A new tobamovirus infecting tomato crops in Jordan

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• 作者：N. Salem ; A. Mansour ; M. Ciuffo ; B. W. Falk ; M. Turina
• 刊名：Archives of Virology
• 出版年：2016
• 出版时间：February 2016
• 年：2016
• 卷：161
• 期：2
• 页码：503-506
• 全文大小：473 KB
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• 作者单位：N. Salem (1)
  A. Mansour (1)
  M. Ciuffo (2)
  B. W. Falk (3)
  M. Turina (2)
  
  1. Department of Plant Protection, Faculty of Agriculture, The University of Jordan, Amman, 11942, Jordan
  2. Istituto per la Protezione Sostenibile delle Piante, Sez. di Torino, CNR, Strada delle Cacce 73, 10135, Turin, Italy
  3. Department of Plant Pathology, University of California, Davis, CA, 95616, USA
  
• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Biomedicine
  Virology
  Medical Microbiology
  Infectious Diseases
  
• 出版者：Springer Wien
• ISSN：1432-8798

文摘

In this study, we completed the whole genome sequence of a new tobamovirus isolated from tomato plants grown in greenhouses in Jordan during the spring of 2015. The 6393-nt single-stranded RNA (ssRNA) genome encodes four proteins, as do other tobamoviruses: two replication-related proteins of 126 kDa and 183 kDa, a 30-kDa movement protein (MP) and a 17.5-kDa coat protein (CP). Phylogenetic analysis showed that this virus does not group with either the tomato mosaic virus (ToMV) or the tobacco mosaic virus (TMV) clades. Instead, it stems from a branch leading to the TMV clade. Analysis of possible recombination events between this virus and representative isolates of closely related tomato-infecting tobamoviruses showed that at least one region originated by recombination. We provide evidence that we have identified a new tobamovirus, for which we propose the name “tomato brown rugose fruit virus”. Electronic supplementary materialThe online version of this article (doi:10.​1007/​s00705-015-2677-7) contains supplementary material, which is available to authorized users.