Viral sanitary status of declining grapevine Syrah clones and genetic diversity of Grapevine Rupestris stem pitting-associated virus

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• 作者：M. Beuve (1) (2)
  B. Moury (3)
  A.-S. Spilmont (4)
  L. Sempé-Ignatovic (4)
  C. Hemmer (1) (2)
  O. Lemaire (1) (2)
  
• 关键词：Grapevine viruses ; Etiology ; Betaflexiviridae ; French Syrah clones ; Grapevine Syrah virus ; 1 ; Sequence analyses
• 刊名：European Journal of Plant Pathology
• 出版年：2013
• 出版时间：February 2013
• 年：2013
• 卷：135
• 期：2
• 页码：439-452
• 全文大小：532KB
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• 作者单位：M. Beuve (1) (2)
  B. Moury (3)
  A.-S. Spilmont (4)
  L. Sempé-Ignatovic (4)
  C. Hemmer (1) (2)
  O. Lemaire (1) (2)
  
  1. INRA, UMR 1131, Santé de la Vigne et Qualité du Vin, 68021, Colmar, France
  2. UDS, Université de Strasbourg, UMR 1131 Santé de la Vigne et Qualité du Vin, 68021, Colmar, France
  3. INRA, UR407, Pathologie Végétale, 84140, Montfavet, France
  4. IFV, Institut Fran?ais de la Vigne et du Vin, Domaine de l’Espiguette, 30240, Le Grau-Du-Roi, France
  
• ISSN：1573-8469

文摘

In order to determine the etiology of Syrah decline, virus detection was performed on 22 Syrah clones, chosen for their various levels of sensitivity to Syrah decline. All clones, including the sensitive ones, were free of 20 main grapevine viruses. In contrast, Grapevine Syrah virus-1 and Grapevine Rupestris stem pitting-associated virus (GRSPaV), were detected in 56?% and 100?% of the analysed Syrah clones respectively. This is the first report of GSyV-1 in a French vineyard. The genetic diversity of a 380 nt region within the GRSPaV coat protein gene was studied extensively in vines differing in their sensitivity to Syrah decline. Most GRSPaV variants were scattered between the four phylogenetic groups previously identified; 65?% of the sequences analysed were found to belong to the GRSPaV—group 1, 22?% to—group 2b, 10?% to—group 2a and 2?% to—group 3. Seventy percent of the 31 plants analysed harboured mixtures of genomic variants. Statistical analyses revealed no significant correlation between sensitivity and GRSPaV sequence variation. This suggests that GRSPaV is not the direct etiological agent of the Syrah decline.