Expression analysis of key auxin synthesis, transport, and metabolism genes in different young dwarfing apple trees
详细信息    查看全文
  • 作者:Chunhui Song ; Dong Zhang ; Jie Zhang ; Liwei Zheng…
  • 关键词:Apple rootstock ; Auxin metabolism ; Transport ; Dwarfing ; Indole ; 3 ; acetic acid
  • 刊名:Acta Physiologiae Plantarum
  • 出版年:2016
  • 出版时间:February 2016
  • 年:2016
  • 卷:38
  • 期:2
  • 全文大小:1,559 KB
  • 参考文献:Alvarez R, Nissen SJ, Sutter EG (1989) Relationship between indole-3-acetic acid levels in apple (Malus pumila Mill) rootstocks cultured in vitro and adventitious root formation in the presence of indole-3-butyric acid. Plant Physiol 89:439–443PubMedCentral CrossRef PubMed
    Atkinson C, Else M, Taylor L, Dover C (2003) Root and stem hydraulic conductivity as determinants of growth potential in grafted trees of apple (Malus pumila Mill.). J Exp Bot 54:1221–1229CrossRef PubMed
    Blakeslee JJ, Peer WA, Murphy AS (2005) Auxin transport. Curr Opin Plant Biol 8:494–500CrossRef PubMed
    Chandler JW (2009) Auxin as compère in plant hormone crosstalk. Planta 231:1–12CrossRef PubMed
    Chen Q, Dai X, De-Paoli H, Cheng Y, Takebayashi Y, Kasahara H, Kamiya Y, Zhao Y (2014) Auxin overproduction in shoots cannot rescue auxin deficiencies in Arabidopsis roots. Plant Cell Physiol 55:1072–1079PubMedCentral CrossRef PubMed
    Cornille A, Giraud T, Smulders MJ, Roldán-Ruiz I, Gladieux P (2014) The domestication and evolutionary ecology of apples. Trends Genet 30:57–65CrossRef PubMed
    Dal Bosco C, Dovzhenko A, Liu X, Woerner N, Rensch T, Eismann M, Eimer S, Hegermann J, Paponov IA, Ruperti B, Heberle-Bors E, Touraev A, Cohen JD, Palme K (2012) The endoplasmic reticulum localized PIN8 is a pollen-specific auxin carrier involved in intracellular auxin homeostasis. Plant J 71:860–870CrossRef PubMed
    Dal Cin V, Velasco R, Ramina A (2009) Dominance induction of fruitlet shedding in Malus × domestica (L Borkh): molecular changes associated with polar auxin transport. BMC Plant Biol 9:139PubMedCentral CrossRef PubMed
    Ding X, Cao Y, Huang L, Zhao J, Xu C, Li X, Wang S (2008) Activation of the indole-3-acetic acid-amido synthetase GH3-8 suppresses expansin expression and promotes salicylate- and jasmonate-independent basal immunity in rice. Plant Cell 20:228–240PubMedCentral CrossRef PubMed
    Ding Z, Wang B, Moreno I, Duplakova N, Simon S, Carraro N, Reemmer J, Pencik A, Chen X, Tejos R, Skupa P, Pollmann S, Mravec J, Petrasek J, Zazimalova E, Honys D, Rolcik J, Murphy A, Orellana A, Geisler M, Friml J (2012) ER-localized auxin transporter PIN8 regulates auxin homeostasis and male gametophyte development in Arabidopsis. Nat Commun 3:941CrossRef PubMed
    Dobrev PI, Kamínek M (2002) Fast and efficient separation of cytokinins from auxin and abscisic acid and their purification using mixed-mode solid-phase extraction. J Chromatogr A 950:21–29CrossRef PubMed
    Dobrev PI, Havlíček L, Vágner M, Malbeck J, Kamínek M (2005) Purification and determination of plant hormones auxin and abscisic acid using solid phase extraction and two-dimensional high performance liquid chromatography. J Chromatogr A 1075:159–166CrossRef PubMed
    Mount DW  (2007) Using the Basic Local Alignment Search Tool (BLAST). CSH Protoc 2007
    Finn RD, Bateman A, Clements J, Coggill P, Eberhardt RY, Eddy SR, Heger A, Hetherington K, Holm L, Mistry J, Sonnhammer EL, Tate J, Punta M (2014) Pfam: the protein families database. Nucleic Acids Res 42:D222–D2230PubMedCentral CrossRef PubMed
    Gur A, Samish R (1968) The role of auxins and auxin destruction in the vigor effect induced by various apple rootstocks. Beitrage Biol Pfl 45:91–111 (bibl. 47)
    Hedden P (2003) The genes of the Green Revolution. Trends Genet 19:5–9CrossRef PubMed
    Jung S, Ficklin SP, Lee T, Cheng CH, Blenda A, Zheng P, Yu J, Bombarely A, Cho I, Ru S, Evans K, Peace C, Abbott AG, Mueller LA, Olmstead MA, Main D (2014) The Genome Database for Rosaceae (GDR): year 10 update. Nucleic Acids Res 42:D1237–D1244PubMedCentral CrossRef PubMed
    Kamboj JS, Quinlan JD (1998) The apple rootstock and its influence on endogenous hormones. Acta Hortic 463:143–152CrossRef
    Krecek P, Skupa P, Libus J, Naramoto S, Tejos R, Friml J, Zazimalova E (2009) The PIN-FORMED (PIN) protein family of auxin transporters. Genome Biol 10
    Lauri PE, Maguylo K, Trottier C (2006) Architecture and size relations: an essay on the apple (Malus × domestica, Rosaceae) tree. Am J Bot 93:357–368CrossRef PubMed
    Leclere S, Tellez R, Rampey RA, Matsuda SPT, Bartel B (2002) Characterization of a family of IAA-amino acid conjugate hydrolases from Arabidopsis. J Biol Chem 277:20446–20452CrossRef PubMed
    Letunic I, Doerks T, Bork P (2012) SMART 7: recent updates to the protein domain annotation resource. Nucleic Acids Res 40:D302–D305PubMedCentral CrossRef PubMed
    Li LC, Qin GJ, Tsuge T, Hou XH, Ding MY, Aoyama T, Oka A, Chen Z, Gu H, Zhao Y, Qu LJ (2008) SPOROCYTELESS modulates YUCCA expression to regulate the development of lateral organs in Arabidopsis. New Phytol 179:751–764CrossRef PubMed
    Lochard R, Schneider G (1981) Stock and scion growth relationships and the dwarfing mechanism in apple. Hortic Rev 3:315–375
    Mano Y, Nemoto K (2012) The pathway of auxin biosynthesis in plants. J Exp Bot 63:2853–2872CrossRef PubMed
    Mashiguchi K, Tanaka K, Sakai T, Sugawara S, Kawaide H, Natsume M, Hanada A, Yaeno T, Shirasu K, Yao H, McSteen P, Zhao YD, Hayashi K, Kamiya Y, Kasahara H (2011) The main auxin biosynthesis pathway in Arabidopsis. Proc Natl Acad Sci USA 108:18512–18517PubMedCentral CrossRef PubMed
    Michalczuk L (2002) Indole-3-acetic acid level in wood, bark and cambial sap of apple rootstocks differing in growth vigour. Acta Physiol Plant 24:131–136CrossRef
    Mravec J, Skupa P, Bailly A, Hoyerova K, Krecek P, Bielach A, Petrasek J, Zhang J, Gaykova V, Stierhof YD, Dobrev PI, Schwarzerova K, Rolcik J, Seifertova D, Luschnig C, Benkova E, Zazimalova E, Geisler M, Friml J (2009) Subcellular homeostasis of phytohormone auxin is mediated by the ER-localized PIN5 transporter. Nature 459:1136–1140CrossRef PubMed
    Ostrowski M, Jakubowska A (2008) Identification of enzyme activity that conjugates indole-3-acetic acid to aspartate in immature seeds of pea (Pisum sativum). J Plant Physiol 165(5):564–569CrossRef PubMed
    Ostrowski M, Jakubowska A (2011) Purification and biochemical characterization of indole-3-acetyl-aspartic acid synthetase from immature seeds of pea (Pisum sativum). J Plant Growth Regul 30(1):30–40CrossRef
    Rampey RA, LeClere S, Kowalczyk M, Ljung K, Sandberg G, Bartel B (2004) A family of auxin-conjugate hydrolases that contributes to free indole-3-acetic acid levels during Arabidopsis germination. Plant Physiol 135:978–988PubMedCentral CrossRef PubMed
    Robinson T, Aldwinckle H, Fazio G, Holleran T (2002) The Geneva series of apple rootstocks from Cornell: performance, disease resistance, and commercialization, In: XXVI international horticultural congress: genetics and breeding of tree fruits and nuts, vol 622, pp 513–520
    Saeed AI, Sharov V, White J, Li J, Liang W, Bhagabati N, Braisted J, Klapa M, Currier T, Thiagarajan M, Sturn A, Snuffin M, Rezantsev A, Popov D, Ryltsov A, Kostukovich E, Borisovsky I, Liu Z, Vinsavich A, Trush V, Quackenbush J (2003) TM4: a free, open-source system for microarray data management and analysis. Biotechniques 34:374–378PubMed
    Seleznyova AN, Thorp TG, White M, Tustin S, Costes E (2003) Application of architectural analysis and AMAPmod methodology to study dwarfing phenomenon: the branch structure of ‘Royal Gala’ apple grafted on dwarfing and non-dwarfing rootstock/interstock combinations. Ann Bot 91:665–672PubMedCentral CrossRef PubMed
    Seleznyova AN, Tustin DS, Thorp TG (2008) Apple dwarfing rootstocks and interstocks affect the type of growth units produced during the annual growth cycle: precocious transition to flowering affects the composition and vigour of annual shoots. Ann Bot 101:679–687PubMedCentral CrossRef PubMed
    Shehata SAM, El-Shraiy AM (2010) Regulating cucumber grafting by interactions of cytokinins in xylem exudates of rootstock and basipetal polar auxin transport of scion at graft union. Aust J Basic Appl Sci 4:6179–6184
    Singh Kamboj J, Quinlan JD (1997) The apple rootstock and its influence on endogenous hormones. In: VIII international symposium on plant bioregulation in fruit production, vol 463, pp 143–152
    Soejima J, Yoshida Y, Haniuda T, Bessho H, Tsuchiya S, Masuda T, Komori S, Sanada T, Ito Y, Sadamori S (2010) New dwarfing apple rootstocks ‘JM1’, ‘JM7’ and ‘JM8’. Bull Natl Inst Fruit Tree Sci 11:1–16
    Soumelidou K, Battey N, John P, Barnett J (1994a) The anatomy of the developing bud union and its relationship to dwarfing in apple. Ann Bot 74:605–611CrossRef
    Soumelidou K, Morris D, Battey N, Barnett J, John P (1994b) Auxin transport capacity in relation to the dwarfing effect of apple rootstocks. J Hortic Sci 69:719–725
    Spiess GM, Hausman A, Yu P, Cohen JD, Rampey RA, Zolman BK (2014) Auxin input pathway disruptions are mitigated by changes in auxin biosynthetic gene expression in Arabidopsis. Plant Physiol 165:1092–1104PubMedCentral CrossRef PubMed
    Staswick PE, Serban B, Rowe M, Tiryaki I, Maldonado MT, Maldonado MC, Suza W (2005) Characterization of an Arabidopsis enzyme family that conjugates amino acids to indole-3-acetic acid. Plant Cell 17(2):616–627PubMedCentral CrossRef PubMed
    Van Hooijdonk B, Woolley D, Warrington I, Tustin D (2010) Initial alteration of scion architecture by dwarfing apple rootstocks may involve shoot–root–shoot signalling by auxin, gibberellin, and cytokinin. J Hortic Sci Biotechnol 85:59–65
    Van Hooijdonk B, Woolley D, Warrington I, Tustin D (2011) Rootstocks modify scion architecture, endogenous hormones, and root growth of newly grafted ‘Royal Gala’ apple trees. J Am Soc Hortic Sci 136:93–102
    Won C, Shen X, Mashiguchi K, Zheng Z, Dai X, Cheng Y, Kasahara H, Kamiya Y, Chory J, Zhao Y (2011) Conversion of tryptophan to indole-3-acetic acid by TRYPTOPHAN AMINOTRANSFERASES OF ARABIDOPSIS and YUCCAs in Arabidopsis. Proc Natl Acad Sci USA 108:18518–18523PubMedCentral CrossRef PubMed
    Yildirim AN, Polat M, Dolgun O, Askin MA, Gokbayrak Z, San B (2010) Graft formation in some spur and vigorous apple varieties grafted on Ottawa 3 rootstock: a histological investigation. J Food Agric Environ 8:512–514
    Yin H, Yan B, Sun J, Jia P, Zhang Z, Yan X, Chai J, Ren Z, Zheng G, Liu H (2012) Graft-union development: a delicate process that involves cell–cell communication between scion and stock for local auxin accumulation. J Exp Bot 63:4219–4232PubMedCentral CrossRef PubMed
    Zagaja S (1980) Performance of two apple cultivars on P series dwarf rootstocks. In: Symposium on research and development on orchard and plantation systems, vol 114, pp 162–169
    Zhang SW, Li CH, Cao J, Zhang YC, Zhang SQ, Xia YF, Sun DY, Sun Y (2009) Altered architecture and enhanced drought tolerance in rice via the down-regulation of indole-3-acetic acid by TLD1/OsGH3.13 activation. Plant Physiol 151:1889–1901PubMedCentral CrossRef PubMed
    Zhao YD (2008) The role of local biosynthesis of auxin and cytokinin in plant development. Curr Opin Plant Biol 11:16–22CrossRef PubMed
    Zhao Y (2010) Auxin biosynthesis and its role in plant development. Annu Rev Plant Biol 61:49–64PubMedCentral CrossRef PubMed
    Zhao Y, Christensen SK, Fankhauser C, Cashman JR, Cohen JD, Weigel D, Chory J (2001) A role for flavin monooxygenase-like enzymes in auxin biosynthesis. Science 291:306–309CrossRef PubMed
  • 作者单位:Chunhui Song (1)
    Dong Zhang (1)
    Jie Zhang (1)
    Liwei Zheng (1)
    Caiping Zhao (1)
    Juanjuan Ma (1)
    Na An (1)
    Mingyu Han (1)

    1. College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
  • 刊物主题:Plant Physiology; Plant Genetics & Genomics; Plant Biochemistry; Plant Pathology; Plant Anatomy/Development; Agriculture;
  • 出版者:Springer Berlin Heidelberg
  • ISSN:1861-1664
文摘
The control of scion vigor by dwarfing apple rootstocks is most convincingly elucidated by the shoot–root–shoot signaling of auxins and other hormones. To identify auxin and auxin-related genes that may play roles in the composite tree’s auxin metabolism and dwarfing mechanism, the concentrations of IAA and the expression level of key auxin synthesis, transport, and metabolism genes were measured in leaves, phloem, and roots from the dwarfing Fuji/M9 and the vigorous Fuji/MM106. The results showed that the indole-3-acetic acid (IAA) content was lower in the dwarfing Fuji/M9 than in the vigorous Fuji/MM106. The IAA content in the Fuji/M9 rootstock’s phloem was higher than that of its scion phloem. The expression level of MdYUCCA10a gene was significantly lower in the leaves and roots of Fuji/M9 than in that of the Fuji/MM106. The phloem and roots of the Fuji/M9 rootstock showed low expression levels of MdPIN1b and MdPIN8a. The auxin-conjugated genes MdGH3-5b and MdGH3-9a showed lower expression levels in the Fuji/M9 than in the Fuji/MM106. However, the Fuji/M9 showed higher levels of the auxin-conjugate hydrolase genes MdIAR3c and MdILL6c. The low expression level of auxin synthesis gene MdYUCCA10a in Fuji/M9 probably induced the low auxin level. The lower expression levels of auxin transport genes MdPIN1b and MdPIN8a in the M9 rootstock were suggested to probably contribute to auxin accumulation in Fuji/M9 rootstock phloem. The low amount of auxin transported from the shoots along with the root auxin synthesis deficiencies reduced the root growth and then decreased the supply of root-produced substances to the shoots in Fuji/M9.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700