Infringement of Individual Privacy via Mining Differentially Private GWAS Statistics
详细信息    查看全文
  • 刊名:Lecture Notes in Computer Science
  • 出版年:2016
  • 出版时间:2016
  • 年:2016
  • 卷:9784
  • 期:1
  • 页码:355-366
  • 全文大小:285 KB
  • 参考文献:1.Erlich, Y., Narayanan, A.: Routes for breaching and protecting genetic privacy. Nat. Rev. Genet. 15(6), 409–421 (2014)CrossRef
    2.Greenbaum, D., Gerstein, M.: Genomic anonymity: have we already lost it? Am. J. Bioeth. 8(10), 71–74 (2008)CrossRef
    3.Greenbaum, D., Gerstein, M.: Social networking and personal genomics: suggestions for optimizing the interaction. Am. J. Bioeth. 9(6–7), 15–19 (2009)CrossRef
    4.Greenbaum, D., Sboner, A., Mu, X.J., Gerstein, M.: Genomics and privacy: implications of the new reality of closed data for the field. PLoS Comput. Biol. 7(12), e1002278 (2011)CrossRef
    5.The Health Insurance Portability and Accountability Act of 1996 (HIPAA). http://​www.​hhs.​gov/​hipaa/​
    6.Shi, X., Wu, X.: Genetic privacy: risks, ethics, and protection techniques. In: The Workshop on Data Science Learning and Applications to Biomedical and Health Sciences, pp. 57–62, New York, NY (2016)
    7.Homer, N., Szelinger, S., Redman, M., Duggan, D., Tembe, W., Muehling, J., Pearson, J.V., Stephan, D.A., Nelson, S.F., Craig, D.W.: Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays. PLoS Genet. 4(8), e1000167 (2008)CrossRef
    8.Masca, N., Burton, P.R., Sheehan, N.A.: Participant identification in genetic association studies: improved methods and practical implications. Int. J. Epidemiol. 40(6), 1629–1642 (2011)CrossRef
    9.Wang, R., Li, Y.F., Wang, X., Tang, H., Zhou, X.: Learning your identity and disease from research papers: information leaks in genome wide association study. In: 16th ACM Conference on Computer and Communications Security, pp. 534–544. ACM (2009)
    10.Zhou, X., Peng, B., Li, Y.F., Chen, Y., Tang, H., Wang, X.F.: To release or not to release: evaluating information leaks in aggregate human-genome data. In: Atluri, V., Diaz, C. (eds.) ESORICS 2011. LNCS, vol. 6879, pp. 607–627. Springer, Heidelberg (2011)CrossRef
    11.Gymrek, M., McGuire, A.L., Golan, D., Halperin, E., Erlich, Y.: Identifying personal genomes by surname inference. Science 339(6117), 321–324 (2013)CrossRef
    12.Wang, Y., Wu, X., Shi, X.: Using aggregate human genome data for individual identification. In,: IEEE International Conference on Bioinformatics and Biomedicine, pp. 410–415. IEEE, Shenzhen, China (2013)
    13.Hindorff, L.A., MacArthur, J., Morales, J., Junkins, H.A., Hall, P.N., Klemm, A.K., Manolio, T.A.: A Catalog of Published Genome-wide Association Studies. http://​www.​genome.​gov/​gwastudies
    14.Fienberg, S.E., Slavkovic, A., Uhler, C.: Privacy preserving GWAS data sharing. In: 11th International Conference on Data Mining Workshops, pp. 628–635. IEEE (2011)
    15.Johnson, A., Shmatikov, V.: Privacy-preserving data exploration in genome-wide association studies. In: 19th ACM International Conference on Knowledge Discovery and Data Mining, pp. 1079–1087. ACM, Chicago, IL (2013)
    16.Dwork, C., McSherry, F., Nissim, K., Smith, A.: Calibrating noise to sensitivity in private data analysis. In: Halevi, S., Rabin, T. (eds.) TCC 2006. LNCS, vol. 3876, pp. 265–284. Springer, Heidelberg (2006)CrossRef
    17.Dwork, C.: A firm foundation for private data analysis. Commun. ACM 54(1), 86–95 (2011)CrossRef
    18.Bhaskar, R., Laxman, S., Smith, A., Thakurta, A.: Discovering frequent patterns in sensitive data. In: 16th ACM International Conference on Knowledge Discovery and Data Mining, pp. 503–512. ACM, Washington, DC (2010)
    19.Chaudhuri, K., Monteleoni, C.: Privacy-preserving logistic regression. In: 23rd Annual Conference on Neural Information Processing Systems, pp. 289–296. Citeseer, Vancouver, B.C., Canada (2008)
    20.Kifer, D., Machanavajjhala, A.: No free lunch in data privacy. In: 17th ACM International Conference on Knowledge Discovery and Data Mining, pp. 193–204. ACM, San Diego, CA (2011)
    21.Lee, J., Clifton, C.: Differential identifiability. In: 18th ACM International Conference on Knowledge Discovery and Data Mining, pp. 1041–1049. ACM, Beijing, China (2012)
  • 作者单位:Yue Wang (18)
    Jia Wen (18)
    Xintao Wu (19)
    Xinghua Shi (18)

    18. University of North Carolina at Charlotte, Charlotte, NC, USA
    19. University of Arkansas, Fayetteville, AR, USA
  • 丛书名:Big Data Computing and Communications
  • ISBN:978-3-319-42553-5
  • 刊物类别:Computer Science
  • 刊物主题:Artificial Intelligence and Robotics
    Computer Communication Networks
    Software Engineering
    Data Encryption
    Database Management
    Computation by Abstract Devices
    Algorithm Analysis and Problem Complexity
  • 出版者:Springer Berlin / Heidelberg
  • ISSN:1611-3349
  • 卷排序:9784
文摘
Individual privacy in genomic era is becoming a growing concern as more individuals get their genomes sequenced or genotyped. Infringement of genetic privacy can be conducted even without raw genotypes or sequencing data. Studies have reported that summary statistics from Genome Wide Association Studies (GWAS) can be exploited to threat individual privacy. In this study, we show that even with differentially private GWAS statistics, there is still a risk for leaking individual privacy. Specifically, we constructed a Bayesian network through mining public GWAS statistics, and evaluated two attacks, namely trait inference attack and identity inference attack, for infringement of individual privacy not only for GWAS participants but also regular individuals. We used both simulation and real human genetic data from 1000 Genome Project to evaluate our methods. Our results demonstrated that unexpected privacy breaches could occur and attackers can derive identity information and private information by utilizing these algorithms. Hence, more methodological studies should be invested to understand the infringement and protection of genetic privacy.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700