Defects on semiflexible filaments: Kinks and twist kinks
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  • 作者:Nam-Kyung Lee ; Albert Johner
  • 关键词:Biofilaments ; Random copolymers ; Polymer theory ; Worm ; like chain
  • 刊名:Journal of the Korean Physical Society
  • 出版年:2016
  • 出版时间:April 2016
  • 年:2016
  • 卷:68
  • 期:7
  • 页码:923-928
  • 全文大小:752 KB
  • 参考文献:[1]J. Howard, Mechanics of motor proteins and the cytoskeleton (Sinauer, Sunderland, MA, 2001).
    [2]M. Doi and S. F. Edwards, The theory of polymer dynamics (Clarendon Press, Oxford, 1986).
    [3]M. Rubinstein and R. Colby, Polymer Physics (Oxford University Press, New York, 2003).
    [4]A. Yu. Grosberg and A. R. Khokhlov, Statistical Physics of Macromolecules (AIP, New York, 1994).
    [5]G. Nam, M. L. Hisette, Y. L. Sun, T. Gisler, A. Johner, F. Thalmann, A. P. Schröder, C. M. Marques and N-K. Lee, Phys. Rev. Lett. 105, 088101 (2010).ADS CrossRef
    [6]B. O. Leung and K. C. Chou, Appl. Spectros. 65, 967 (2011).ADS CrossRef
    [7]I. M. Kuli, H. Mohrbach, V. Lobaskin, R. Thaokar and H. Schiessel, Phys. Rev. E 72, 041905 (2005).ADS CrossRef
    [8]N-K. Lee, J-S. Park, A. Johner, S. Obukhov, J-Y. Hyon, K-J. Lee and S-C. Hong, Phys. Rev. Lett. 101, 248101 (2008).ADS CrossRef
    [9]N-K. Lee, J-S. Park, A. Johner, S. Obukhov, J-Y. Hyon, K-J. Lee and S-C. Hong, Phys. Rev. E 79, 041921 (2009).ADS CrossRef
    [10]G-M. Nam, N-K. Lee, H. Mohrbach, A. Johner and I. M. Kulić, EPL 100, 28001 (2012).ADS CrossRef
    [11]H. Mohrbach, A. Johner and I. Kulić, Phys. Rev. Lett. 105, 268102 (2010).ADS CrossRef
    [12]B. Nöding and S. Köster, Phys. Rev. Lett. 108, 088101 (2012).ADS CrossRef
    [13]We may factorize out the WLC exponential part and exponentiate the 1 +... factors (upstairs and downstairs) as e log(1+...). The expansion then keeps only the Boltzmann weights to lowest order and the second order in qΔ. The latter expansion is most demanding.
    [14]In the following, we consider the regime where twistkinks remain scarce and their interaction is negligible. This supposes that their average separation ae E is markedly larger than their individual width λ = φ −1√l t/l p [10].
    [15]A. Y. Grosberg, Biofizika 29, 569 (1984).
    [16]G. Doetsch, Introduction to the theory and application of the Laplace transformation (Springer Verlag Berlin, Heidelberg, New York, Paris, Wien, 1974).CrossRef MATH
    [17]T. Sanchez, I. M. Kulić and Z. Dogic, Phys. Rev. Lett. 104 098103 (2010).ADS CrossRef
    [18]D. Riveline Thesis, Paris 6 (1997) (French).
    [19]J. Fierling, H. Mohrbach, I. K. Kulić, N-K. Lee and A. Johner, EPL 106, 58006 (2014).ADS CrossRef
    [20]A-Y. Kwon, N-K. Lee, S-C. Hong, J. Fierling and A. Johner, Biophys. J. 108, 2562 (2015).ADS CrossRef
  • 作者单位:Nam-Kyung Lee (1) (2)
    Albert Johner (1) (2)

    1. Institute of Fundamental Physics, Department of Physics, Sejong University, Seoul, 05006, Korea
    2. Institut Charles Sadron, Université de Strasbourg, CNRS UPR22, 23 rue du Loess 67034, 67034, Strasbourg cedex 2, France
  • 刊物主题:Physics, general; Theoretical, Mathematical and Computational Physics; Particle and Nuclear Physics;
  • 出版者:Springer Netherlands
  • ISSN:1976-8524
文摘
Due to local interactions with ligands or to global constraints, semiflexible filaments can exhibit localized defects. We focus on filaments laying flat on a surface. The two lowest order singularities are addressed: discontinuities of the orientation, which are called kink, and discontinuities of the curvature. The latter are called twist kinks in flattened helical filaments where they can form spontaneously. We calculate the partition functions for a given defect fugacity and discuss some often measured quantities like the correlation of the orientation along the filament.

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