Reconstruction of the biosynthetic pathway for the core fungal polyketide scaffold rubrofusarin in Saccharomyces cerevisiae
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  • 作者:Peter Rugbjerg (1) (2)
    Michael Naesby (1)
    Uffe H Mortensen (2)
    Rasmus JN Frandsen (2)
  • 关键词:Iterative polyketide synthase ; Pigment ; Heterologous production ; YWA1 ; Nor ; rubrofusarin ; Aurofusarin
  • 刊名:Microbial Cell Factories
  • 出版年:2013
  • 出版时间:December 2013
  • 年:2013
  • 卷:12
  • 期:1
  • 全文大小:396 KB
  • 参考文献:1. Weissman KJ, Leadlay PF: Combinatorial biosynthesis of reduced polyketides. / Nat Rev Microbiol 2005, 3:925-36. CrossRef
    2. Tao K, Du L, Sun X, Cai M, Zhu T, Zhou X, Gu Q, Zhang Y: Biosynthesis of aspergiolide A, a novel antitumor compound by a marine-derived fungus Aspergillus glaucus via the polyketide pathway. / Tetrahedron Lett 2009, 50:1082-085. CrossRef
    3. Zhang YL, Ge HM, Zhao W, Dong H, Xu Q, Li SH, Li J, Zhang J, Song YC, Tan RX: Unprecedented Immunosuppressive Polyketides from Daldinia eschscholzii , a Mantis-Associated Fungus. / Angew Chem 2008, 120:5907-910. CrossRef
    4. Mapari SA, Meyer AS, Thrane U, Frisvad JC: Identification of potentially safe promising fungal cell factories for the production of polyketide natural food colorants using chemotaxonomic rationale. / Microb Cell Fact 2009, 8:24. CrossRef
    5. Wang T, Lin T: Monascus Rice Products. / Adv Food Nutr Res 2007, 53:123-59. CrossRef
    6. Kealey J, Liu L, Santi D, Betlach M, Barr P: Production of a polyketide natural product in nonpolyketide-producing prokaryotic and eukaryotic hosts. / Proc Natl Acad Sci USA 1998, 95:505-09. CrossRef
    7. Wattanachaisaereekul S, Lantz AE, Nielsen ML, Andre S: Optimization of Heterologous Production of the Polyketide 6-MSA in Saccharomyces cerevisiae . / Biotechnology 2007, 97:893-00.
    8. Wattanachaisaereekul S, Lantz AE, Nielsen ML, Nielsen J: Production of the polyketide 6-MSA in yeast engineered for increased malonyl-CoA supply. / Metab Eng 2008, 10:246-54. CrossRef
    9. Zhou H, Qiao K, Gao Z, Vederas JC, Tang Y: Insights into radicicol biosynthesis via heterologous synthesis of intermediates and analogs. / J Biol Chem 2010, 285:41412-1421. CrossRef
    10. Zhou H, Gao Z, Qiao K, Wang J, Vederas JC, Tang Y: A fungal ketoreductase domain that displays substrate-dependent stereospecificity. / Nat Chem Biol 2012, 8:331-33. CrossRef
    11. Ishiuchi K, Nakazawa T, Ookuma T, Sugimoto S, Sato M, Tsunematsu Y, Ishikawa N, Noguchi H, Hotta K, Moriya H, Watanabe K: Establishing a New Methodology for Genome Mining and Biosynthesis of Polyketides and Peptides through Yeast Molecular Genetics. / Chem Bio Chem 2012, 13:846-54. CrossRef
    12. Frandsen RJN, Nielsen NJ, Maolanon N, S?rensen JC, Olsson S, Nielsen J, Giese H: The biosynthetic pathway for aurofusarin in Fusarium graminearum reveals a close link between the naphthoquinones and naphthopyrones. / Mol Microbiol 2006, 61:1069-080. CrossRef
    13. Ghosal S, Biswas K, Chakrabati D: Toxic naphtho-gamma-pyrones from Aspergillus niger . / J Agric Food Chem 1979, 27:1347-351. CrossRef
    14. Shibata S, Ohta A, Ogihara Y: / The reactions of ustilaginoidin A. Bull: Chem. Pharm; 1963.
    15. Branco A, Pinto AC, Braz-Filho R, Silva EF, Grynberg NF, Echevarria A: Rubrofusarin, a natural polyketide as new human topoisomerase II-α inhibitor. / Revista Brasileira de Farmacognosia 2008, 18:703-08. CrossRef
    16. Graham JG, Zhang H, Pendland SL, Santarsiero BD, Mesecar AD, Cabieses F, Farnsworth NR: Antimycobacterial Naphthopyrones from Senna obliqua. / J Nat Prod 2004, 67:225-27. CrossRef
    17. Brown D, Hauser F, Tommasi R: Structural Elucidation of a Putative Conidial Pigment Intermediate in Aspergillus parasiticus . / Tetrahedron Lett 1993, 34:5-.
    18. Frandsen RJN, Schütt C, Lund BW, Staerk D, Nielsen J, Olsson S, Giese H: Two novel classes of enzymes are required for the biosynthesis of aurofusarin in Fusarium graminearum . / J Biol Chem 2011, 286:10419-0428. CrossRef
    19. Watanabe A, Sankawa U, Mayorga E, Timberlake WE, Ebizuka Y: Re-identification of Aspergillus nidulans wA Gene to Code for a Polyketide Synthase of Naphthopyrone. / Tetrahedron Lett 1999, 40:91-4. CrossRef
    20. Kim J, Han K, Jin J, Kim H, Kim J, Yun S, Lee Y: Putative Polyketide Synthase and Laccase Genes for Biosynthesis of Aurofusarin in Gibberella zeae . / Appl Environ Microbiol 2005, 71:1701-708. CrossRef
    21. Ukibe K, Hashida K, Yoshida N, Takagi H: Metabolic engineering of Saccharomyces cerevisiae for astaxanthin production and oxidative stress tolerance. / Appl Environ Microbiol 2009, 75:7205-211. CrossRef
    22. Naesby M, Nielsen SV, Nielsen CA, Green T, Tange TO, Simón E, Knechtle P, Hansson A, Schwab MS, Titiz O, Folly C, Archila RE, Maver M, Van Sint Fiet S, Boussemghoune T, Janes M, SS Ka, Sonkar SP, Mitra PP, Benjamin VAK, Korrapati N, Suman I, Hansen EH, Thybo T, Goldsmith N, Sorensen AS: Yeast artificial chromosomes employed for random assembly of biosynthetic pathways and production of diverse compounds in Saccharomyces cerevisiae . / Microb Cell Fact 2009, 8:45. CrossRef
    23. Sikorski R, Hieter P: A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae . / Genetics 1989, 122:19-7.
    24. Fujii I, Watanabe A, Sankawa U, Ebizuka Y: Identification of Claisen cyclase domain in fungal polyketide synthase WA, a naphthopyrone synthase of Aspergillus nidulans . / Chem Biol 2001, 8:189-97. CrossRef
    25. Fujii I, Yasuoka Y, Tsai H-F, Chang YC, Kwon-Chung KJ, Ebizuka Y: Hydrolytic polyketide shortening by ayg1p, a novel enzyme involved in fungal melanin biosynthesis. / J Biol Chem 2004, 279:44613-4620. CrossRef
    26. Chiang Y-M, Meyer KM, Praseuth M, Baker SE, Bruno KS, Wang CCC: Characterization of a polyketide synthase in Aspergillus niger whose product is a precursor for both dihydroxynaphthalene (DHN) melanin and naphtho-γ-pyrone. / Fungal genetics and biology: FG & B 2011, 48:430-37. CrossRef
    27. Siddiqui MS, Thodey K, Trenchard I, Smolke CD: Advancing Secondary Metabolite Biosynthesis in Yeast with Synthetic Biology Tools. / FEMS Yeast Res 2011, 12:144-70. CrossRef
    28. Chiang Y-M, Chang S-L, Oakley BR, Wang CCC: Recent advances in awakening silent biosynthetic gene clusters and linking orphan clusters to natural products in microorganisms. / Curr Opin Chem Biol 2011, 15:137-43. CrossRef
    29. Bok JW, Hoffmeister D, Maggio-Hall La, Murillo R, Glasner JD, Keller NP: Genomic mining for Aspergillus natural products. / Chem Biol 2006, 13:31-7. CrossRef
    30. Geu-Flores F, Nour-Eldin HH, Nielsen MT, Halkier BA: USER fusion: a rapid and efficient method for simultaneous fusion and cloning of multiple PCR products. / Nucleic Acids Res 2007, 35:e55. CrossRef
    31. Wong P, Walter M, Lee W, Mannhaupt G, Münsterk?tter M, Mewes H-W, Adam G, Güldener U: FGDB: revisiting the genome annotation of the plant pathogen Fusarium graminearum . / Nucleic Acids Res 2011, 39:D637-D639. CrossRef
    32. Hansen BG, Salomonsen B, Nielsen MT, Nielsen JB, Hansen NB, Nielsen KF, Regueira TB, Nielsen J, Patil KR, Mortensen UH: Versatile enzyme expression and characterization system for Aspergillus nidulans , with the Penicillium brevicompactum polyketide synthase gene from the mycophenolic acid gene cluster as a test case. / Appl Environ Microbiol 2011, 77:3044-051. CrossRef
    33. Olsen LR, Hansen NB, Bonde MT, Genee HJ, Holm DK, Carlsen S, Hansen BG, Patil KR, Mortensen UH, Wernersson R: PHUSER (Primer Help for USER): a novel tool for USER fusion primer design. / Nucleic Acids Res 2011,39(Suppl 2):W61-W67. CrossRef
    34. Labbé S, Thiele D: Copper ion inducible and repressible promoter systems in yeast. / Methods Enzymol 1999, 306:145-53. CrossRef
    35. Gietz RD, Schiestl RH: High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method. / Nat Protoc 2007, 2:31-4. CrossRef
  • 作者单位:Peter Rugbjerg (1) (2)
    Michael Naesby (1)
    Uffe H Mortensen (2)
    Rasmus JN Frandsen (2)

    1. Evolva SA, Duggingerstrasse 23, Reinach, CH-4153, Switzerland
    2. S?ltofts Plads Building 223, Kgs Lyngby, DK-2800, Denmark
  • ISSN:1475-2859
文摘
Background Fungal polyketides include commercially important pharmaceuticals and food additives, e.g. the cholesterol-lowering statins and the red and orange monascus pigments. Presently, production relies on isolation of the compounds from the natural producers, and systems for heterologous production in easily fermentable and genetically engineerable organisms, such as Saccharomyces cerevisiae and Escherichia coli are desirable. Rubrofusarin is an orange polyketide pigment that is a common intermediate in many different fungal biosynthetic pathways. Results In this study, we established a biosynthetic pathway for rubrofusarin in S. cerevisiae. First, the Fusarium graminearum gene encoding polyketide synthase 12 (PKS12) was heterologously co-expressed with the Aspergillus fumigatus gene encoding phosphopantetheinyl transferase (npgA) resulting in production of YWA1. This aromatic heptaketide intermediate was converted into nor-rubrofusarin upon expression of the dehydratase gene aurZ from the aurofusarin gene cluster of F. graminearum. Final conversion into rubrofusarin was achieved by expression of the O-methyltransferase encoding gene aurJ, also obtained from the aurofusarin gene cluster, resulting in a titer of 1.1?mg/L. Reduced levels of rubrofusarin were detected when expressing PKS12, npgA, and aurJ alone, presumably due to spontaneous conversion of YWA1 to nor-rubrofusarin. However, the co-expression of aurZ resulted in an approx. six-fold increase in rubrofusarin production. Conclusions The reconstructed pathway for rubrofusarin in S. cerevisiae allows the production of a core scaffold molecule with a branch-point role in several fungal polyketide pathways, thus paving the way for production of further natural pigments and bioactive molecules. Furthermore, the reconstruction verifies the suggested pathway, and as such, it is the first example of utilizing a synthetic biological “bottom up-approach for the validation of a complex fungal polyketide pathway.

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