Full-length M and L RNA sequences of tospovirus isolate 2009-GZT, which causes necrotic ringspot on tomato in China

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• 作者：Kuanyu Zheng ; Hongguang Liu ; Yueyan Yin ; Tsung-Chi Chen…
• 刊名：Archives of Virology
• 出版年：2016
• 出版时间：May 2016
• 年：2016
• 卷：161
• 期：5
• 页码：1411-1414
• 全文大小：372 KB
• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Biomedicine
  Virology
  Medical Microbiology
  Infectious Diseases
  
• 出版者：Springer Wien
• ISSN：1432-8798
• 卷排序：161

文摘

The virus isolate 2009-GZT, collected from tomato in Guizhou province of China, was identified as a new member of the genus Tospovirus based on its S RNA sequence. Because its provisional name, “tomato necrotic spot virus” (TNSV), was identical to an already existing member of the genus Ilarvirus, 2009-GZT was renamed “tomato necrotic spot-associated virus” (TNSaV). In this study, the full-length sequences of the genomic M and L RNAs of TNSaV were determined and analyzed. The M RNA has 4,773 nucleotides (nt), encoding the NSm protein of 309 aa (34.4 kDa) in the viral (v) strand and the glycoprotein precursor (Gn/Gc) of 1123 aa (128 kDa) in the viral complementary (vc) strand. The NSm and Gn/Gc of TNSaV share the highest aa sequence identity (86.2 % and 86.9 %, respectively) with those of tomato zonate spot virus. The L RNA contains 8,908 nt and codes for the putative RNA-dependent RNA polymerase (RdRp) of 2885 aa (332 kDa) in the vc strand. The RdRp of TNSaV shares the highest aa sequence identity (85.2 %) with that of calla lily chlorotic spot virus (CCSV). Serological assays showed that TNSaV cross-reacts with rabbit antisera against watermelon silver mottle virus (WSMoV) NP and CCSV NP, indicating that TNSaV is a member of the WSMoV serogroup.K. Zheng and H. Liu contributed equally to this study.Electronic supplementary materialThe online version of this article (doi:10.1007/s00705-016-2788-9) contains supplementary material, which is available to authorized users.