Sydowia japonica, a new name for Leptosphaerulina japonica based on morphological and molecular data

详细信息    查看全文

• 作者：Yuuri Hirooka (1)
  Hayato Masuya (1)
  Mitsuteru Akiba (1)
  Takanori Kubono (1)
  
• 关键词：Cryptomeria japonica ; Dothideaceae ; Dothideales ; Dothioraceae ; Loculoascomycetes ; Japanese cedar
• 刊名：Mycological Progress
• 出版年：2013
• 出版时间：May 2013
• 年：2013
• 卷：12
• 期：2
• 页码：173-183
• 全文大小：1261KB
• 参考文献：1. Barr ME (1972) Preliminary studies on the / Dothideales in temperate North America. Contr Univ Mich Herbarium 9:523鈥?38
  2. Barr ME (2001) Revisionary studies on the / Dothioraceae. Harv Pap Bot 6:25鈥?4
  3. Bills GF, Collado J, Ruibal C, Pel谩ez F, Platas G (2004) / Hormonema carpetanum sp. nov., a new lineage of dothideaceous black yeasts from Spain. Stud Mycol 50:149鈥?57
  4. Brefeld O, Tavel RF von (1891) Untersuchungen aus dem Gesammtgebiete der Mykologie 10: 269
  5. Butin H, Pehl L (1993) / Kabatina abietis sp. nov., associated with browning of fir needles. Mycol Res 97:1340鈥?342 CrossRef
  6. Butin H, Schneider R (1976) / Kabatina populi nov. spec. Phytopathol Z 85:39鈥?2 CrossRef
  7. Cheewangkoon R, Groenewald JZ, Summerell BA, Hyde KD (2009) / Myrtaceae, a cache of fungal biodiversity. Persoonia 23:55鈥?5 CrossRef
  8. Crous PW, Gams W, Stalpers JA, Robert V, Stegehuis G (2004) Mycobank: an online initiative to launch mycology into the 21st century. Stud Mycol 50:19鈥?2
  9. de Hoog GS, Hermanides-Nijhof EJ (1977) Survey of black yeasts and allied fungi. Stud Mycol 15:178鈥?21
  10. Denison WC, Carlstrom RC (1968) Ascocarp development in / Leptosphaerulina argentinensis. J Mitchell Soc XX:254鈥?57
  11. Dugan FM (2006) The identification of Fungi: An illustrated introduction with keys, glossary and guide to literature. APS Press, St Paul, Minnesota
  12. Eriksson O (1981) The families of bitunicate ascomycetes. Oper Bot 60:1鈥?20
  13. Farr DF, Rossman AY (2012) Fungal databases, systematic mycology and microbiology laboratory, ARS, USDA. http://nt.ars-grin.gov/fungaldatabases/. Accessed 9 Feb 2012
  14. Graham JH, Luttrell ES (1961) Species of / Leptosphaerulina on forage plants. Phytopathol 51:680鈥?93
  15. Grove WB (1912) New or noteworthy fungi 鈥?part IV. J Bot L 50:44鈥?5
  16. Gruyter J de, Aveskamp MM, Woudenberg JHC, Verkley GJM, Groenewald JZ, Crous PW (2009) Molecular phylogeny of / Phoma and allied anamorph genera: towards a reclassification of the / Phoma complex. Mycol Res 113:508鈥?09 CrossRef
  17. Hawksworth DL (2011) A new dawn for the naming of fungi: impacts of decisions made in Melbourne in July 2011 on the future publication and regulation of fungal names. Mycokeys 1:7鈥?0 CrossRef
  18. Hermanides-Nijhof EJ (1977) / Aureobasidium and allied genera. Stud Mycol 15:141鈥?77
  19. Huelsenbeck JP, Ronquist F, Nielsen ES, Bollback JP (2001) Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294:2310鈥?314 CrossRef
  20. Huelsenbeck JP, Larget B, Miller RE, Ronquist F (2002) Potential applications and pitfalls of Bayesian inference of phylogeny. Syst Biol 51:673鈥?88 CrossRef
  21. Hyde KD, McKenzie EHC, KoKO TW (2011) Towards incorporating anamorphic fungi in a natural classification 鈥?checklist and notes for 2010. Mycosphere 2:1鈥?8
  22. Inderbitzin P, Gareth Jones EB, Vrijmoed LP (2000) A new species of / Leptosphaerulina from decaying mangrove wood from Hong Kong. Mycoscience 41:233鈥?37 CrossRef
  23. Ito K, Shibukawa K, Kobayashi T (1952) Etiological and pathological studies on the needle blight of / Cryptomeria japonica 1. Morphology and pathogenicity of the fungi inhabiting the blighted needles. Bull Gov For Exp Sta (Tokyo) 52:79鈥?52 (In Japanese)
  24. Kasai M (1917) Sclerotia disease on seedlings of Japanese cedar and black spot disease on Japanese cedar. J Plant Prot 4:23鈥?8, Japanese title were translated in English by authors
  25. Katoh T (2008) Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinform 9:286鈥?98 CrossRef
  26. Kobayashi T (1970) Notes on new or little-known fungi inhabiting woody plants in Japan II. Trans Mycol Soc Jpn 11:57鈥?3
  27. Kornerup A, Wanscher JH (1978) Methuen handbook of colour, 3rd edn. Methuen, London
  28. Luttrell ES (1951) Taxonomy of the Pyrenomycetes. Univ Mo Stud 24:1鈥?20
  29. Luttrell ES (1960) The morphology of an undescribed species of / Dothiora. Mycologia 52:64鈥?9 CrossRef
  30. Maddison WP, Maddison DR (2010) Mesquite: a modular system for evolutionary analysis. version 2.74. http://mesquiteproject.org
  31. Mason-Gamer RJ, Kellogg EA (1996) Testing for phylogenetic conflict among molecular data sets in the tribe / Triticeae ( / Gramineae). Syst Biol 45:524鈥?45 CrossRef
  32. McNeill J, Turland NJ, Monro A, Lepschi BJ (2011) XVIII International Botanical Congress: preliminary mail vote and report of Congress action on nomenclature proposals. Taxon 60:1507鈥?520
  33. M眉ller E (1953) 脺ber / Dothidea polyspora Berf. et v.Tav. und die Gattung Sydowia Bres. Sydowia 7:340鈥?42
  34. Nirenberg HI (1976) Untersuchungen 眉ber die morphologische und biologische Differenzierung in der Fusarium-Sektion Liseola. / Mitteilungen aus der Biologischen Bundesanstalt f眉r Land- und Forstwirtschaft 169:I鈥搗 + 1鈥?17
  35. Norvell LL (2011) Fungal nomenclature. 1. Melbourne approves a new Code. Mycotaxon 116:481鈥?90 CrossRef
  36. Posada D (2008) jModelTest:Phylogenetic model averaging. http://darwin.uvigo.es/
  37. Reeb V, Lutzoni F, Roux C (2004) Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on lichen-forming Acarosporaceae and evolution of polyspory. Mol Phyl Evol 32:1036鈥?060 CrossRef
  38. Roux C (1986) / Leptosphaerulina chartarum sp. nov., the teleomorph of / Pothomyces chartarum. Trans Br Mycol Soc 86:319鈥?23 CrossRef
  39. Saccardo PA (1889) Sylloge Fungorum hucusque congnitorum vol. VII. Padova
  40. Sawada K (1950) Fungi inhabiting on conifers in the Tohoku district. 1. Fungi on 鈥淪ugi鈥? / Cryptomeria japonica D. Don.). Bull Gov For Exp Sta (Tokyo) 45:27鈥?3, In Japanese with Latin diagnoses
  41. Schneider R, Von Arx JA (1966) Zwei neue, als Erreger von Zweigsterben nachgewiesene Pilze: / Kabatina thujae n. g., n. sp. und / K. / juniper n. sp. Phytopathol Z 57:176鈥?82 CrossRef
  42. Schoch CL, Crous PW, Groenewald JZS, Boehm EWA, Burgess TI et al (2009) A class-wide phylogenetic assessment of Dothideomycetes. Stud Mycol 64:1鈥?5 CrossRef
  43. Shear CL, Davidson RW (1940) A new species of / Dothiora on aspen and willow. Mycologia 32:105鈥?11 CrossRef
  44. Sivanesan A (1984) The bitunicate / Ascomycetes and their anamorphs. Vaduz Lichtenstein
  45. Stamatakis A, Hoover P, Rougemont J (2008) A rapid bootstrap algorithm for the RAxML web-servers. Syst Biol 75:758鈥?71 CrossRef
  46. Sutton BC (1980) The Coelomycetes, fungi imperfecti with acervuli, pycnidia and stromata. Commonwealth Mycological Institute, Kew, Richmond
  47. Sutton BC, Waterston JM (1970) / Sydowia polyspora. C.M.I. Descr Pathog Fungi Bact 228:1鈥?, No. 228
  48. Swofford DL (2002) PAUP*. Phylogenetic analysis using parsimony(*and other methods), ver 4.10. Sinauer Associates, Sunderland
  49. Talg酶 V, Chastagner G, Thomsen IM, Cech T, Riley K, Lange K, Klemsdal SS, Stensvand A (2010) / Sydowia polyspora associated with current season needle necrosis (CSNN) on true fir ( / Abies spp.). Fungal Biol 114:545鈥?54 CrossRef
  50. Tsuneda A, Hambleton S, Currah RS (2004) Morphology and phylogenetic placement of / Endoconidioma, a new endoconidial genus from trembling aspen. Mycologia 96:1128鈥?135 CrossRef
  51. Tsuneda A, Davey ML, Currah RS (2011) A new endoconidial black meristematic genus, / Atramixtia, associated with declining white spruce and phylogenetically allied to a lineage of dothidealean conifer pathogens. Botany 89:323鈥?36 CrossRef
  52. Wehmeyer LE (1955) The development of the ascocarp in / Pseudoplea gaeumannii. Mycologia 47:163鈥?76 CrossRef
  53. White T, Bruns JTD, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA sequences for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR Protocols: a guide to methods and applications. Academic Press, San Diego, pp 315鈥?22
  54. Wu M, Hanlin RT (1992) Ascomal development in / Leptosphaerulina crassiasca. Mycologia 84:241鈥?52 CrossRef
  55. Zhang Y, Crous PW, Schoch CL, Hyde KD (2012) Pleosporales. Fungal Divers 53:1鈥?21 CrossRef
  
• 作者单位：Yuuri Hirooka (1)
  Hayato Masuya (1)
  Mitsuteru Akiba (1)
  Takanori Kubono (1)
  
  1. Department of Forest Microbiology, Forestry and Forest Products Research Institute, Matsunosato 1, Tsukuba, Ibaraki, 305-8687, Japan
  

文摘

We examined the taxonomic position of Leptosphaerulina japonica, a parasitic fungus on male strobili of Japanese cedar (Cryptomeria japonica) using morphology and molecular phylogeny. Because neither specimens nor illustrations were designated in the original paper, this name is neotypified with a fresh specimen collected from the type locality, Yamagata, Japan. Leptosphaerulina japonica has asci produced in a broad layer arising from the entire base of the locule, stipitate acervuli, and a hormonema-like synanamorph. These characteristics are not typical of the genus Leptosphaerulina (Didymellaceae, Pleosporales). In a molecular phylogenetic analysis of ITS sequences, L. japonica was placed into the Dothideaceae/Dothioraceae, Dothideales. Although muriform ascospores and an anamorph with long stipitate acervuli have not been reported for species in Sydowia, the other morphology and phylogeny support placement of L. japonica in that genus. Thus, a new combination, Sydowia japonica, is proposed.