Development of a molecular method for the rapid screening and identification of the three functionally relevant polymorphisms in the human TAS2R38 receptor gene in studies of sensitivity to the bitter taste of PROP
详细信息    查看全文
  • 作者:Roberto Orr霉 ; Elena Atzori ; Alessandra Padiglia
  • 关键词:Bitter taste ; TAS2R38 ; PROP taster status ; PCR ; RFLP ; CA6
  • 刊名:SpringerPlus
  • 出版年:2015
  • 出版时间:December 2015
  • 年:2015
  • 卷:4
  • 期:1
  • 全文大小:1489KB
  • 参考文献:Avenet P, Lindemann B (1989) Perspectives of taste reception. J Membr Biol 112:1鈥?CrossRef
    Baranowski T, Baranowski JC, Watson KB, Jago R, Islam N, Beltran A et al (2011) 6-n-propylthiouracil taster status not related to reported cruciferous vegetable intake among ethnically diverse children. Nutr Res 31:594鈥?00. doi:10.鈥?016/鈥媕.鈥媙utres.鈥?011.鈥?7.鈥?04 CrossRef
    Tomassini Barbarossa I, Atzori E, Zonza A, Padiglia A (2011) A rapid screening method for the identification of a single-nucleotide polymorphism in the carbonic anhydrase VI gene in studies of sensitivity to the bitter taste of 6-n-propylthiouracil. Genet Test Mol Biomark 15:721鈥?24. doi:10.鈥?089/鈥媑tmb.鈥?011.鈥?040 CrossRef
    Bartoshuk LM (2000) Comparing sensory experiences across individuals: recent psychophysical advances illuminate genetic variation in taste perception. Chem Senses 25:447鈥?60. doi:10.鈥?093/鈥媍hemse/鈥?5.鈥?.鈥?47 CrossRef
    Behrens M, Meyerhof W (2006) Bitter taste receptors and human bitter taste perception. Cell Mol Life Sci 63:1501鈥?509. doi:10.鈥?007/鈥媠00018-006-6113-8 CrossRef
    Bell KI, Tepper BJ (2006) Short-term vegetable intake by young children classified by 6-n-propylthoiuracil bitter-taste phenotype. Am J Clin Nutr 84:245鈥?51
    Bering AB, Pickering G, Liang P (2014) TAS2R38 single nucleotide polymorphisms are associated with prop鈥攂ut not thermal鈥攖asting: a pilot study. Chem Percept 7:23鈥?0. doi:10.鈥?007/鈥媠12078-013-9160-1 CrossRef
    Bufe B, Breslin PA, Kuhn C, Reed DR, Tharp CD, Slack JP et al (2005) The molecular basis of individual differences in phenylthiocarbamide and propylthiouracil bitterness perception. Curr Biol 15:322鈥?27. doi:10.鈥?016/鈥媕.鈥媍ub.鈥?005.鈥?1.鈥?47 CrossRef
    Cal貌 C, Padiglia A, Zonza A, Corrias L, Contu P, Tepper BJ et al (2011) Polymorphisms in TAS2R38 and the taste bud trophic factor, gustin gene co-operate in modulating PROP taste phenotype. Physiol Behav 104:1065鈥?071. doi:10.鈥?016/鈥媕.鈥媝hysbeh.鈥?011.鈥?6.鈥?13 CrossRef
    Dinehart ME, Hayes JE, Bartoshuk LM, Lanier SL, Duffy VB (2006) Bitter taste markers explain variability in vegetable sweetness, bitterness, and intake. Physiol Behav 87:304鈥?13. doi:10.鈥?016/鈥媕.鈥媝hysbeh.鈥?005.鈥?0.鈥?18 CrossRef
    Drayna D, Coon H, Kim UK, Elsner T, Cromer K, Otterud B et al (2003) Genetic analysis of a complex trait in the Utah Genetic Reference Project: a major locus for PTC taste ability on chromosome 7q and a secondary locus on chromosome 16p. Hum Genet 112:567鈥?72. doi:10.鈥?007/鈥媠00439-003-0911-y
    Drewnowski A, Henderson SA, Cockroft JE (2007) Genetic sensitivity to 6-n-propylthiouracil has no influence on dietary patterns, body mass indexes, or plasma lipid profiles of women. J Am Diet Assoc 107:1340鈥?348. doi:10.鈥?016/鈥媕.鈥媕ada.鈥?007.鈥?5.鈥?13 CrossRef
    Duffy VB, Bartoshuk LM, Lucchina LA, Snyder DJ, Tym A (1996) Supertasters of PROP (6-n-propylthiouracil) rate the highest creaminess to high-fat milk products. Chem Senses 21:598. doi:10.鈥?093/鈥媍hemse/鈥?1.鈥?.鈥?73
    Duffy VB, Davidson AC, Kidd JR, Kidd KK, Speed WC, Pakstis AJ et al (2004) Bitter receptor gene (TAS2R38), 6-n-propylthiouracil (PROP) bitterness and alcohol intake. Alcohol Clin Exp Res 28(11):1629鈥?637. doi:10.鈥?097/鈥?1.鈥婣LC.鈥?000145789.鈥?5183.鈥婦4 CrossRef
    Feeney EL, Hayes JE (2014) Exploring associations between taste perception, oral anatomy and polymorphisms in the carbonic anhydrase (gustin) gene CA6. Physiol Behav 128:148鈥?54. doi:10.鈥?016/鈥媕.鈥媝hysbeh.鈥?014.鈥?2.鈥?13 CrossRef
    Genick UK, Kutalik Z, Ledda M, Destito MC, Souza MM, Cirillo CA et al (2011) Sensitivity of genome-wide-association signals to phenotyping strategy: the PROP-TAS2R38 taste association as a benchmark. PLoS One 6:e27745. doi:10.鈥?371/鈥媕ournal.鈥媝one.鈥?027745 CrossRef
    Hamilton RB, Norgren R (1984) Central projections of gustatory nerves in the rat. J Comp Neurol 222:560鈥?77. doi:10.鈥?002/鈥媍ne.鈥?02220408 CrossRef
    Hayes JE, Duffy VB (2007) Revisiting sugar-fat mixtures: sweetness and creaminess vary with phenotypic markers of oral sensation. Chem Senses 32:225鈥?36. doi:10.鈥?093/鈥媍hemse/鈥媌jl050 CrossRef
    Herring A, Inglis N, Ojeh C, Snodgrass D, Merizies J (1982) Rapid diagnosis of rotavirus infection by direct detection of viral nucleic acid in silver-stained polyacrylamide gels. J Clin Microbiol 16:473鈥?77
    Horn T, Castilho L, Moulds JM, Billingsley K, Vege S, Johnson N et al (2012) A novel JKA allele, nt561C >A, associated with silencing of Kidd expression. Transfusion 52:1092鈥?096. doi:10.鈥?111/鈥媕.鈥?537-2995.鈥?011.鈥?3399.鈥媥 CrossRef
    Jiang L, Yin X, Yin C, Zhou S, Dan W, Sun X (2011) Different quantitative EEG alterations induced by TBI among patients with different APOE genotypes. Neurosci Lett 505:160鈥?64. doi:10.鈥?016/鈥媕.鈥媙eulet.鈥?011.鈥?0.鈥?11 CrossRef
    Keller KL, Steinmann L, Nurse RJ, Tepper BJ (2002) Genetic taste sensitivity to 6-n-prophylthiouracil influences food preference and reported food intake in preschool children. Appetite 38:3鈥?2. doi:10.鈥?006/鈥媋ppe.鈥?001.鈥?441 CrossRef
    Kim UK, Drayna D (2004) Genetics of individual differences in bitter taste perception: lessons from the PTC gene. Clin Genet 67:275鈥?80. doi:10.鈥?111/鈥媕.鈥?399-0004.鈥?004.鈥?0361.鈥媥 CrossRef
    Kim UK, Jorgenson E, Coon H, Leppert M, Risch N, Drayna D (2003) Positional cloning of the human quantitative trait locus underlying taste sensitivity to phenylthiocarbamide. Science 299:1221鈥?225. doi:10.鈥?126/鈥媠cience.鈥?080190 CrossRef
    Lindemann B (1996) Taste reception. Physiol Rev 76:718鈥?66
    Liu Y, Huang L, Lu Y, Xi XE, Huang XL, Lu Q et al (2015) Relationships between the osteocalcin gene polymorphisms, serum osteocalcin levels, and hepatitis B virus-related hepatocellular carcinoma in a chinese population. PLoS One 10:e0116479. doi:10.鈥?371/鈥媕ournal.鈥媝one.鈥?116479 CrossRef
    Margolskee RF (2001) Molecular mechanisms of bitter and sweet taste transduction. JBC 277:1鈥?. doi:10.鈥?074/鈥媕bc.鈥婻100054200 CrossRef
    Melis M, Atzori E, Cabras S, Zonza A, Cal貌 C, Muroni P et al (2013) The gustin (ca6) gene polymorphism, rs2274333 (A/G), as a mechanistic link between prop tasting and fungiform taste papilla density and maintenance. PLoS One 8:e74151. doi:10.鈥?371/鈥媕ournal.鈥媝one.鈥?074151 CrossRef
    Padiglia A, Zonza A, Atzori E, Chillotti C, Cal貌 C, Tepper BJ et al (2010) Sensitivity to 6-n-propylthiouracil is associated with gustin (carbonic anhydrase VI) gene polymorphism, salivary zinc, and body mass index in humans. Am J Clin Nutr 92:539鈥?45. doi:10.鈥?945/鈥媋jcn.鈥?010.鈥?9418 CrossRef
    Prodi DA, Drayna D, Forabosco P, Palmas MA, Maestrale GB, Piras D et al (2004) Bitter Taste Study in a sardinian genetic isolate supports the association of phenylthiocarbamide sensitivity to the TAS2R38 bitter receptor gene. Chem Senses 29:697鈥?02. doi:10.鈥?093/鈥媍hemse/鈥媌jh074 CrossRef
    Rankin KM, Godinot N, Christensen CM, Tepper BJ, Kirkmeyer SV (2004) Assessment of different methods for 6-n-propylthiouracil status classification. In: Prescott J, Tepper BJ (eds) Genetic variation in taste sensitivity. Marcel Dekker, New York, pp 63鈥?8. doi: 10.鈥?201/鈥?780203023433.鈥媍h3
    Robino A, Mezzavilla M, Pirastu N, Dognini M, Tepper BJ, Gasparini P (2014) A population-based approach to study the impact of PROP perception on food liking in populations along the silk road. PLoS One 9:e91716. doi:10.鈥?371/鈥媕ournal.鈥媝one.鈥?091716 CrossRef
    Sambrook J, Fritstch E, Maniatis T (1989) Molecular cloning. A laboratory manual, 2nd edn. Cold Spring Harbor Laboratory, New York
    Tepper BJ (2008) Nutritional implications of genetic taste variation: the role of PROP sensitivity and other taste phenotypes. Annu Rev Nutr 28:367鈥?88. doi:10.鈥?146/鈥媋nnurev.鈥媙utr.鈥?8.鈥?61807.鈥?55458 CrossRef
    Tepper BJ, Nurse RJ (1998) PROP taster status is related to fat perception and preference. Ann N Y Acad Sci 855:802鈥?04. doi:10.鈥?111/鈥媕.鈥?749-6632.鈥?998.鈥媡b10662.鈥媥 CrossRef
    Tepper BJ, Cao J, Christensen CM (2001) Development of brief methods to classify individuals by PROP taster status. Physiol Behav 73:571鈥?77. doi:10.鈥?016/鈥婼0031-9384(01)00500-5 CrossRef
    Timpson NJ, Christensen M, Lawlor DA (2005) TAS2R38 (phenylthiocarbamide) haplotypes, coronary heart disease traits, and eating behaviour in the British Women鈥檚 Heart and Health Study. Am J Clin Nutr 81:1005鈥?011
    Ueda T, Ugawa S, Yamamura H, Imaizumi Y, Shimada S (2003) Functional interaction between T2R taste receptors and g-protein subunits expressed in taste receptor cells. J Neurosci 23:7376鈥?380
    Wiener A, Shudler M, Levit A, Niv MY (2012) BitterDB: a database of bitter compounds. Nucleic Acids Res 40(Database issue):D413鈥揇419. doi:10.鈥?093/鈥媙ar/鈥媑kr755 CrossRef
    Wooding S, Kim UK, Bamshad MJ, Larsen J, Jorde LB, Drayna D (2004) Natural selection and molecular evolution in PTC, a bitter-taste receptor gene. Am J Hum Genet 74:637鈥?46. doi:10.鈥?086/鈥?83092 CrossRef
  • 作者单位:Roberto Orr霉 (1)
    Elena Atzori (1)
    Alessandra Padiglia (1)

    1. Department of Life and Environment Sciences, University of Cagliari, 09042, Monserrato, CA, Italy
  • 刊物类别:Science, general;
  • 刊物主题:Science, general;
  • 出版者:Springer International Publishing
  • ISSN:2193-1801
文摘
The objective of this work was to develop a rapid screening method to identify the three single nucleotide polymorphisms (SNPs) in the TAS2R38 gene, with the aim of providing a significant contribution to studies designed to assess sensitivity to the bitter taste of 6-n-propylthiouracil (PROP). Specifically, the objective of this study was to characterize the TAS2R38 gene haplotypes in a group of 60 subjects with variable sensitivity to PROP and preliminarily genotyped for the rs2274333 allele (A/G) of carbonic anhydrase isoform VI gene (CA6). The molecular characterization of the TAS2R38 gene was conducted using the PCR-restriction fragment length polymorphism technique after creating artificial restriction sites upstream or downstream of the SNPs, as none of the three polymorphisms contributes to the formation of a restriction site for a specific endonuclease. The results indicate that the method described in this paper could be a valid and simple experimental strategy to identify genetic differences related to taste sensitivity to bitter taste, and could be applied as a nutrigenetics test in studies aimed at understanding people鈥檚 eating behaviors. Keywords Bitter taste TAS2R38 PROP taster status PCR-RFLP CA6

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700