Plant hormone signaling and modulation of DNA repair under stressful conditions

详细信息    查看全文

• 作者：Mattia Donà (1)
  Anca Macovei (1) (2)
  Matteo Faè (1)
  Daniela Carbonera (1)
  Alma Balestrazzi (1)
  
• 关键词：Abscisic acid ; Defense response ; DNA repair ; Gibberellic acid ; Homologous recombination ; Salicylic acid
• 刊名：Plant Cell Reports
• 出版年：2013
• 出版时间：July 2013
• 年：2013
• 卷：32
• 期：7
• 页码：1043-1052
• 全文大小：286KB
• 参考文献：1. Achary VMM, Panda BB (2010) Aluminium-induced DNA damage and adaptive response to genotoxic stress in plant cells are mediated through reactive oxygen intermediates. Mutagenesis 25:201-09 CrossRef
  2. Achary VMM, Parinandi NL, Panda BB (2013) Calcium channel blockers protect against aluminium-induced DNA damage and block adaptive response to genotoxic stress in plant cells. Mutat Res Genet Toxicol Environ Mutagen 751:130-38 CrossRef
  3. Ahmad A, Zhang Y, Cao X-F (2010) Decoding the epigenetic language of plant development. Mol Plant 3:719-28 CrossRef
  4. Al-Rumaih MM (2007) The radio-protective role of gibberellic acid on nucleic acid metabolism in three species of senna. J Food Agric Environ 5:359-62
  5. Balestrazzi A, Locato V, Bottone MG, De Gara L, Biggiogera M, Pellicciari C, Botti S, Di Gesù D, Donà M, Carbonera D (2010) Response to UV-C radiation in topo I-deficient carrot cells with low ascorbate levels. J Exp Bot 61:575-85 CrossRef
  6. Balestrazzi A, Confalonieri M, Macovei A, Carbonera D (2011) Genotoxic stress and DNA repair in plants: emerging functions and tools for improving crop productivity. Plant Cell Rep 30:287-95 CrossRef
  7. Balestrazzi A, Confalonieri M, Macovei A, Carbonera D (2012) Genotoxic stress, DNA repair, and crop productivity. In: Tuteja N, Gill SS (eds) Crop improvement under adverse conditions. Springer-Verlag, Berlin (in press)
  8. Bissenbaev AK, Ishchenko AA, Taipakova SM, Saparbaev MK (2011) Presence of base excision repair enzymes in the wheat aleurone and their activation in cells undergoing programmed cell death. Plant Physiol Biochem 49:1155-164 CrossRef
  9. Boyko A, Kovalchuck I (2011) Genetic and epigenetic effects of plant–pathogen interactions: an evolutionary perspective. Mol Plant 4:1014-023 CrossRef
  10. Boyko A, Kathiria P, Zemp FJ, Yao Y, Pogribny I et al (2007) Transgenerational changes in the genome stability and methylation in pathogen-infected plants (virus-induced plant genome instability). Nucleic Acids Res 35:1714-725 CrossRef
  11. Bundock P, van Attikum H, Hoykaas P (2002) Increased telomere length and hypersensitivity to DNA damaging agents in an / Arabidopsis KU70 mutant. Nucleic Acids Res 30:3395-400 CrossRef
  12. Dominguez F, Moreno J, Cejudo FJ (2004) A gibberellin-induced nuclease is localised in the nucleus of wheat aleurone cells undergoing programmed cell death. J Biol Chem 279:11530-1536 CrossRef
  13. Dong L, Wen J, Pier E, Zhang X, Zhang B, Dong F, Ziegler N, Mysz M, Armenta R, Cui R (2013) Melanocyte-stimulating hormone directly enhances UV-induced DNA repair in keratinocytes by a Xeroderma Pigmentosum group A-dependent mechanisms. Cancer Res 70:3547-556 CrossRef
  14. Downs JA, Jackson SP (2004) A means to a DNA end: the many roles of Ku. Nat Rev Mol Cell Biol 5:367-78 CrossRef
  15. Durrant WE, Dong X (2004) Systemic acquired resistance. Annu Rev Phytopathol 42:185-09 CrossRef
  16. Durrant WE, Wang S, Dong X (2007) / Arabidopsis / SNI1 and / RAD51D regulated both gene transcription and DNA recombination during the defense response. Proc Natl Acad Sci USA 104:4223-227 CrossRef
  17. Eulgem T (2005) Regulation of the / Arabidopsis defense transcriptome. Trends Plant Sci 10:71-8 CrossRef
  18. Farmer EE, Ryan CA (1990) Interplant communication: airborne methyl jasmonate induces synthesis of proteinase inhibitors in plant leaves. Proc Natl Acad Sci USA 87:7713-716 CrossRef
  19. Fath A, Bethke PC, Jones RL (2001) Enzymes that scavenge reactive oxygen species are down-regulated prior to gibberellic acid-induced programmed cell death in barley aleurone. Plant Physiol 126:156-66 CrossRef
  20. Filkenstein RR, Gampala SS, Rock CD (2002) Abscisic acid signaling in seeds and seedlings. Plant Cell 14(Suppl):S15–S45
  21. Filkowski J, Kovalchuk O, Kovalchuk I (2004) Genome stability of / vtc1, / tt4, and / tt5 Arabidopsis thaliana mutants impaired in protection against oxidative stress. Plant J 38:60-9 CrossRef
  22. Fujita M, Fujita Y, Noutoshi Y, Takahashi F, Marusaka Y et al (2006) Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks. Curr Opin Plant Biol 9:436-42 CrossRef
  23. Gallego ME, Jalut N, White CI (2003) Telomerase dependence of telomere lengthening in / Ku80 mutant / Arabidopsis. Plant Cell 15:782-89 CrossRef
  24. Gichner T, Menke M, Strareva DA, Schubert I (2000) Maleic hydrazide induces genotoxic effects but no DNA damage detectable by the comet assay to tobacco and field beans. Mutagenesis 15:385-89 CrossRef
  25. Gill SS, Tuteja N (2010) Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants. Plant Physiol Biochem 48:909-30 CrossRef
  26. Haffner MC, De Marzo AM, Meeker AK, Nelson WG, Yegnasubramanian S (2011) Transcription-induced DNA double strand breaks: both oncogenic force and potential therapeutic target? Clin Cancer Res 17:3858-864 CrossRef
  27. Halazonetis TD, Gorgoulis VG, Bartek J (2008) An oncogene-induced DNA damage model for cancer development. Science 319:1352-355 CrossRef
  28. Han P, Li Q, Zhu YX (2008) Mutation of / Arabidopsis BARD1 causes meristem defects by failing to confine WUSCHEL expression to the organizing center. Plant Cell 20:1482-493 CrossRef
  29. Heil M, Silva Bruno JC (2007) Within-plant signaling by volatiles leads to induction and priming of an indirect plant defense in nature. Proc Natl Acad Sci USA 104:5467-472 CrossRef
  30. Howe GA, Jander G (2008) Plant immunity to insect herbivores. Annu Rev Plant Biol 59:41-6 CrossRef
  31. Hu Y (2009) BRCA1, hormone, and tissue-specific tumor suppression. Int J Biol Sci 5:20-7 CrossRef
  32. Jenik PD, Jurkuta RE, Barton MK (2005) Interactions between the cell cycle and embryonic patterning in / Arabidopsis uncovered by a mutation in DNA polymerase epsilon. Plant Cell 17:3362-377 CrossRef
  33. Jensen RB, Carreira A, Kowalczykowski SC (2010) Purified human BRCA2 stimulates RAD51-mediated recombination. Nature 467:678-83 CrossRef
  34. Jones JD, Dangl JL (2006) The plant immune system. Nature 444:323-29 CrossRef
  35. Kathiria P, Sidees C, Golubov A, Kalischuk M, Kawchuk LM et al (2010) Tobacco mosaic virus infection results in an increase in recombination frequency and resistance to viral, bacterial, and fungal pathogens in the progeny of infected tobacco plants. Plant Physiol 153:1859-870 CrossRef
  36. Kesarwani M, Yoo J, Dong X (2007) Genetic interactions of TGA transcription factors in the regulation of pathogenesis-related genes and disease resistance in / Arabidopsis. Plant Physiol 144:336-46 CrossRef
  37. Kovalchuk I, Kovalchuk O, Kalck V, Boyko V, Filkowski J et al (2003) Pathogen-induced systemic plant signal triggers DNA rearrangements. Nature 423:760-62 CrossRef
  38. Larkindale J, Hall JD, Knight MR, Vierling E (2005) Heat stress phenotypes of / Arabidopsis mutants implicate multiple signaling pathways in the acquisition of thermotolerance. Plant Physiol 138:882-97 CrossRef
  39. Li H, Luan S (2011) The cyclophilin AtCYP71 interacts with CAF-1 and LHP1 and functions in multiple chromatin remodeling processes. Mol Plant 4:748-58 CrossRef
  40. Li X, Zhang Y, Clarke JD, Li Y, Dong X (1999) Identification and cloning of a negative regulator of systemic acquired resistance, SNI1, trough a screen for suppressors of / npr1- / 1. Cell 98:329-39 CrossRef
  41. Li B, Carey M, Workman JL (2007) The role of chromatin during transcription. Cell 128:707-19 CrossRef
  42. Liu PF, Chang WC, Wang YK, Munisamy SB, Hsu SH et al (2008a) Differential regulation of / Ku gene expression in etiolated mungbean hypocotyls by auxins. Biochem Biophys Acta 1769:443-54
  43. Liu PF, Wang YK, Chang WC, Chang HY, Pan RL (2008b) Regulation of / Arabidopsis thaliana / Ku genes at different developmental stages under heat stress. Biochim Biophys Acta 1779:402-07 CrossRef
  44. Liu ZQ, Gao J, Dong AW, Shen WH (2009) A truncated / Arabidopsis NUCLEOSOME ASSEMBLY PROTEIN 1, AtNAP1;3T, alters plant growth responses to abscisic acid and salt in the Atnap1;3-2 mutant. Mol Plant 2:688-99
  45. Lumba S, Cutler S, McCourt P (2010) Plant nuclear hormone receptors: a role for small molecules in protein–protein interactions. Annu Rev Cell Dev Biol 26:445-69 CrossRef
  46. Machaiah JP, Vakie UK, Sreenivasan A (1976) The effects of gamma irradiation on biosynthesis of gibberellins in germinating wheat. Environ J Exp Bot 16:131-40 CrossRef
  47. Macovei A, Balestrazzi A, Confalonieri M, Carbonera D (2010) The / Tdp1 (Tyrosyl-DNA phosphodiesterase) gene family in barrel medic ( / Medicago truncatula Gaertn.): bioinformatic investigation and expression profiles in response to copper- and PEG-mediated stress. Planta 232:393-07 CrossRef
  48. Macovei A, Balestrazzi A, Confalonieri M, Buttafava A, Carbonera D (2011) The / TFIIS and / TFIIS-like genes from / Medicago truncatula are involved in oxidative stress response. Gene 470:20-0 CrossRef
  49. March-Diaz R, Garcia-Dominguez M, Lozano-Juste J, Leon J, Florencio FJ et al (2008) Histone H2A.Z and homologues of components of the SWR1 complex are required to control immunity in / Arabidopsis. Plant J 53:475-87 CrossRef
  50. Merkel P, Khoury N, Bertolotto C, Perfetti C (2003) Insulin and glucose regulate the expression of the DNA repair enzyme XPD. Mol Cell Endocrinol 201:75-5 CrossRef
  51. Mostoslavsky R (2008) DNA repair, insulin signaling and sirtuins: at the crossroad between cancer and aging. Front Biosci 13:6966-990 CrossRef
  52. Murfett J, Wang XJ, Hagen G, Guilfoyle TJ (2001) Identification of / Arabidopsis histone deacetylase HDA6 mutants that affect transgene expression. Plant Cell 13:1047-061
  53. Ogas J, Kaufmann S, Henderson J, Somerville C (1999) PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in / Arabidopsis. Proc Natl Acad Sci USA 23:13839-3844 CrossRef
  54. Panda BB, Panda KK (2002) Genotoxicity and mutagenicity of heavy metals in plants. In: Prasad MNV, Strzalka K (eds) Physiology and biochemistry of metal tolerance in plants. Kluwer, Amsterdam, pp 395-14
  55. Patra J, Sahoo MK, Panda BB (2005) Salicylic acid triggers genotoxic adaptation to methyl mercuric chloride and ethyl methane sulfonate, but not to maleic hydrazide in root meristem cells of / Allium cepa L. Mutat Res 581:173-80 CrossRef
  56. Perruc E, Knoshita NI, Lopez-Molina L (2007) The role of chromatin-remodeling factor PKL in balancing osmotic stress responses during / Arabidopsis seed germination. Plant J 52:927-36 CrossRef
  57. Pieterse CMJ, Van der Does D, Zamioudis C, Leon-Reyes A, Van Wees SCM (2012) Hormonal modulation of plant immunity. Annu Rev Cell Develop Biol 28:489-21 CrossRef
  58. Pospiech H, Syvaoja JE (2003) DNA polymerase ε-more than a polymerase. Sci World J 3:87-04 CrossRef
  59. Puizina J, Siroky J, Mokros P, Schweizer D, Riha K (2004) Mre11 deficiency in / Arabidopsis is associated with chromosomal instability in somatic cells and Spo11-dependent genome fragmentation during meiosis. Plant Cell 16:1968-978 CrossRef
  60. Riha K, Shippen DE (2003) Ku is required for telomeric C-rich strand maintenance but not for end-to-end chromosome fusions in / Arabidopsis. Proc Natl Acad Sci USA 100:611-15 CrossRef
  61. Riha K, Watson JM, Parkey J, Shippen DE (2002) Telomere length deregulation and enhanced sensitivity to genotoxic stress in / Arabidopsis mutants deficient in Ku70. EMBO J 21:2819-826 CrossRef
  62. Ritchie S, Swanson SJ, Gilroy S (2000) Physiology of the aleurone layer and starchy endosperm during grain development and early seedling growth: new insights from cellular and molecular biology. Seed Sci Res 10:193-12
  63. Roth N, Klimesch J, Dukowic-Schulze S, Pacher M, Mannuss A et al (2012) The requirement for recombination factors differs considerably between different pathways of homologous double-strand break repair in somatic plant cells. Plant J 72:781-90 CrossRef
  64. Saez A, Rodrigues A, Santiago J, Rubio S, Rodriguez PL (2008) HAB1-SW13B interaction reveals a link between abscisic acid signaling and putative SWI/SNF chromatin-remodeling complexes in / Arabidopsis. The Plant Cell 20:2972-988
  65. Santner A, Estelle M (2009) Recent advances and emerging trends in plant hormone signaling. Nature 459:1071-078 CrossRef
  66. Schwartz SH, Leon-Kloosterziel KM, Korneef M, Zeevaart JA (1997) Biochemical characterization of the / aba2 and / aba3 mutants in / Arabidopsis thaliana. Plant Physiol 114:161-66 CrossRef
  67. Shen W-H, Xu L (2009) Chromatin remodeling in stem cell maintenance in / Arabidopsis thaliana. Mol Plant 2:600-09 CrossRef
  68. Shinozaki K, Yamaguchi-Shinozaki K (2007) Gene networks involved in drought stress response and tolerance. J Exp Bot 58:221-27 CrossRef
  69. Singh DP, Moore CA, Gilliland A, Carr JP (2004) Activation of multiple antiviral defence mechanisms by salicylic acid. Mol Plant Pathol 5:57-3 CrossRef
  70. Spoel SH, Mou Z, Tada Y, Spivev NW, Genschik P, Dong X (2009) Proteasome-mediated turnover of the transcription coactivator NPR1 plays dual roles in regulating plant immunity. Cell 137:860-72 CrossRef
  71. Sridha S, Wu K (2006) Identification of / Arabidopsis thaliana HD2C as a novel regulator of abscisic acid response in / Arabidopsis. The Plant J 46:124-33 CrossRef
  72. Stivers JT, Jiang YL (2003) A mechanistic perspective on the chemistry of DNA repair glycosylases. Chem Rev 103:2729-759 CrossRef
  73. Tamura K, Adachi Y, Chiba K, Oguchi K, Takahashi H (2002) Identification of Ku70 and Ku80 homologues in / Arabidopsis thaliana: evidence for a role in repair of double strand breaks. Plant J 29:771-81 CrossRef
  74. Torres MA, Dangl JL, Jones JD (2002) Arabidopsis gp91phox homologues AtrbohD and AtrbohF are required for accumulation of reactive oxygen intermediates in the plant defense response. Proc Natl Acad Sci USA 99:517-22 CrossRef
  75. Trapp O, Seeliger K, Puchta H (2011) Homolog of breast cancer genes in plants. Front Plant Sci 2:19 CrossRef
  76. Trewavas A (2003) Aspects of plant intelligence. Ann Bot 92:1-0 CrossRef
  77. Turner JG, Ellis C, Devoto A (2002) The jasmonate signal pathway. Plant Cell 14:S153–S164
  78. Tuteja N, Ahmad P, Panda BB, Tuteja R (2009) Genotoxic stress in plants: shedding light on DNA damage repair and DNA repair helicases. Mutat Res 681:134-49 CrossRef
  79. Vlot AC, Dempsey DA, Klessig DF (2009) Salicylic acid, a multifaceted hormone to combat disease. Annu Rev Phytopathol 47:177-08 CrossRef
  80. Wang S, Durrant WE, Song J, Spivey NW, Dong X (2010) / Arabidopsis BRCA2 and RAD51 proteins are specifically involved in defense transcription during plant immune responses. Proc Natl Acad Sci USA 107:22716-2721 CrossRef
  81. Weber W, Daoud-El Baba M, Fussenegger M (2007) Synthetic ecosystems based on airborne inter and intra-kingdom communication. Proc Natl Acad Sci USA 104:10435-0440 CrossRef
  82. Yao Y, Danna CH, Zemp FJ, Titov V, Ciftci ON et al (2011) UV-C-irradiated / Arabidopsis and tobacco emit volatiles that trigger genomic instability in neighboring plants. Plant Cell 23:3842-852 CrossRef
  83. Yin H, Zhang X, Liu Y, Wang Y, He J et al (2009) Epigenetic regulation, somatic homologous recombination, and abscisic acid signaling are influenced by DNA polymerase ε mutation in / Arabidopsis. Plant Cell 21:388-02
  84. Zharkov DO (2008) Base excision DNA repair. Cell Mol Life Sci 65:1544-565 CrossRef
  85. Zhu J, Jeong JC, Zhu Y, Sokolchik I, Miyazaki S, Zhu J-K, Hasegawa PM, Bohnert HJ, Shi H, Yun D-J, Bressan RA (2008) Involvement of / Arabidopsis HOS15 in histone deacetylation and cold tolerance. Proc Natl Acad Sci USA 105:4945-950 CrossRef
  
• 作者单位：Mattia Donà (1)
  Anca Macovei (1) (2)
  Matteo Faè (1)
  Daniela Carbonera (1)
  Alma Balestrazzi (1)
  
  1. Department of Biology and Biotechnology ‘L. Spallanzani- University of Pavia, via Ferrata 1, 27100, Pavia, Italy
  2. International Center for Genetic Engineering and Biotechnology (ICGEB), Aruna Asaf Ali Marg, 110 067, New Delhi, India
  
• ISSN：1432-203X

文摘

The role played by phytohormone signaling in the modulation of DNA repair gene and the resulting effects on plant adaptation to genotoxic stress are poorly investigated. Information has been gathered using the Arabidopsis ABA (abscisic acid) overly sensitive mutant abo4-1, defective in the DNA polymerase ε function that is required for DNA repair and recombination. Similarly, phytohormone-mediated regulation of the Ku genes, encoding the Ku heterodimer protein involved in DNA repair, cell cycle control and telomere homeostasis has been demonstrated, highlighting a scenario in which hormones might affect genome stability by modulating the frequency of homologous recombination, favoring plant adaptation to genotoxic stress. Within this context, the characterisation of Arabidopsis AtKu mutants allowed disclosing novel connections between DNA repair and phytohormone networks. Another intriguing aspect deals with the emerging correlation between plant defense response and the mechanisms responsible for genome stability. There is increasing evidence that systemic acquired resistance (SAR) and homologous recombination share common elements represented by proteins involved in DNA repair and chromatin remodeling. This hypothesis is supported by the finding that volatile compounds, such as methyl salicylate (MeSA) and methyl jasmonate (MeJA), participating in the plant-to-plant communication can trigger genome instability in response to genotoxic stress agents. Phytohormone-mediated control of genome stability involves also chromatin remodeling, thus expanding the range of molecular targets. The present review describes the most significant advances in this specific research field, in the attempt to provide a better comprehension of how plant hormones modulate DNA repair proteins as a function of stress.