Differential responses of Oryza sativa secondary metabolism to biotic interactions with cooperative, commensal and phytopathogenic bacteria

详细信息    查看全文

• 作者：Amel Chamam ; Florence Wisniewski-Dyé ; Gilles Comte ; Cédric Bertrand…
• 关键词：Commensalism ; Cooperation ; Flavonoids ; Hydroxycinnamic acid ; Parasitism ; Rice secondary metabolite profiling
• 刊名：Planta
• 出版年：2015
• 出版时间：December 2015
• 年：2015
• 卷：242
• 期：6
• 页码：1439-1452
• 全文大小：988 KB
• 参考文献：Bais HP, Weir TL, Perry LG, Gilroy S, Vivanco JM (2006) The role of root exudates in rhizosphere interactions with plants and other organisms. Annu Rev Plant Biol 57:233-66CrossRef PubMed <br>Bednarek P, Pi?lewska-Bednarek M, Svato? A, Schneider B, Doubsky J, Mansurova M et al (2009) A glucosinolate metabolism pathway in living plant cells mediates broad-spectrum antifungal defense. Science 323:101-06CrossRef PubMed <br>Bennett RN, Wallsgrove RM (1994) Tansley Review No. 72. Secondary metabolites in plant defence mechanisms. New Phytol 127:617-33CrossRef <br>Berg G, Smalla K (2009) Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere. FEMS Microbiol Ecol 68:1-3CrossRef PubMed <br>Berger S, Sinha AK, Roitsch T (2007) Plant physiology meets phytopathology: plant primary metabolism and plant–pathogen interactions. J Exp Bot 58:4019-026CrossRef PubMed <br>Besson E, Dellamonica G, Chopin J, Markham KR, Kim M, Koh H-S, Fukami H (1985) C-glycosylflavones from Oryza sativa. Phytochemistry 24:1061-064CrossRef <br>Brazier-Hicks M, Evans KM, Gershater MC, Puschmann H, Steel PG, Edwards R (2009) The C-glycosylation of flavonoids in cereals. J Biol Chem 284:17926-7934PubMed Central CrossRef PubMed <br>Camilios-Neto D, Bonato P, Wassem R, Tadra-Sfeir MZ, Brusamarello-Santos LCC, Valdameri G, Donatti L, Faoro H, Weiss VA, Chubatsu LS, Pedrosa FO, Souza EM (2014) Dual RNA-seq transcriptional analysis of wheat roots colonized by Azospirillum brasilense reveals up-regulation of nutrient acquisition and cell cycle genes. BMC Genomics 15:378PubMed Central CrossRef PubMed <br>Chamam A, Sanguin H, Bellvert F, Meiffren G, Comte G, Wisniewski-Dyé F, Bertrand C, Prigent-Combaret C (2013) Plant secondary metabolite profiling evidences strain-dependent effect in the Azospirillum-em class="EmphasisTypeItalic">Oryza sativa association. Phytochemistry 87:65-7CrossRef PubMed <br>Clay NK, Adio AM, Denoux C, Jander G, Ausubel FM (2009) Glucosinolate metabolites required for an Arabidopsis innate immune response. Science 323:95-01PubMed Central CrossRef PubMed <br>Coleman HD, Park J-Y, Nair R, Chapple C, Mansfield SD (2008) RNAi-mediated suppression of p-coumaroyl-CoA 3-hydroxylase in hybrid poplar impacts lignin deposition and soluble secondary metabolism. Proc Natl Acad Sci USA 105:4501-506PubMed Central CrossRef PubMed <br>Couillerot O, Ramírez-Trujillo A, Walker V, von Felten A, Jansa J, Maurhofer M, Défago G, Prigent-Combaret C, Comte G, Caballero-Mellado J, Mo?nne-Loccoz Y (2013) Comparison of prominent Azospirillum strains in Azospirillum-em class="EmphasisTypeItalic">Pseudomonas-em class="EmphasisTypeItalic">Glomus consortia for promotion of maize growth. Appl Microbiol Biotechnol 97:4639-649CrossRef PubMed <br>Dandie CE, Larrainzar E, Mark GL, O’Gara F, Morrissey JP (2005) Establishment of DsRed. T3_S4T as an improved autofluorescent marker for microbial ecology applications. Environ Microbiol 7:1818-825CrossRef PubMed <br>De Ascensao ARDCF, Dubery IA (2000) Panama disease: cell wall reinforcement in Banana roots in response to elicitors from Fusarium oxysporum f. sp. cubense race four. Phytopathology 90:1173-180CrossRef PubMed <br>Delgado NJ, Casler MD, Grau CR, Jung HG (2002) Reactions of smooth bromegrass clones with divergent lignin or etherified ferulic acid concentration to three fungal pathogens. Crop Sci 42:1824-831CrossRef <br>Drogue B, Sanguin H, Borland S, Prigent-Combaret C, Wisniewski-Dye F (2014) Genome wide profiling of Azospirillum lipoferum 4B gene expression during interaction with rice roots. FEMS Microbiol Ecol 87:543-55CrossRef PubMed <br>Edreva AV, Velikova T, Tsonev T, Dagnon S, Gurel A, Atkas L, Gesheva E (2008) Stress protective role of secondary metabolites: diversity of functions and mechanisms. Gen Appl Plant Physiol 34:67-8 <br>El Zemrany H, Czarnes S, Hallett P, Alamercery S, Bally R, Jocteur-Monrozier L (2007) Early changes in root characteristics of maize (Zea mays) following seed inoculation with the PGPR Azospirillum lipoferum CRT1. Plant Soil 291:109-18CrossRef <br>El-Khawas H, Adachi K (1999) Identification and quantification of auxins in culture media of Azospirillum and Klebsiella and their effect on rice. Biol Fertil Soils 28:377-81CrossRef <br>Ferreres F, Andrade PB, Valent?o P, Gil-Izquierdo A (2008) Further knowledge on barley (Hordeum vulgare L.) leaves O-glycosyl-C-glycosyl flavones by liquid chromatography–UV diode-array detection–electrospray ionisation mass spectrometry. J Chromatogr A 1182:56-4CrossRef PubMed <br>Freeman BC, Beattie GA (2008) An overview of plant defenses against pathogens and herbivores. Plant Health Instr. doi:10.-094/?PHI-I-2008-0226-01 <br>Grayer RJ, Kokubun T (2001) Plant-fungal interactions: the search for phytoalexins and other antifungal compounds from higher plants. Phytochemistry 56:253-63CrossRef PubMed <br>Hartmann T (2007) From waste products to ecochemicals: fifty
• 作者单位：Amel Chamam (1) (2) (4) <br> Florence Wisniewski-Dyé (1) (2) <br> Gilles Comte (1) (2) <br> Cédric Bertrand (3) <br> Claire Prigent-Combaret (1) (2) <br><br>1. UMR CNRS 5557 Ecologie Microbienne, Université Lyon 1, 43 Bd du 11 Novembre 1918, 69622, Villeurbanne Cedex, France <br> 2. Université de Lyon, 69622, Lyon, France <br> 4. Unité de Recherche Clinique Lariboisière-Saint Louis, 200, rue du Faubourg Saint-Denis, 75010, Paris, France <br> 3. Laboratoire de Chimie des Biomolécules et de l’Environnement EA 4215, Université de Perpignan, Via Domitia, 66860, Perpignan, France <br>
• 刊物主题：Plant Sciences; Agriculture; Ecology; Forestry;
• 出版者：Springer Berlin Heidelberg
• ISSN：1432-2048

文摘

Main conclusion Profiling of plant secondary metabolite allows to differentiate the different types of ecological interactions established between rice and bacteria. Rice responds to ecologically distinct bacteria by altering its content of flavonoids and hydroxycinnamic acid derivatives. Plants-growth and physiology are strongly influenced by the biotic interactions that plants establish with soil bacterial populations. Plants are able to sense and to respond accordingly to ecologically distinct bacteria, by inducing defense pathways against pathogens to prevent parasitic interactions, and by stimulating the growth of root-associated beneficial or commensal bacteria through root exudation. Plant secondary metabolism is expected to play a major role in this control. However, secondary metabolite responses of a same plant to cooperative, commensal and deleterious bacteria have so far never been compared. The impact of the plant growth-promoting rhizobacteria (PGPR) Azospirillum lipoferum 4B on the secondary metabolite profiles of two Oryza sativa L. cultivars (Cigalon and Nipponbare) was compared to that of a rice pathogen Burkholderia glumae AU6208, the causing agent of bacterial panicle blight and of a commensal environmental bacteria Escherichia coli B6. Root and shoot rice extracts were analyzed by reversed-phase high-performance liquid chromatography (RP-HPLC). Principal component analyses (PCAs) pinpointed discriminant secondary metabolites, which were characterized by mass spectrometry. Direct comparison of metabolic profiles evidenced that each bacterial ecological interaction induced distinct qualitative and quantitative modifications of rice secondary metabolism, by altering the content of numerous flavonoid compounds and hydroxycinnamic acid (HCA) derivatives. Secondary metabolism varied according to the cultivars and the interaction types, demonstrating the relevance of secondary metabolic profiling for studying plant–bacteria biotic interactions.