Genetic characterization of emerging coxsackievirus A12 associated with hand, foot and mouth disease in Qingdao, China
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  • 作者:Xiaolin Liu (1)
    Naiying Mao (2)
    Weisen Yu (1)
    Qing Chai (1)
    Hui Wang (1)
    Weidong Wang (1)
    Lijuan Wang (1)
    Zhaoguo Wang (1)
    Wenbo Xu (2)
  • 刊名:Archives of Virology
  • 出版年:2014
  • 出版时间:September 2014
  • 年:2014
  • 卷:159
  • 期:9
  • 页码:2497-2502
  • 全文大小:1,364 KB
  • 参考文献:1. Biswas T (2012) Enterovirus 71 causes hand, foot and mouth disease outbreak in Cambodia. Natl Med J India 25(5):316
    2. Khanh TH, Sabanathan S, Thanh TT, le Thoa PK, Thuong TC, Hang V, Farrar J, Hien TT, Chau N, van Doorn HR (2012) Enterovirus 71-associated hand, foot, and mouth disease, Southern Vietnam, 2011. Emerg Infect Dis 18(12):2002鈥?005. doi:10.3201/eid1812.120929 CrossRef
    3. Zhang Y, Zhu Z, Yang W, Ren J, Tan X, Wang Y, Mao N, Xu S, Zhu S, Cui A, Yan D, Li Q, Dong X, Zhang J, Zhao Y, Wan J, Feng Z, Sun J, Wang S, Li D, Xu W (2010) An emerging recombinant human enterovirus 71 responsible for the 2008 outbreak of hand foot and mouth disease in Fuyang city of China. Virol J 7:94. doi:10.1186/1743-422X-7-94 CrossRef
    4. The annual report of national notifiable communicable disease in 2012 (2013). The National Health and Family Planning Commission of the People鈥檚 Republic of China
    5. Chang LY, Lin TY, Huang YC, Tsao KC, Shih SR, Kuo ML, Ning HC, Chung PW, Kang CM (1999) Comparison of enterovirus 71 and coxsackie-virus A16 clinical illnesses during the Taiwan enterovirus epidemic, 1998. Pediatr Infect Dis J 18(12):1092鈥?096 CrossRef
    6. Puenpa J, Chieochansin T, Linsuwanon P, Korkong S, Thongkomplew S, Vichaiwattana P, Theamboonlers A, Poovorawan Y (2013) Hand, foot, and mouth disease caused by coxsackievirus A6, Thailand, 2012. Emerg Infect Dis 19(4):641鈥?43. doi:10.3201/eid1904.121666 CrossRef
    7. Gopalkrishna V, Patil PR, Patil GP, Chitambar SD (2012) Circulation of multiple enterovirus serotypes causing hand, foot and mouth disease in India. J Med Microbiol 61(Pt 3):420鈥?25. doi:10.1099/jmm.0.036400-0 CrossRef
    8. Lu QB, Zhang XA, Wo Y, Xu HM, Li XJ, Wang XJ, Ding SJ, Chen XD, He C, Liu LJ, Li H, Yang H, Li TY, Liu W, Cao WC (2012) Circulation of Coxsackievirus A10 and A6 in hand-foot-mouth disease in China, 2009鈥?011. PLoS One 7(12):e52073. doi:10.1371/journal.pone.0052073 CrossRef
    9. Itagaki A, Ishihara J, Mochida K, Ito Y, Saito K, Nishino Y, Koike S, Kurimura T (1983) A clustering outbreak of hand, foot, and mouth disease caused by Coxsackie virus A10. Microbiol Immunol 27(11):929鈥?35 CrossRef
    10. Nix WA, Oberste MS, Pallansch MA (2006) Sensitive, seminested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens. J Clin Microbiol 44(8):2698鈥?704 10.1128/JCM.00542-06 CrossRef
    11. Melnick JL, Agol VI, Bachrach HL, Brown F, Cooper PD, Fiers W, Gard S, Gear JH, Ghendon Y, Kasza L, LaPlaca M, Mandel B, McGregor S, Mohanty SB, Plummer G, Rueckert RR, Schaffer FL, Tagaya I, Tyrrell DA, Voroshilova M, Wenner HA (1974) Picornaviridae. Intervirology 4(5):303鈥?16 CrossRef
    12. Oberste MS, Penaranda S, Maher K, Pallansch MA (2004) Complete genome sequences of all members of the species Human enterovirus A. J Gen Virol 85(Pt 6):1597鈥?607 CrossRef
    13. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95鈥?8
    14. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731鈥?739. doi:10.1093/molbev/msr121 CrossRef
    15. Lole KS, Bollinger RC, Paranjape RS, Gadkari D, Kulkarni SS, Novak NG, Ingersoll R, Sheppard HW, Ray SC (1999) Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J Virol 73(1):152鈥?60
    16. Lukashev AN (2005) Role of recombination in evolution of enteroviruses. Rev Med Virol 15(3):157鈥?67. doi:10.1002/rmv.457 CrossRef
  • 作者单位:Xiaolin Liu (1)
    Naiying Mao (2)
    Weisen Yu (1)
    Qing Chai (1)
    Hui Wang (1)
    Weidong Wang (1)
    Lijuan Wang (1)
    Zhaoguo Wang (1)
    Wenbo Xu (2)

    1. Qingdao Center for Disease Control and Prevention, Qingdao, 266033, Shandong, People鈥檚 Republic of China
    2. National Measles Laboratory, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Room 607, Beijing, 102206, People鈥檚 Republic of China
  • ISSN:1432-8798
文摘
To characterize the genetic properties of coxsackievirus A12 (CVA12) strains isolated from hand, foot and mouth disease (HFMD) patients in Qingdao during 2008-2011, the complete genome and VP1 coding region were sequenced and analyzed. Phylogenetic analysis showed that all strains from China clustered into three different branches, suggesting multiple lineages of CVA12 co-circulating in Asia. Sequence analysis indicated a monophyletic group only when the P1 region was examined, indicating possible recombination between CVA12 and other HEV-A serotypes. The emergence of CVA12 involved in an HFMD outbreak in China is a public-health issue.

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