Comparative Metabolite Profiling and Hormone Analysis of Perennial and Annual Rice
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  • 作者:Xiuqin Zhao (1)
    Ting Zhang (1) (2)
    Liyu Huang (1)
    Huimin Wu (1)
    Fengyi Hu (3)
    Fan Zhang (1)
    Linghua Zhu (1)
    Binying Fu (1)
  • 关键词:Rice ; Metabolite profiling ; Phytohormone ; Rhizome
  • 刊名:Journal of Plant Biology
  • 出版年:2012
  • 出版时间:February 2012
  • 年:2012
  • 卷:55
  • 期:1
  • 页码:73-80
  • 全文大小:522KB
  • 参考文献:1. Albinsky D, Kusano M, Higuchi M, Hayashi N, Kobayashi M, Fukushima A, Mori M, Ichikawa T, Matsui K, Kuroda H, Horii Y, Tsumoto Y, Sakakibara H, Hirochika H, Matsui M, Saito K (2010) Metabolomic screening applied to rice / FOX Arabidopsis lines leads to the identification of a gene-changing nitrogen metabolism. Mol Plant 3:125-42 CrossRef
    2. Assuero SG, Tognetti JA (2010) Tillering regulation by endogenous and environmental factors and its agricultural management. Am J Plant Sci Biot 4:35-8
    3. Bennett J, Ladha JK, Schmit V, Sheehy J (1998) New Frontier Projects: beyond the pipeline. In: Dowling NG, Greenfield SM, Fischer KS (eds) Sustainability of rice in the global food system. Pacific Basin Study Center and International Rice Research Institute, Los Banos, pp 225-43
    4. Bollmark M, Kubat B, Eliasson L (1988) Variations in endogenous cytokinin content during adventitious root formation in pea cuttings. J Plant Physiol 132:262-65
    5. Chatfiled SP, Stirnberg P, Forde BG, Leyser O (2000) The hormonal regulation of axillary bud growth in / Arabidopsis. Plant J 24:159-69 CrossRef
    6. Cox TS, Bender M, Picone C, Van Tassel DL, Holland JB, Brummer EC, Zoeller BE, Paterson AH, Jackson W (2002) Breeding perennial grain crops. Plant Sci 21:59-1
    7. Fiehn O (2002) Metabolomics—the link between genotypes and phenotypes. Plant Mol Biol 48:155-71 CrossRef
    8. Ghesquiere A (1991) Reexamination of genetic control of the reproductive barrier between / Oryza longistaminata and / O. sativa, and relationship to rhizome expression. In: Khush GS (ed) Rice genetics II. International Rice Research Institute, Los Banos, pp 729-30
    9. Harrison MA, Kaufman PB (1983) Estimates of free and bound indole-3-acetic acid and zeatin levels in relation to regulation of apical dominance and tiller release in oat stems. J Plant Growth Regul 2:215-23 CrossRef
    10. He Z (1993) Enzyme linked immunosorbent assay for endogenous plant hormones. In: He ZP (ed) Guidance to experiment on chemical control in crop plants. Beijing Agricultural University, Beijing, pp 60-8
    11. Horn HS, Rubenstein DL (1984) Behavioral adaptations and life history. In: Krebs JR, Davies NB (eds) Behavioral ecology: an evolutionary approach, 2nd edn. Sinauer, Sunderland, pp 279-98
    12. Hu FY, Tao DY, Sacks E, Fu BY, Xu P, Li J, Yang Y, McNally K, Khush GS, Paterson AH, Li ZK (2003) Convergent evolution of perenniality in rice and sorghum. Proc Natl Acad Sci U S A 100:4050-054 CrossRef
    13. Hu FY, Wang D, Zhao XQ, Zhang T, Sun HX, Zhu LH, Zhang F, Li LJ, Li QO, Tao DY, Fu BY, Li ZK (2011) Identification of rhizome-specific genes by genome-wide differential expression analysis in / Oryza longistaminata. BMC Plant Biol 11:18 CrossRef
    14. Jang CS, Kamps TL, Skinner DN, Schulze SR, Vencill WK, Paterson AH (2006) Functional classification, genomic organization, putatively cis-acting regulatory elements, and relationship to quantitative trait loci, of sorghum genes with rhizome-enriched expression. Plant Physiol 142:1148-159 CrossRef
    15. Kelman WM (1995) Inheritance of condensed tannin concentration and rhizome number in / Lotus pedunculatus Cav. SABRAO J Breed Genet 27:23-9
    16. Kim JK, Bamba T, Harada K, Fukusaki E, Kobayashi A (2007) Time-course metabolic profiling in / Arabidopsis thaliana cell cultures after salt stress treatment. J Exp Bot 58:415-24 CrossRef
    17. Lim H, Cho MH, Jeon JS, Bhoo SH, Kwon YK, Hahn TR (2009) Altered expression of pyrophosphate: fructose-6-phosphate 1-phosphotransferase affects the growth of transgenic / Arabidopsis plants. Mol Cells 27:641-49 CrossRef
    18. Maekawa M, Inukai T, Rikiishi K, Matsuura T, Noda K (1998) Inheritance of the rhizomatous trait in hybrids of / Oryza longistaminata Chev.Et.Roehr. and / sativa L. SABRAO J Breed Genet 30:69-2
    19. McSteen P (2009) Hormonal regulation of branching in grasses. Plant Physiol 149:46-5 CrossRef
    20. Roessner U, Wagner C, Kopka J, Trethewey RN, Willmitzer L (2000) Technical advance: simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry. Plant J 23:131-42 CrossRef
    21. Sacks EJ, Roxas JP, Cruz CM (2003a) Developing perennial upland rice I: Field performance of / Oryza sativa/ / O. rufipogon F1, F4, and BC1F4 Progeny. Crop Sci 43:120-28 CrossRef
    22. Sacks EJ, Roxas JP, Cruz CM (2003b) Developing perennial upland rice II: filed performance of S1 families from an intermated / Oryza sativa/ / O. longistaminata population. Crop Sci 43:129-34 CrossRef
    23. Schauer N, Semel Y, Roessner U, Gur A, Balbo I, Carrari F, Pleban T, Perez-Melis A, Bruedigam C, Kopka J, Willmitzer L, Zamir D, Fernie AR (2006) Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement. Nat Biotechnol 24:447-54 CrossRef
    24. Wagoner P (1990) Perennial grain development: past efforts and potential for the future. Plant Sci 9:381-08
    25. Westerbergh A, Doebley J (2004) Quantitative trait loci controlling phenotypes related to the perennial versus annual habit in wild relatives of maize. Theor Appl Genet 109:1544-553 CrossRef
    26. Wickson M, Thimann KV (1958) The antagonism of auxin and kinetin in apical dominance. Plant Physiol 49:304-14
    27. Wubben MJE, Rodermel SR, Baum TJ (2004) Mutation of a UDP-glucose-4-epimerase alters nematode susceptibility and ethylene responses in / Arabidopsis roots. Plant J 40:712-24 CrossRef
    28. Yim KO, Bayer DE (1997) Rhizome expression in a selected cross in the / Sorghum genus. Euphytica 94:253-56 CrossRef
    29. Yoshida S, Forno DA, Cock JH, Gomez KA (1976) Laboratory manual for physiological studies of rice, 3rd edn. International Rice Research Institute, Los Banos, pp 61-4
    30. Zhang YX, Wu RH, Qin GJ, Chen ZL, Gu HY, Qu LJ (2011a) Over-expression of / WOX1 leads to defects in meristem development and polyamine homeostasis in / Arabidopsis. Integr Plant Biol 53:493-06 CrossRef
    31. Zhang T, Li LJ, Hu FY, Zhao XQ, Fu BY, Yang DC (2011b) Analysis of ESTs from a normalized cDNA library of the rhizome tip of / Oryza longistaminata. J Plant Biol. doi:10.1007/s12374-011-9187-2
  • 作者单位:Xiuqin Zhao (1)
    Ting Zhang (1) (2)
    Liyu Huang (1)
    Huimin Wu (1)
    Fengyi Hu (3)
    Fan Zhang (1)
    Linghua Zhu (1)
    Binying Fu (1)

    1. Institute of Crop Sciences/National Key Facility for Crop Gene Resources and Genetic Improvement, Chinese Academy of Agricultural Sciences, 12 South Zhong-Guan-Cun St, Beijing, 100081, China
    2. College of Life Sciences, Wuhan University, Wuhan, 430072, China
    3. Food Crops Research Institute, Yunnan Academy of Agricultural Sciences, Kunming, 650205, China
文摘
Perenniality is one of the important topics in rice breeding which is generally accompanied by complex physiobiochemical processes. To understand the metabolic characteristics of perennial rice, in the present study, gas chromatography–mass spectrometry and enzyme-linked immunosorbent assays were used to profile the distribution patterns of 33 primary metabolites and hormones [indole-3-acetic acid (IAA) and zeatin riboside (ZR)] of annual (RD23) and perennial (Oryza longistaminata and the line AA with RD23 genetic background) rice genotypes. Results showed that both metabolites and hormones have distinct genotype and organ distribution patterns, and considerable variations were observed between the metabolites in stem bases of perennial and annual rice. Most of the metabolites, including sugars, organic acids, and amino acids, significantly accumulated in the stem bases of perennial rice by decreasing the level in roots and leaves. Fifteen metabolites consistently accumulated significantly in the stem bases of both perennial genotypes. Additionally, the organ-level IAA content and IAA/ZR ratio in the two perennials were considerably higher than those in RD23. The present study indicated that the significant accumulation of the metabolites at stem base and the higher IAA/ZR ratio are involved in the regulatory metabolism for rhizome development.

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