Determination of exon 7 SMN1 deletion in Iranian patients and heterozygous carriers by quantitative real-time PCR
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  • 作者:MOHAMMAD TAGHI AKBARI (1) (2)
    MEHRDAD NORUZINIA (1)
    HOSSEIN MOZDARANI (1)
    MOHAMMAD HAMID (3)
  • 关键词:spinal muscular atrophy ; exon 7 deletion ; SMN1 gene ; real ; time PCR
  • 刊名:Journal of Genetics
  • 出版年:2011
  • 出版时间:April 2011
  • 年:2011
  • 卷:90
  • 期:1
  • 页码:133-136
  • 全文大小:616KB
  • 参考文献:1. Feldk枚tter M., Schwarzer V., Wirth R., Wienker T. and Wirth B. 2002 Quantitative analyses of SMN1 and SMN2 based on real-time lightCycler PCR: fast and highly reliable carrier testing and prediction of severity of spinal muscular atrophy. / Am. J. Hum. Genet. 70, 358鈥?68. CrossRef
    2. Gerard B., Ginet N., Matthijs G., Evrard P., Baumann C., Da Silva F. / et al. 2000 Genotype determination at the survival motor neuron locus in a normal population and SMA carriers using competitive PCR and primer extension. / Hum. Mutat. 16, 253鈥?63. CrossRef
    3. Lee T., Kim S., Lee K., Jin H., Koo S., Jo I. / et al. 2004 Quantitative analysis of SMN1 gene and estimation of SMN1 deletion carrier frequency in Korean population based on real-time PCR. / J. Korean Med. Sci. 19, 870鈥?73. CrossRef
    4. Lefebvre S., Burglen L., Reboullet S., Clermont O., Burlet P., Viollet L. / et al. 1995 Identification and characterization of a spinal muscular atrophy-determining gene. / Cell 80, 155鈥?65. CrossRef
    5. Martin Y., Valero A., del Castillo E., Pascual S. and Hernandez-Chico C. 2002 Genetic study of SMA patients without homozygous SMN1 deletions: identification of compound heterozygotes and characterisation of novel intragenic SMN1 mutations. / Hum. Genet. 110, 257鈥?63. CrossRef
    6. McAndrew P., Parsons D., Simard L., Rochette C., Ray P. and Mendell J. 1997 Identification of proximal spinal muscular atrophy carriers and patients by analysis of SMNT and SMNC gene copy number. / Am. J. Hum. Genet. 60, 1411鈥?422. CrossRef
    7. Miller S. A., Dykes D. D. and Polesky H. F. 1988 A simple salting out procedure for extracting DNA from human nucleated cells. / Nucleic Acids Res. 16, 1215. CrossRef
    8. Munsat T. and Davies K. 1992 Meeting report: International SMA consortium meeting. / Neuromuscul. Disord. 2, 423鈥?28. CrossRef
    9. Passon N., Pozzo F., Molinis C., Bregant E., Gellera C., Damante G. / et al. 2009 A simple multiplex real-time PCR methodology for the SMN1 gene copy number quantification. / Genet. Test. Mol. Biomarkers 13, 37鈥?2. CrossRef
    10. Pearn J. 1980 Classification of spinal muscular atrophies. / Lancet 1, 919鈥?22. CrossRef
    11. Ruiz-Ponte C., Carracedo A. and Barros F. 2006 Duplication and deletion analysis by fluorescent real-time PCR-based genotyping. / Clin. Chim. Acta 363, 138鈥?46. CrossRef
    12. Scheffer H., Cobben J., Mensink R., Stulp R., Van der Steege G. and Buys C. 2000 SMA carrier testing鈥搗alidation of hemizygous SMN exon 7 deletion test for the identification of proximal spinal muscular atrophy carriers and patients with a single allele deletion. / Eur. J. Hum. Genet. 8, 79鈥?6. CrossRef
    13. Scheffer H., Cobben J., Matthijs G. and Wirth B. 2001 Best practice guidelines for molecular analysis in spinal muscular atrophy. / Eur. J. Hum. Genet 9, 484鈥?91. CrossRef
    14. Shadrina M.聽I., Semenova E.聽V., Slominsky P.聽A., Bagyeva G.聽H., Illarioshkin S.聽N., Ivanova S. II. / et al. 2007 Effective quantitative real-time polymerase chain reaction analysis of the parkin gene (PARK2) exon 1鈥?2 dosage. / BMC Med. Genet. 8, 6. CrossRef
    15. Vaerman J., Saussoy P. and Ingargiola I. 2004 Evaluation of real-time PCR data. / J. Biol. Regul. Homeost. Agents 18, 212鈥?14.
    16. Wirth B., Hahnen E., Morgan K., DiDonato C.聽J., Dadze A. and Rudnik-Schoneborn S. 1995 Allelic association and deletions in autosomal recessive proximal spinal muscular atrophy: association of marker genotype with disease severity and candidate cDNAs. / Hum. Mol. Genet. 4, 1273鈥?284. CrossRef
    17. Wirth B., Herz M., Wetter A., Moskau S., Hahnen E. and Rudnik-Schoneborn S. 1999 Quantitative analysis of survival motor neuron copies: identification of subtle SMN1 mutations in patients with spinal muscular atrophy, genotype-phenotype correlation, and implications for genetic counseling. / Am. J. Hum. Genet. 64, 1340鈥?356. CrossRef
  • 作者单位:MOHAMMAD TAGHI AKBARI (1) (2)
    MEHRDAD NORUZINIA (1)
    HOSSEIN MOZDARANI (1)
    MOHAMMAD HAMID (3)

    1. Department of Medical Genetics, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, 14115鈥?11, Iran
    2. Tehran Medical Genetics Laboratory, No. 297, Taleghani Street, Tehran, 1598619617, Iran
    3. Molecular Medicine Division, Biotechnology Research Center, Pasteur Institute of Iran, No. 69, Pasteur Ave, 13164, Tehran, Iran
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