Lieckfeldt E, Borner T, Messner K (1994) Fingerprinting reveals gamma-ray induced mutations in fungal DNA: implications for identification of patent strains of / Trichoderma hazianum. Curr Genet 26:74-8 CrossRef
    58. Kim JH, Kim SH, Yoon JH, Lee PC (2014) Carotenoid production from / n-alkanes with a broad range of chain lengths by the novel species / Gordonia ajoucoccus A2T. Appl Microbiol Biotechnol. doi 10.1007/s00253-014-5516-y
    59. Carvalho FL, Costa A, Goes L, Oliveira N (2001) DNA polymorphism and total protein in mutants of / Metarhizium anisopliae strain E9. Braz J Microbiol 32:93-7
    60. Lescuyer P, Picot S, Bracchi V, Burnod J, Austin J, Perard A, Thomas P (1997) Detection of RAPD markers correlated with chloroquine resistance in / Plasmodium falciparum. Genome Res 7:747-53
    61. Sartori D, Massi FP, Ferranti LS, Fungaro MHP (2014) Identification of genes differentially expressed between Ochratoxin producing and non-producing strains of / Aspergillus westerdijkiae. Indian J Microbiol 54:41-5 CrossRef
  • 作者单位:Prafull Ranadive (1)
    Alka Mehta (2)
    Yashwant Chavan (3)
    Anbukayalvizhi Marx (1)
    Saji George (1)

    1. Fermentation Technology Lab, Natural Products Department, Piramal Enterprises Limited, Nirlon Complex, Off Western Express Highway, Goregaon (East), Mumbai, 400063, India
    2. School of Bio Science and Technology, VIT University, Vellore, 632014, Tamil Nadu, India
    3. geneOmbio Technologies Private Limited, Baner, Pune, 411045, Maharashtra, India
  • ISSN:0973-7715
文摘
Coenzyme Q10 (CoQ10) is an industrially important molecule having nutraceutical and cosmeceutical applications. CoQ10 is mainly produced by microbial fermentation and the process demands the use of strains with high productivity and yields of CoQ10. During strain improvement program consisting of sequential induced mutagenesis, rational selection and screening process, a mutant strain UF16 was generated from Sporidiobolus johnsonii ATCC 20490 with 2.3-fold improvements in CoQ10 content. EMS and UV rays were used as mutagenic agents for generating UF16 and it was rationally selected based on atorvastatin resistance as well as survival at free radicals exposure. We investigated the genotypic and phenotypic changes in UF16 in order to differentiate it from wild type strain. Morphologically it was distinct due to reduced pigmentation of colony, reduced cell size and significant reduction in mycelial growth forms with abundance of yeast forms. At molecular level, UF16 was differentiated based on PCR fingerprinting method of RAPD as well as large and small-subunit rRNA gene sequences. Rapid molecular technique of RAPD analysis using six primers showed 34?% polymorphic fragments with mean genetic distance of 0.235. The partial sequences of rRNA-gene revealed few mutation sites on nucleotide base pairs. However, the mutations detected on rRNA gene of UF16 were less than 1?% of total base pairs and its sequence showed 99?% homology with the wild type strain. These mutations in UF16 could not be linked to phenotypic or genotypic changes on CoQ10 biosynthetic pathway that resulted in improved yield. Hence, investigating the mutations responsible for deregulation of CoQ10 pathway is essential to understand the cause of overproduction in UF16. Phylogenetic analysis based on RAPD bands and rRNA gene sequences coupled with morphological variations, exhibited the novelty of mutant UF16 having potential for improved CoQ10 production.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700