Phylogenetic and recombination analysis of rice black-streaked dwarf virus segment 9 in China

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• 作者：Yu Zhou (1)
  Jian-Feng Weng (1)
  Yan-Ping Chen (2)
  Chang-Lin Liu (1)
  Xiao-Hua Han (3)
  Zhuan-Fang Hao (1)
  Ming-Shun Li (1)
  Hong-Jun Yong (1)
  De-Gui Zhang (1)
  Shi-Huang Zhang (1)
  Xin-Hai Li (1)
  
  1. Institute of Crop Science ; Chinese Academy of Agricultural Sciences ; Zhongguancun South Street ; Haidian District ; Beijing ; 100081 ; China
  2. Institute of Food Crops ; Jiangsu Academy of Agricultural Sciences ; Nanjing ; 210014 ; Jiangsu ; China
  3. Institute of Food Crops ; Henan Academy of Agricultural Sciences ; Zhengzhou ; 450002 ; Henan ; China
  
• 刊名：Archives of Virology
• 出版年：2015
• 出版时间：April 2015
• 年：2015
• 卷：160
• 期：4
• 页码：1119-1123
• 全文大小：604 KB
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• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Biomedicine
  Virology
  Medical Microbiology
  Infectious Diseases
  
• 出版者：Springer Wien
• ISSN：1432-8798

文摘

Rice black-streaked dwarf virus (RBSDV) is an economically important virus that causes maize rough dwarf disease and rice black-streaked dwarf disease in East Asia. To study RBSDV variation and recombination, we examined the segment 9 (S9) sequences of 49 RBSDV isolates from maize and rice in China. Three S9 recombinants were detected in Baoding, Jinan, and Jining, China. Phylogenetic analysis showed that Chinese RBSDV isolates could be classified into two groups based on their S9 sequences, regardless of host or geographical origin. Further analysis suggested that S9 has undergone negative and purifying selection.