Mixed-strain housing for female C57BL/6, DBA/2, and BALB/c mice: validating a split-plot design that promotes refinement and reduction
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  • 作者:Michael Walker ; Carole Fureix ; Rupert Palme…
  • 关键词:Mice ; Refinement ; Reduction ; Animal Welfare ; Experimental Design ; Split ; Plot
  • 刊名:BMC Medical Research Methodology
  • 出版年:2016
  • 出版时间:December 2016
  • 年:2016
  • 卷:16
  • 期:1
  • 全文大小:675 KB
  • 参考文献:1.Russell WMS, Burch RLJA. The Principles of Humane Experimental Technique. London, UK; Methuen Publishing Ltd (C1959); 1959.
    2.EU Directive 2010/63/EU of the European Parliament and of the Council of 22 September 2010 on the Protection of Animals Used for Scientific Purposes. http://​eur-lex.​europa.​eu/​legal-content/​EN/​TXT/​HTML/​?​uri=​CELEX:​32010L0063&​from=​EN
    3.National Research Council of the National Academies. Guide for the Care and Use of Laboratory Animals. 8th Ed. 2011. http://​grants.​nih.​gov/​grants/​olaw/​Guide-for-the-Care-and-Use-of-Laboratory-Animals.​pdf
    4.Hurst JL, West RS. Taming anxiety in laboratory mice. Nat Methods. 2010;7(10):825–U1516.CrossRef PubMed
    5.Marx U, Walles H, Hoffmann S, Lindner G, Horland R, Sonntag F, et al. ‘Human-on-a-chip’ developments: A translational cutting-edge alternative to systemic safety assessment and efficiency evaluation of substances in laboratory animals and man? Altern Lab Anim. 2012;40(5):235–57.PubMed
    6.Kilkenny C, Parsons N, Kadyszewski E, Festing MFW, Cuthill IC, Fry D, et al. Survey of the quality of experimental design, statistical analysis and reporting of research using animals. Plos One. 2009;4(11):11.CrossRef
    7.Altman N, Krzywinski M. Points of significance: Split plot design. Nat Methods. 2015;12(3):165–6.CrossRef PubMed
    8.Festing M. 3Rs- Reduction; Factorial Experiments. http://​www.​3rs-reduction.​co.​uk/​html/​10_​_​factorial_​experiments.​html . Accessed May 19, 2015.
    9.Lehner PN. Handbook of Ethological Methods. 2nd ed. New York: Cambridge University Press; 1996.
    10.Wurbel H. Behaviour and the standardization fallacy. Nat Genet. 2000;26(3):263.CrossRef PubMed
    11.Nevison CM, Hurst JL, Barnard CJ. Strain-specific effects of cage enrichment in male laboratory mice (Mus musculus). Anim Welf. 1999;8(4):361–79.
    12.Singer P, Feldon J, Yee BK. Are DBA/2 mice associated with schizophrenia-like endophenotypes? A behavioural contrast with C57BL/6 mice. Psychopharmacology. 2009;206(4):677–98.CrossRef PubMed
    13.Harizi H, Homo-Delarche F, Amirani A, Coulaud J, Mormede P. Marked genetic differences in the regulation of blood glucose under immune and restraint stress in mice reveals a wide range of corticosensitivity. J Neuroimmunol. 2007;189(1–2):59–68.CrossRef PubMed
    14.Richter SH, Garner JP, Zipser B, Lewejohann L, Sachser N, Touma C, et al. Effect of population heterogenization on the reproducibility of mouse behavior: A multi-laboratory study. Plos One. 2011;6(1):14.CrossRef
    15.Tucci V, Lad HV, Parker A, Polley S, Brown SDM, Nolan PM. Gene-environment interactions differentially affect mouse strain behavioral parameters. Mamm Genome. 2006;17(11):1113–20.CrossRef PubMed
    16.Bowley S. A Hitchhiker's Guide to Statistics in Plant Biology. 2nd Ed. Guelph, Ont.: Any Old Subject Books; 2008.
    17.Festing MFW. 3Rs- Reduction; Statistical Analysis. http://​www.​3rs-reduction.​co.​uk/​html/​12_​_​statisticanalysi​s.​html . Accessed May 19, 2015.
    18.Walker M, Fureix C, Palme R, Mason G. Co-housing rodents with different coat colours as a simple, non-invasive means of individual identification: Validating mixed-strain housing for C57BL/6 and DBA/2 mice. Plos One. 2013;8(10):e77541.CrossRef PubMedCentral PubMed
    19.Dahlborn K, Bugnon P, Nevalainen T, Raspa M, Verbost P, Spangenberg E. Report of the federation of european laboratory animal science associations working group on animal identification. Lab Anim. 2013;47(1):2–11.CrossRef PubMed
    20.Burn CC, Deacon RMJ, Mason GJ. Marked for life? Effects of early cage-cleaning frequency, delivery batch, and identification tail-marking on rat anxiety profiles. Dev Psychobiol. 2008;50(3):266–77.CrossRef PubMed
    21.The Jackson Laboratory. Growth curve analysis of 7 inbred strains of mice. MPD:Jaxpheno5. Mouse Phenome Database web site, The Jackson Laboratory, Bar Harbor, Maine USA. http://​phenome.​jax.​org ; 2006.
    22.Moy SS, Nadler JJ, Young NB, Perez A, Holloway LP, Barbaro RP, et al. Mouse behavioral tasks relevant to autism: Phenotypes of 10 inbred strains. Behav Brain Res. 2007;176(1):4–20.CrossRef PubMedCentral PubMed
    23.Olsson IAS, Westlund K. More than numbers matter: The effect of social factors on behaviour and welfare of laboratory rodents and non-human primates. Appl Anim Behav Sci. 2007;103(3–4):229–54.CrossRef
    24.Cannon CZ, Kissling GE, Goulding DR, King-Herbert AP, Blankenship-Paris T. Analgesic effects of tramadol, carprofen or multimodal analgesia in rats undergoing ventral laparotomy. Lab Animal. 2011;40(3):85–93.CrossRef
    25.Martin P, Bateson P. Measuring Behaviour: An Introductory Guide. 2nd Ed. Cambridge University Press; 1994:i-xvi, 1–222.
    26.Tilly SLC, Dallaire J, Mason GJ. Middle-aged mice with enrichment-resistant stereotypic behaviour show reduced motivation for enrichment. Anim Behav. 2010;80(3):363–73.CrossRef
    27.Mason GJ, Latham NR. Can’t stop, won’t stop: Is stereotypy a reliable animal welfare indicator? Anim Welf. 2004;13:S57–69.
    28.Ennaceur A, Michalikova S, Bradford A, Ahmed S. Detailed analysis of the behavior of Lister and Wistar rats in anxiety, object recognition and object location tasks. Behav Brain Res. 2005;159(2):247–66.CrossRef PubMed
    29.Walker MD, Mason G. Female C57BL/6 mice show consistent individual differences in spontaneous interaction with environmental enrichment that are predicted by neophobia. Behav Brain Res. 2011;224(1):207–12.CrossRef PubMed
    30.Adamec R, Head D, Blundell J, Burton P, Berton O. Lasting anxiogenic effects of feline predator stress in mice: Sex differences in vulnerability to stress and predicting severity of anxiogenic response from the stress experience. Physiol Behav. 2006;88(1–2):12–29.CrossRef PubMed
    31.Matthews K, Christmas D, Swan J, Sorrell E. Animal models of depression: Navigating through the clinical fog. Neurosci Biobehav Rev. 2005;29(4–5):503–13.CrossRef PubMed
    32.Porsolt RD, Bertin A, Jalfre M. Behavioral despair in mice – Primary screening tests for antidepressants. Arch Int Pharmacodyn Ther. 1977;229(2):327–36.PubMed
    33.Petit-Demouliere B, Chenu F, Bourin M. Forced swimming test in mice: A review of antidepressant activity. Psychopharmacology. 2005;177(3):245–55.CrossRef PubMed
    34.Arai I, Tsuyuki Y, Shiomoto H, Satoh M, Otomo S. Decreased body temperature dependent appearance of behavioral despair in the forced swimming test in mice. Pharmacol Res. 2000;42(2):171–6.CrossRef PubMed
    35.Touma C, Palme R, Sachser N. Analyzing corticosterone metabolites in fecal samples of mice: A noninvasive technique to monitor stress hormones. Horm Behav. 2004;45(1):10–22.CrossRef PubMed
    36.Touma C, Sachser N, Mostl E, Palme R. Effects of sex and time of day on metabolism and excretion of corticosterone in urine and feces of mice. Gen Comp Endocrinol. 2003;130(3):267–78.CrossRef PubMed
    37.Roitt IM, Brostoff J, Male DK. Immunology. 5th ed. London: C.V. Mosby; 1998.
    38.Kelley SP, Grota LJ, Felten SY, Madden KS, Felten DL. Norepinephrine in mouse spleen shows minor strain differences and no diurnal variation. Pharmacol Biochem Behav. 1996;53(1):141–6.CrossRef PubMed
    39.Lazic SE. The problem of pseudoreplication in neuroscientific studies: Is it affecting your analysis? BMC Neurosci. 2010;11:5.CrossRef PubMedCentral PubMed
    40.Hurlbert SH. Pseudoreplication and the design of ecological field experiments. Ecol Monogr. 1984;54(2):187–211.CrossRef
    41.Newman JA, Bergelson J, Grafen A. Blocking factors and hypothesis tests in ecology: Is your statistics text wrong? Ecology. 1997;78(5):1312–20.CrossRef
    42.Benjamini Y, Drai D, Elmer G, Kafkafi N, Golani I. Controlling the false discovery rate in behavior genetics research. Behav Brain Res. 2001;125(1–2):279–84.CrossRef PubMed
    43.Benjamini Y, Liu W. A step-down multiple hypotheses testing procedure that controls the false discovery rate under independence. J Stat Plan Inference. 1999;82(1–2):163–70.CrossRef
    44.SanchezMeca J, MarinMartinez F. Homogeneity tests in meta-analysis: A Monte Carlo comparison of statistical power and type I error. Qual Quant. 1997;31(4):385–99.CrossRef
    45.Mumby PJ. Statistical power of non-parametric tests: A quick guide for designing sampling strategies. Mar Pollut Bull. 2002;44(1):85–7.CrossRef PubMed
    46.R Core Team. A Language and Environment for Statistical Computing. R Foundation for Statistical Computing; 2014. www.​R-project.​org .
    47.Pinheiro J, Bates D, DebRoy S, Sarkar D, R Core Team. Linear and nonlinear mixed effects models; 2014. http://​CRAN.​R-project.​org/​package=​nlme
    48.Lakens D. Calculating and reporting effect sizes to facilitate cumulative science: a practical primer for t-tests and ANOVAs. Front Psychol. 2013;4:863.CrossRef PubMedCentral PubMed
    49.Hoenig JM, Heisey DM. The abuse of power: The pervasive fallacy of power calculations for data analysis. Am Stat. 2001;55(1):19–24.CrossRef
    50.Cohen J. Statistical power analysis for the behavioral sciences. 2nd ed. N.J. L. Hillsdale: Erlbaum Associates; 1988.
    51.Festing MFW. Extending the statistical analysis and graphical presentation of toxicity test results using standardized effect sizes. Toxicol Pathol. 2014;42(8):1238–49.CrossRef PubMed
    52.Ducottet C, Belzung C. Correlations between behaviours in the elevated plus-maze and sensitivity to unpredictable subchronic mild stress: evidence from inbred strains of mice. Behav Brain Res. 2005;156(1):153–62.CrossRef PubMed
    53.The Jackson Laboratory.: Hematological survey of 11 inbred strains of mice. MPD:22969. Mouse Phenome Database web site, The Jackson Laboratory, Bar Harbor, Maine USA. http://​phenome.​jax.​org ; 2007.
    54.Gross AN, Richter SH, Engel AKJ, Wurbel H. Cage-induced stereotypies, perseveration and the effects of environmental enrichment in laboratory mice. Behav Brain Res. 2012;234(1):61–8.CrossRef PubMed
    55.Grafen A, Hails R. Modern Statistics for the Life Sciences: Learn how to Analyse your Experiments. Oxford University Press 2002:i-xv, 1–351.
    56.Wolfer DP, Litvin O, Morf S, Nitsch RM, Lipp HP, Wurbel H. Cage enrichment and-mouse behaviour - Test responses by laboratory mice are unperturbed by more entertaining housing. Nature. 2004;432(7019):821–2.CrossRef PubMed
    57.Taylor K, Gordon N, Langley G, Higgins W. Estimates for worldwide laboratory animal use in 2005. Altern Lab Anim. 2008;36(3):327–42.PubMed
    58.Ioannidis JPA. Why most published research findings are false. Plos Medicine. 2005;2(8):696–701.CrossRef
    59.Curley JP, Rock V, Moynihan AM, Bateson P, Keverne EB, Champagne FA. Developmental shifts in the behavioral phenotypes of inbred mice: The role of postnatal and juvenile social experiences. Behav Genet. 2010;40(2):220–32.CrossRef PubMedCentral PubMed
    60.Vaahtovuo J, Toivanen P, Eerola E. Bacterial composition of murine fecal microflora is indigenous and genetically guided. FEMS Microbiol Ecol. 2003;44(1):131–6.CrossRef PubMed
  • 作者单位:Michael Walker (1)
    Carole Fureix (1)
    Rupert Palme (2)
    Jonathan A. Newman (3)
    Jamie Ahloy Dallaire (1)
    Georgia Mason (1)

    1. Animal Biosciences, University of Guelph, Guelph, ON, N1G 2 W1, Canada
    2. Department of Biomedical Sciences/Biochemistry, University of Veterinary Medicine, Veterinärplatz 1, Vienna, A-1210, Austria
    3. College of Biological Science, University of Guelph, Guelph, ON, N1G 2 W1, Canada
  • 刊物主题:Theory of Medicine/Bioethics; Statistical Theory and Methods; Statistics for Life Sciences, Medicine, Health Sciences;
  • 出版者:BioMed Central
  • ISSN:1471-2288
文摘
Background Inefficient experimental designs are common in animal-based biomedical research, wasting resources and potentially leading to unreplicable results. Here we illustrate the intrinsic statistical power of split-plot designs, wherein three or more sub-units (e.g. individual subjects) differing in a variable of interest (e.g. genotype) share an experimental unit (e.g. a cage or litter) to which a treatment is applied (e.g. a drug, diet, or cage manipulation). We also empirically validate one example of such a design, mixing different mouse strains -- C57BL/6, DBA/2, and BALB/c -- within cages varying in degree of enrichment. As well as boosting statistical power, no other manipulations are needed for individual identification if co-housed strains are differentially pigmented, so also sparing mice from stressful marking procedures.

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