Genetic diversity of Plasmodium vivax in Kolkata, India
详细信息 查看全文
- 作者：Jung-Ryong Kim (1)
Mallika Imwong (1)
Amitabha Nandy (2)
Kesinee Chotivanich (1)
Apichart Nontprasert (1)
Naowarat Tonomsing (1)
Ardhendu Maji (2)
Manjulika Addy (2)
Nick PJ Day (3)
Nicholas J White (1) (3)
Sasithon Pukrittayakamee (1) (4) - 刊名：Malaria Journal
- 出版年：2006
- 出版时间：December 2006
- 年：2006
- 卷：5
- 期：1
- 全文大小：1675KB
- 参考文献：1. Pukrittayakamee S, Chantra A, Simpson JA, Vanijanonta S, Clemens R, Looareesuwan S, White NJ: Therapeutic responses to different antimalarial drugs in vivax malaria. / Antimicrob Agents Chemother 2000, 44: 1680鈥?685. CrossRef
2. Mendis K, Sina BJ, Marchesiri P, Carter R: The neglected burden of Plasmodium vivax malaria. / Am J Trop Med Hyg 2001, 64: 97鈥?06.
3. Dua VK, Kar PK, Sharma VP: Chloroquine resistant Plasmodium vivax malaria in India. / Trop Med Int Heath 1996, 1: 816鈥?19. CrossRef
4. Rieckmann KH, David DR, Hutton DC: Plasmodium vivax resistance to chloroquine? / Lancet 1989, 2: 1183鈥?184. CrossRef
5. Baird JK, Basri H, Purnomo, Bang MJ, Subianto B, Patchen LC, Hoffman SL: Resistance to chloroquine by Plasmodium vivax in Irian Jaya, Indonesia. / Am J Trop Med Hyg 1991, 44: 547鈥?52.
6. Nandy A, Addy M, Maji AK, Bandypadhyay AK: Monitoring the chloroquine sensitivity of Plasmodium vivax from Calcutta and Orissa, India. / Ann Trop Med Parasitol 2003, 97: 215鈥?20. CrossRef
7. Adak T, Sharma VP, Orlov VS: Studies on the Plasmodium vivax relapse pattern in Delhi, India. / Am J Trop Med Hyg 1998, 59: 175鈥?79.
8. Singh N, Mishra SS, Singh MP, Sharma VP: Seasonality of Plasmodium vivax and P. falciparum in tribal villages in central India (1987鈥?995). / Ann Trop Med Parasitol 2000, 94: 101鈥?12. CrossRef
9. Viriyakosol S, Siripoon N, Petcharapirat C, Petcharapirat P, Jarra W, Thaithong S, Brown KN, Snounou G: Genotyping of plasmodium falciparum isolates by the polymerase chain reaction and potential uses in epidemiological studies. / Bull World Health Organization 1995, 73: 85鈥?5.
10. Rosenberg R, Wirtz RA, Lanar DE, Sattabongkot J, Hall T, Waters AP, Prasittisuk C: Circumsporozoite protein heterogeneity in human malaria parasite Plasmodium vivax . / Science 1989, 245: 973鈥?76. CrossRef
11. Kirchgatter K, del Portillo HA: Molecular analysis of Plasmodium vivax relapse using the MSP1 molecule as a genetic marker. / J Infect Dis 1998, 177: 511鈥?15. CrossRef
12. Del Portillo HA, Longacre S, Khouri E, David PH: Primary structure of the merozoite surface antigen 1 of Plasmodium vivax reveals sequences conserved between different Plasmodium species. / Proc Natl Acad Sci USA 1991, 88: 4030鈥?034. CrossRef
13. Premawansa S, Snewin VA, Khouri E, Mendis KN, David PH: Plasmodium vivax : recombination between potential allelic types of the merozoite surface protein MSP1 in parasites isolated from patients. / Exp Parasitol 1993, 76: 192鈥?99. CrossRef
14. Snounou G, Zhu X, Siripoon N, Jarra W, Thaithong S, Brown KN, Viriyakosol S: Biased distribution of msp 1 and msp 2 allelic variants in Plasmodium falciparum populations in Thailand. / Trans R Soc Trop Med Hyg 1999, 93: 369鈥?74. CrossRef
15. Gibson HL, Tucker JE, Kaslow D, Krettli AU, Collins WE, Kiefer MC, Bathurst IC, Barr PJ: Structure and expression of gene for Pv200, a major blood-stage antigen of Plasmodium vivax . / Mol Biochem Parasitol 1992, 50: 325鈥?34. CrossRef
16. Kolakovich KA, Ssengoba A, Wojcik K, Tsuboi T, al Yaman F, Alpers M, Adams JH: Plasmodium vivax : favored gene frequencies of merozoite surface protein-1 and the multiplicity of infection in a malaria endemic region. / Exp Parasitol 1996, 83: 11鈥?9. CrossRef
17. Putaporntip C, Jongwuitiwes S, Tanabe K, Thaithong S: Interallelic recombination in the merozoite surface protein1(MSP1) gene of Plasmodium vivax from Thai isolates. / Mol Biochem Parasitol 1997, 84: 49鈥?6. CrossRef
18. Cui L, Escalante AA, Imwong M, Snounou G: The geneticdiversity of Plasmodium vivax populations. / Trends Parasitol 2003, 19: 220鈥?26. CrossRef
19. Bruce MC, Galinski MR, Barnwell JW, Snounou G, Day KP: Polymorphism at the merozoite surface protein-3 alpha locus of Plasmodium vivax ; global and local diversity. / Am J Trop Med Hyg 1999, 61: 518鈥?25.
20. Bruce MC, Galinski MR, Barnwell JW, Donnelly CA, Warmsley M, Alpers MP, Walliker D, Day KP: Genetic diversity and dynamics of Plasmodium falciparum and P. vivax populations in multiply infected children with asymptomatic malaria infections in Papua New Guinea. / Parasitology 2000, 121: 252鈥?72.
21. Galinski MR, Corredor-Medina C, Povoa M, Crosby J, Ingravallo P, Barnwell JW: Plasmodium vivax merozoite surface protein-3 contains coiled-coil motifs in an alanine-rich central domain. / Mol Biochem Parasitol 1999, 101: 131鈥?47. CrossRef
22. Rayner JC, Huber CS, Feldman D, Ingravallo P, Galinski MR, Barnwell JW: Plasmodium vivax merozoite surface protein PvMSP-3 beta is radically polymorphic through mutation and large insertions and deletions. / Infection, Genetics and Evolution 2004, 4: 309鈥?19. CrossRef
23. Kain KC, Brown AE, Webster HK, Wirtz RA, Keystone JS, Rodriguez MH, Kinahan J, Rowland M, Lanar DE: Circumsporozoite genotyping of global isolates of Plasmodium vivax dried blood specimens. / J Clin Microbiol 1992, 30: 1863鈥?866.
24. Cui L, Mascorro CN, Fan Q, Rzomp KA, Khuntirat B, Zhou G, Chen H, Yan G, Sattabongkot J: Genetic diversity and multiple infections of Plasmodium vivax malaria in Western Thailand. / Am J Trop Med Hyg 2003, 68: 613鈥?19.
25. Joshi H, Subbarao SK, Adak T, Nanda N, Ghosh SK, Carter R, Sharma VP: Genetic sturucture of Plasmodium vivax isolates in India. / Trans R Soc Trop Med Hyg 1997, 91: 231鈥?35. CrossRef
26. Cheng Q, Saul A: Sequence analysis of the apical membrane antigen1 (AMA-1) of Plamodium vivax . / Mol Biochem Parasitol 1994, 65: 183鈥?87. CrossRef
27. Joshi H, Subbarao SK, Raghavendra K, Sharma VP: Plasmodium vivax: Enzyme polymorphism in isolates of Indian origin. / Trans R Soc Trop Med Hyg 1989, 83: 179鈥?81. CrossRef
28. Imwong M, Pukrittayakamee S, Gruner AC, Renia L, Letourneur F, Looareesuwan S, White NJ, Snounou G: Practical PCR genotyping protocols for Plasmodium vivax using Pvcs and Pvmsp1 . / Malar J 2005, 4: 20. CrossRef
29. Imwong M, Pukrittayakamee S, Looareesuwan S, Poirriez J, Pasvol G, White NJ, Snounou G: Plasmodium vivax : polymerase chain reaction amplification artifacts limit the suitability of pvgam 1 as genetic marker. / Exp Parasitol 2001, 99: 175鈥?79. CrossRef
30. Galinski MR, Ingravallo P, Corredor-Medina C, Al-Khedery B, Povoa M, Barnwell JW: Plasmodium vivax merozoite surface proteins-3beta and -3gamma share structual similarities with P. vivax merozoite surface protein-3 alpha and define a new gene family. / Mol Biochem Parasitol 2001, 115: 41鈥?3. CrossRef
31. Lim CS, Kim SH, Kwon SI, Song JW, Song KJ, Lee KN: Analysis of Plasmodium vivax merozoite surface protein-1 gene sequences from resurgent Korean isolates. / Am J Trop Med Hyg 2000, 62: 261鈥?65.
32. Mascorro CN, Zhao K, Khuntirat B, Sattabongkot J, Yan G, Escalante AA, Cui L: Molecular evolution and intragenic recombination of the merozoite surface protein MSP-3 alpha from the malaria parasite Plasmodium vivax in Thailand. / Parasitology 2005, 131: 25鈥?5. CrossRef
33. Kain KC, Keystone J, Franke ED, Lanar DE: Global distribution of a variant of the circumsporozoite gene of Plasmodium vivax . / J Infect Dis 1991, 164: 208鈥?10.
34. Figtree M, Pasay CJ, Slade R, Cheng Q, Cloonan N, Walker J, Saul A: Plasmodium vivax synonymous substitution frequencies, evolution and population structure deduced from diversity in AMA1 and MSP1 genes. / Mol Biochem Parasitol 2000, 108: 53鈥?6. CrossRef
35. Suwanabun N, Sattabongkot J, Wirtz RA, Rosenberg R: The epidemiology of Plasmodium vivax circumsporozoite protein polymorphics in Thailand. / Am J Trop Med Hyg 1994, 50: 460鈥?64.
36. Adak T, Valecha N, Sharma VP: Plasmodium vivax polymorphism in a clinical drug trial. / Clin Diagn Lab Immun 2001, 8: 891鈥?94.
37. Joshi H: Markers for population genetic analysis of human plasmodia species, P falciparum and P.vivax . / J Vector Borne Dis 2003, 40: 78鈥?3.
38. Cochrane AH, Nardin EH, de Arruda M, Maracic M, Clavijo P, Collins WE, Nussenzweig RS: Widespread reactivity of human sera with a variants repeat of the circumsporozoite protein of Plasmodium vivax . / Am J Trop Med Hyg 1990, 43: 446鈥?51.
39. Rayner JC, Corredor V, Feldman D, Ingravallo P, Iderabdullah F, Galinski MR, Barnwell JW: Extensive polymorphism in the Plasmodium vivax merozoite surface coat protein MSP-3 alpha is limited to specific domains. / Parasitology 2002, 125: 393鈥?05. CrossRef
40. Bruce MC, Donnelly CA, Alpers MP, Galinski MR, Barnwell JW, Walliker D, Day KP: Cross-species interactions between malaria parasites in humans. / Science 2000, 287: 845鈥?48. CrossRef
41. Arnot DE, Barnwell JW, Tam JP, Nussenzweig V, Nussenzweig RS, Enea V: Circumsporozoite protein of Plasmodium vivax : gene cloning and characterization of the immunodominant epitope. / Science 1985, 230: 815鈥?18. CrossRef
42. Maestre A, Sunil S, Ahmad G, Mohmmed A, Echeverri M, Corredor M, Blair S, Chauhan VS, Malhotra P: Inter-allelic recombination in the Plasmodium vivax merozoite surface protein I gene among Indian and Colombian isolates. / Malar J 2004, 3: 4. CrossRef - 作者单位：Jung-Ryong Kim (1)
Mallika Imwong (1)
Amitabha Nandy (2)
Kesinee Chotivanich (1)
Apichart Nontprasert (1)
Naowarat Tonomsing (1)
Ardhendu Maji (2)
Manjulika Addy (2)
Nick PJ Day (3)
Nicholas J White (1) (3)
Sasithon Pukrittayakamee (1) (4)
1. Department of Clinical Tropical Medicine, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand
2. Department of Parasitology and Protozoology, the Calcutta School of Tropical Medicine, Kolkata, India
3. Centre for Clinical Vaccinology and Tropical Medicine, Churchill Hospital, Old Road, Headington, OX3 7LJ, Oxfordshire, UK
4. The Royal Institute of Thailand, Grand Palace, Bangkok, Thailand
文摘
Background Plasmodium vivax malaria accounts for approximately 60% of malaria cases in Kolkata, India. There has been limited information on the genotypic polymorphism of P. vivax in this malaria endemic area. Three highly polymorphic and single copy genes were selected for a study of genetic diversity in Kolkata strains. Methods Blood from 151 patients with P. vivax infection diagnosed in Kolkata between April 2003 and September 2004 was genotyped at three polymorphic loci: the P. vivax circumsporozoite protein (pvcs), the merozoite surface protein 1 (pvmsp 1) and the merozoite surface protein 3-alpha (pvmsp 3-alpha). Results Analysis of these three genetic markers revealed that P. vivax populations in Kolkata are highly diverse. A large number of distinguishable alleles were found from three genetic markers: 11 for pvcs, 35 for pvmsp 1 and 37 for pvmsp 3-alpha. These were, in general, randomly distributed amongst the isolates. Among the 151 isolates, 142 unique genotypes were detected the commonest genotype at a frequency of less than 2% (3/151). The overall rate of mixed genotype infections was 10.6%. Conclusion These results indicate that the P. vivax parasite population is highly diverse in Kolkata, despite the low level of transmission. The genotyping protocols used in this study may be useful for differentiating re-infection from relapse and recrudescence in studies assessing of malarial drug efficacy in vivax malaria.