Environmental Surveillance of Polioviruses in Rio de Janeiro, Brazil, in Support to the Activities of Global Polio Eradication Initiative
详细信息 查看全文
- 作者：Joseane Simone de Oliveira Pereira…
- 关键词：Poliovirus ; Poliomyelitis ; Environmental surveillance ; Polio eradication
- 刊名：Food and Environmental Virology
- 出版年：2016
- 出版时间：March 2016
- 年：2016
- 卷：8
- 期：1
- 页码：27-33
- 全文大小：391 KB
- 参考文献：Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990). Basic local alignment search tool. Journal of Molecular Biology, 215(3), 403–410.CrossRef PubMed
Baggi, F., Demarta, A., & Peduzzi, R. (2001). Persistence of viral pathogens and bacteriophages during sewage treatment: lack of correlation with indicator bacteria. Research in Microbiology, 152, 743–751.CrossRef PubMed
Blomqvist, S., Klemola, P., Kaiialainen, S., Paananen, A., Simonen, M. L., et al. (2010). Co-circulation of coxsackieviruses A6 and A10 in hand, foot and mouth disease outbreak in Finland. Journal of Clinical Virology, 48(1), 49–54.CrossRef PubMed
Boom, R., Sol, C. J. A., Salimans, M. M. M., Jansen, C. L., et al. (1990). Rapid and simple method for purification of nucleic acid. Journal of Clinical Microbiology, 28(3), 495–503.PubMedCentral PubMed
Cann, A. J., Stanway, G., Hughes, P. J., Minor, P. D., Evans, D. M., et al. (1984). Reversion to neurovirulence of the live-attenuated Sabin type 3 oral poliovirus vaccine. Nucleic Acids Research, 12, 7787–7792.PubMedCentral CrossRef PubMed
Carvalho, L. H. F., & Weckx, L. Y. (2006). Uso universal da vacina inativada contra poliomielite. Jornal de Pediatria, 82(3), s75–s82.CrossRef
CDC. (1993). Progress toward global eradication of poliomyelitis, 1988–1991. Morbidity and mortality weekly report. Retrieved March 18, 2015, from http://www.cdc.gov/mmwr/preview/mmwrhtml/00021026.htm .
Costa, E. V. (2011). Perfil genômico dos poliovírus de origem vacinal isolados de casos de paralisias flácidas agudas, no Brasil, no período pós-eliminação dos poliovírus selvagens da Região das Américas, PHD Thesis, Fundação Oswaldo Cruz, Rio de Janeiro, pp. 103.
Dos Santos, G. P. L., Burlandy, F. M., da Costa, E. V., & da Silva, E. E. (2012). Direct detection of enterovirus genome in cell-culture negative cerebrospinal fluid from aseptic meningitis cases in Brazil. Virus Review & Research, 17(1–2), 39–43.
Dowdle, W. R., De Gourvilee, E., Kew, O. M., Pallansch, M. A., & Wood, D. J. (2003). Polio eradication: The OPV paradox. Reviews in Medical Virology, 13, 277–291.CrossRef PubMed
GPEI (2015). Wild poliovirus list. Retrieved March 18, 2015, from http://www.polioeradication.org/Dataandmonitoring/Poliothisweek/Wildpolioviruslist.aspx .
Gregio, C.R.V. (2006). Caracterização genômica de poliovírus derivado da vacina isolada a partir de amostras ambientais, PhD Thesis, Fundação Oswaldo Cruz, Rio de Janeiro, pp. 118.
Guest, S., Pilipenko, E., Sharma, K., Chumakov, K., & Roos, R. P. (2004). Molecular mechanisms of attenuation of the Sabin strain of poliovirus type 3. Journal of Virology, 78, 11097–11107.PubMedCentral CrossRef PubMed
Hovi, T. (2006). Surveillance for polioviruses. Biologicals, 34, 123–126.CrossRef PubMed
Hovi, T., Shulman, L. M., van der Avoort, H., Deshpande, J., et al. (2012). Role of environmental poliovirus surveillance in global polio eradication and beyond. Epidemiology and Infection, 140(1), 1–13.CrossRef PubMed
Huang, Q. S., Greening, G., Baker, M. G., Grimwood, K., Hewitt, J., et al. (2005). Persistence of oral polio vaccine virus after its removal from the immunization schedule in New Zealand. Lancet, 366, 396.CrossRef
IBGE (2014). Estimativas populacionais para os municípios brasileiros 2014. Tabela de estimativas por município. Retrieved December 08, 2014, from ftp.ibge.gov.br/Estimativas_de_Populacao/Estimativas_2014/estimativa_dou_2014.pdf .
Kew, O. M., Sutter, R. W., de Gourville, E. M., Dowdle, W. R., & Pallansch, M. A. (2005). Vaccine-derived polioviruses and the endgame strategy for global polio eradication. Annual Review of Microbiology, 59, 587–635.CrossRef PubMed
Khetsuariani, N., Kutateladze, T., Zangaladze, E., Shutkova, T., Peñaranda, S., et al. (2010). High degree of genetic diversity of non-polio enteroviruses identified in Georgia by environmental and clinical surveillance, 2002–2005. Journal of Medical Microbiology, 59, 1340–1347.CrossRef
Kilpatrick, D. R., Ching, K., Iber, J., Campagnoli, R., Freeman, C. J., et al. (2004). Multiplex PCR method for identifying recombinant vaccine-related polioviruses. Journal of Clinical Microbiology, 42, 4313–4315.PubMedCentral CrossRef PubMed
Kilpatrick, D. R., Nottay, B., Yang, C. F., Yang, S. J., Da Silva, E., et al. (1998). Serotype-specific identification of poliovirus by PCR using primers containing mixed-base or deoxyinosine residues at positions of codon degeneracy. Journal of Clinical Microbiology, 34(2), 352–357.
Kilpatrick, D. R., Nottay, B., Yang, C. F., Yang, S. J., Mulders, M. N., et al. (1996). Group-specific identification of poliovirus by PCR using primers containing mixed-base or deoxyinosine residues at positions of codon degeneracy. Journal of Clinical Microbiology, 34(12), 2990–2996.PubMedCentral PubMed
Kilpatrick, D. R., Yang, C. F., Ching, K., Vicent, A., Iber, J., et al. (2009). Rapid group-, serotype-, and vaccine strain-specific identification of poliovirus isolates by real-time reverse transcription-PCR using degenerate primers and probes containing deoxyinosine residues. Journal of Clinical Microbiology, 47(6), 1939–1941.PubMedCentral CrossRef PubMed
Leisinger, M., & Metzler, A. (1997). Use of sílica as a Carrier to recover and prepare waterborne enteric viruses for detecton by RT-PCR. Zentralblatt fur Hygiene und Umweltmedizin, 200, 283–296.PubMed
Lewis, G. D., & Metcalf, T. G. (1988). Polyethylene glycol precipitation for recovery of pathogenic viruses, including hepatitis A virus and human rotavirus, from oyster, water, and sediment samples. Applied and Environmental Microbiology, 54, 1983–1988.PubMedCentral PubMed
Lodder, W. J., Buisman, A. M., Rutjes, S. A., Heijne, J. C., Teunis, P. F., et al. (2012). Feasibility of quantitative environmental surveillance in poliovirus eradication strategies. Applied and Environmental Microbiology, 78(11), 3800–3805.PubMedCentral CrossRef PubMed
Macadam, A. J., Pollard, S. R., Ferguson, R., Skuce, D., Wood, D., et al. (1993). Genetic basis of attenuation of the Sabin type 2 vaccine strain of poliovirus in primates. Virology, 192, 18–26.CrossRef PubMed
Minor, P. D. (1992). The molecular biology of poliovaccines. Journal of General Virology, 73, 3065–3077.CrossRef PubMed
Minor, P. D. (2009). Vaccine-derived poliovirus (VDPV): Impact on poliomyelitis eradication. Vaccine, 27, 2649–2652.CrossRef PubMed
MS (2013). Secretaria de Vigilância em Saúde, Departamento de Vigilância Epidemiológica, Coordenação Geral do Programa Nacional de Imunizações. Informe Técnico Campanha Nacional de Vacinação contra a Poliomielite. Retrieved April 10, 2014, from http://pni.datasus.gov.br/consulta_polio_13_selecao.asp .
Mueller, E. J., Bessaud, M., Huang, Q. S., Martinez, L. C., Barril, P. A., et al. (2009). Environmental poliovirus surveillance during oral poliovirus vaccine and inactivated poliovirus vaccine use in Córdoba Province Argentina. Applied and Environmental Microbiology, 75(5), 1395–1401.PubMedCentral CrossRef PubMed
Otelea, D., Guillot, S., Furione, M., Combiescu, A. A., Balanant, J., et al. (1993). Genomic modifications in naturally occurring neurovirulent revertants of Sabin 1 polioviruses. Developments in Biologicals Standardization, 78, 33–38.
Pallansch, M. A., & Roos, R. P. (2001). Enteroviruses: Poliovirus, coxsackievirus, echovirus and newer enterovirus. In D. M. Knipe, P. M. Howley, D. E. Griffin, R. A. Lamb, M. A. Martin, B. Roizman, & S. E. Straus (Eds.), Fields virology (pp. 723–777). Philadelphia: Lippincot Williams & Wilkins.
Racaniello, V. R. (2001). Picornaviridae: The viruses and their replication. In D. M. Knipe & P. M. Howley (Eds.), Fields virology (pp. 685–723). Philadelphia: Lippincot Williams & Wilkins.
Rico-Hesse, R., Pallansch, M. A., Nottay, B. K., & Kew, O. M. (1987). Geographic distribution of wild poliovirus type 1 genotypes. Virology, 160(2), 311–322.CrossRef PubMed
Roivanem, M., Blomqvist, S., Al-Hello, H., Paananen, A., Delpeyroux, F., et al. (2010). Highly divergent neurovirulent vaccine-derived polioviruses of all three serotypes are recurrently detected in Finnish sewage. Euro Surveillance, 15(19), 19566.
Rouchaud, M. J., Lam, D. H., & Racaniello, V. R. (1995). Determinants of attenuation and temperature sensitivity in the type 1 poliovirus Sabin vaccine. Journal of Virology, 69(8), 4972–4978.
Svitkin, Y. V., Cammack, N., Minor, P. D., & Almond, J. W. (1990). Translation deficiency of the Sabin type 3 poliovirus genome: association with an attenuating mutation C472—U. Virology, 175, 103–109.CrossRef PubMed
Tatem, J. M., Weeks-Levy, C., Georgiu, A., DiMichele, S. J., Gorgacz, E. J., et al. (1992). A mutation present in the amino terminus of Sabin 3 poliovirus. Journal of Virology, 66, 3197–3294.
van Heerden, J., Ehlers, M. M., & Grabow, W. O. (2005). Detection and risk assessment of adenoviruses in swimming pool water. Journal of Applied Microbiology, 99, 1256–1264.CrossRef PubMed
Vinjé, J., Gregoricus, N., Martin, J., Gary, H. E, Jr, Caceres, V. M., et al. (2004). Isolation and characterization of circulation type 1 vaccine-derived poliovirus from sewage and stream waters in Hispaniola. The Journal of Infectious Diseases, 189(7), 1168–1175.CrossRef PubMed
Weeks-Levy, C., Tatem, J. M., DiMichele, S. J., Waterfield, W., Georgiu, A. F., & Mento, S. J. (1991). Identification and characterization of a new base substitution in the vaccine strains of Sabin 3 poliovirus. Virology, 185, 934–937.CrossRef PubMed
WHO (2003). Guidelines for environmental surveillance of poliovirus circulation. Retrieved March 15, 2015, from http://apps.who.int/iris/bitstream/10665/67854/1/WHO_V-B_03.03_eng.pdf .
WHO. (2004a). Polio laboratory manual. Geneva: World Health Organization.
WHO (2004). Polio laboratory manual, 4th ed. Retrieved March 10, 2015, from http://www.who.int/vaccines/en/poliolab/WHO-Polio-Manual-9.pdf .
Wimmer, E., Hellen, C. U. T., & Cao, X. (1993). Genetics of poliovirus. Annual Review of Genomics and Human Genetics, 27, 353–436.CrossRef
Yang, C. F., De, L., Holloway, B. P., Pallansch, M. A., & Kew, O. M. (1991). Detection and identification of vaccine-related polioviruses by the polymerase chain reaction. Virus Research, 20(2), 159–179.CrossRef PubMed
Zurbriggen, S., Tobler, K., Abril, C., Diedrich, S., Ackermann, M., et al. (2008). Isolation of sabin-like polioviruses from wastewater in a country using inactivated polio vaccine. Applied and Environmental Microbiology, 74(18), 5608–5614.PubMedCentral CrossRef PubMed - 作者单位：Joseane Simone de Oliveira Pereira (1)
Lidiane Rodrigues da Silva (1)
Amanda de Meireles Nunes (1)
Silas de Souza Oliveira (1)
Eliane Veiga da Costa (1)
Edson Elias da Silva (1)
1. Enterovirus Laboratory, Oswaldo Cruz Institute, Avenida Brasil 4365, Manguinhos, Rio de Janeiro, RJ, CEP 21040-360, Brazil - 刊物主题：Virology; Food Science; Chemistry/Food Science, general;
- 出版者：Springer US
- ISSN：1867-0342
文摘
Wild polioviruses still remain endemic in three countries (Afghanistan, Pakistan, and Nigeria) and re-emergency of wild polio has been reported in previously polio-free countries. Environmental surveillance has been used as a supplementary tool in monitoring the circulation of wild poliovirus (PVs) and/or vaccine-derived PVs even in the absence of acute flaccid paralysis cases. This study aimed to monitor the presence of polioviruses in wastewater samples collected at one wastewater treatment plant located in the municipality of Rio de Janeiro, Brazil. From December 2011 to June 2012 and from September to December 2012, 31 samples were collected and processed. RD and L20B cell cultures were able to isolate PVs and non-polio enteroviruses in 27/31 samples. Polioviruses were isolated in eight samples (type 1 Sabin = 1, type 2 Sabin = 5, and type 3 Sabin = 2). Vaccine-derived polioviruses were not detected nor evidence of recombination with other PVs or non-polio enterovirus serotypes were observed among the isolates. The Sabin-related serotypes 2 and 3 presented nucleotide substitutions in positions associated with the neurovirulent phenotype at the 5′-UTR. Changes in important Amino acid residues at VP1 were also observed in the serotypes 2 and 3. Environmental surveillance has been used successfully in monitoring the circulation of PVs and non-polio enteroviruses and it is of crucial importance in the final stages of the WHO global polio eradication initiative. Our results show the continuous circulation of Sabin-like PVs and non-polio enteroviruses in the analyzed area during the study period. Keywords Poliovirus Poliomyelitis Environmental surveillance Polio eradication