Proteomic Analysis of PEG-Induced Drought Stress Responsive Protein in TERF1 Overexpressed Sugarcane (Saccharum officinarum) Leaves

详细信息    查看全文

• 作者：M. Anisur Rahman ; Lei Ren ; Wei Wu ; Yanchun Yan
• 关键词：Proteomics ; PEG stress ; TERF1 overexpression ; Sugarcane ; 2 ; DE ; Mass spectrometry
• 刊名：Plant Molecular Biology Reporter
• 出版年：2015
• 出版时间：June 2015
• 年：2015
• 卷：33
• 期：3
• 页码：716-730
• 全文大小：904 KB
• 参考文献：Aghaei K, Ehsanpour AA, Komatsu S (2008) Proteome analysis of potato under salt stress. J Proteome Res 7:4858鈥?868View Article PubMed
  Agrawal GK, Jwa NS, Rakwal R (2009) Rice proteomics: ending phase I and the beginning of phase II. Proteomics 9:935鈥?63View Article PubMed
  Ali GM, Komatsu S (2006) Proteomic analysis of rice leaf sheath during drought stress. J Proteome Res 5:396鈥?03View Article PubMed
  Amalraj RS, Selvaraj N, Veluswamy GK et al (2010) Sugarcane proteomics: establishment of a protein extraction method for 2-DE in stalk tissues and initiation of sugarcane proteome reference map. Electrophoresis 31:1959鈥?974View Article PubMed
  Bae MS, Cho EJ, Choi EY et al (2003) Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Plant J 36:652鈥?63View Article PubMed
  Bandehagh A, Uliaie ED, Salekdeh GH (2013) Proteomic analysis of rapeseed (Brassica napus L.) seedling roots under salt stress. Anal Biol Res 4(7):212鈥?21
  Benesova M, Hola D, Fischer L et al. (2012) The physiology and proteomics of drought tolerance in maize: early stomatal closure as a cause of lower tolerance to short-term dehydration? PLoS ONE 7:e38017.10.鈥?371/鈥媕ournal.鈥媝one.鈥?038017
  Bevan M, Bancroft I, Bent E et al (1998) Analysis of 1.9聽Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana. Nature 391:485鈥?88View Article PubMed
  Bommer UA, Borovjagin AV, Greagg MA et al (2002) The mRNA of the translationally controlled tumour protein P23/TCTP is a highly structured RNA, which activates the dsRNA-dependent protein kinase PKR. RNA 8(4):478鈥?96View Article PubMed Central PubMed
  Bradford MM (1976) Anal Biochem 72:248鈥?54View Article PubMed
  Breton G, Danyluk J, Charron JBF et al (2003) Expression profiling and bioinformatic analyses of a novel stress-regulated multispanning transmembrane protein family from cereals and arabidopsis. Plant Physiol 132:64鈥?4View Article PubMed Central PubMed
  Cao BH, Lu YQ, Chen GJ et al (2010) Functional characterization of the translationally controlled tumor protein (TCTP) gene associated with growth and defense response in cabbage. Plant Cell Tiss Organ Cult 103(2):217鈥?26View Article
  Castillejo M脕, Maldonado AM, Ogueta S et al (2008) Proteomic analysis of responses to drought stress in sunflower (Helianthus annuus) leaves by 2DE gel electrophoresis and mass spectrometry. Open Proteomics J 1:59鈥?1View Article
  Cha-um S, Wangmoon S, Mongkolsiriwatana C et al (2012) Evaluating sugarcane (Saccharum sp.) cultivars for water deficit tolerance using some key physiological markers. Plant Biotechnol 29:431鈥?39View Article
  Dhanda SS, Sethi GS (1998) Inheritance of excised-leaf water loss and relative water content in bread wheat (Triticum aestivum). Euphytica 104:39鈥?7View Article
  Ding C, You J, Liu Z et al (2011) Proteomic analysis of low nitrogen stress-responsive proteins in roots of rice. Plant Mol Biol Rep 29:618鈥?25View Article
  Dixon DP, Cummins I, Cole DJ et al (1998) Glutathione-mediated detoxification systems in plants. Curr Opin Plant Biol 1:258鈥?66View Article PubMed
  Edwards GE, Franceschi VR, Voznesenskaya EV (2004) Single-cell C4 photosynthesis versus the dual-cell (Kranz) paradigm. Annu Rev Plant Biol 55:173鈥?96View Article PubMed
  Falvo S, Acquadro A, Albo AG et al (2011) Proteomic analysis of PEG-fractionated UV-C stress-response proteins in globe artichoke. Plant Mol Biol Rep 30:111鈥?22View Article
  Foyer CH, Lopez-Delgado H, Dat JF et al (1997) Hydrogen peroxide- and glutathione-associated mechanisms of acclimatory stress tolerance and signalling. Physiol Plant 100:241鈥?54View Article
  Fuglsang AT, Guo Y, Cuin TA et al (2007) Arabidopsis protein kinase PKS5 inhibits the plasma membrane H鈥?鈥夆垝ATPase by preventing interaction with 14-3-3 protein. Plant Cell 19:1617鈥?634View Article PubMed Central PubMed
  Fujii S, Small I (2011) The evolution of RNA editing and pentatricopeptide repeat genes. New Phytol 191:37鈥?7View Article PubMed
  Fukuyama K (2004) Structure and function of plant type ferredoxins. Photosynth Res 81:289鈥?01View Article PubMed
  Gao S, Zhang H, Tian Y et al (2008) Expression of TERF1 in rice regulates expression of stress responsive genes and enhances tolerance to drought and high salinity. Plant Cell Rep 27:1787鈥?795View Article PubMed
  Hajheidari M, Abdollahian-Noghabi M, Askari H et al (2005) Proteome analysis of sugar beet leaves under drought stress. Proteomics 5:950鈥?60View Article PubMed
  Hancock JT, Henson D, Nyirenda M et al (2005) Proteomic identification of glyceraldehydes 3-phosphate dehydrogenase as an inhibitory target of hydrogen peroxide in Arabidopsis. Plant Physiol Biochem 43:828鈥?35View Article PubMed
  Heckathorn SA, Ryan SL, Baylis JA et al (2002) In vivo evidence from an Agrostis stolonifera selection genotype that chloroplast small heat-shock proteins can protect photosystem II during heat stress. Funct Plant Biol 29:935鈥?46View Article
  Huo CM, Zhao BC, Ge RC et al (2004) Proteomic analysis of the salt tolerance mutant of wheat under salt stress. Yi Chuan Xue Bao 31:1408鈥?414PubMed
  Jangpromma N, Kitthaisong S, Lomthaisong K et al (2010) A proteomics analysis of drought stress responsive proteins as biomarker for drought-tolerant sugarcane cultivars. Am J Biochem Biotechnol 6:89鈥?02View Article
  Jeanneau M, Gerentes D, Foueillassar X et al (2002) Improvement of drought tolerance in maize: towards the functional validation of the Zm-Asr1 gene and increase of water use efficiency by over-expressing C4-PEPC. Biochimie 84:1127鈥?135View Article PubMed
  Kim ST, Kang YH, Wang Y et al (2009) Secretome analysis of differentially induced proteins in rice suspension cultured cells triggered by rice blast fungus and elicitor. Proteomics 9:1302鈥?313View Article PubMed
  Kim SG, Wang Y, Wu J et al (2011) Physiological and proteomic analysis of young rice leaves grown under nitrogen starvation conditions. Plant Biotechnol Rep 5:309鈥?15View Article
  Laclau PB, Laclau J-P (2009) Growth of the whole root system for a plant crop of sugarcane under rainfed and irrigated environments in Brazil. Field Crops Res 114:351鈥?60View Article
  Levitt J (1980) Responses of plants to environmental stresses. Academic, London
  Li G, Lu XY, Li XP et al (2010) Cloning of a TCTP gene in wheat and its expression induced by Erysiphe graminis. Bull Bot Res 30(4):441鈥?47
  Licausi F, Giorgi FM, Zenoni S et al (2010) Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera. BMC Genomics 11:719鈥?34View Article PubMed Central PubMed
  Long SP, Ort DR (2010) More than taking the heat: crops and global change. Curr Opin Plant Biol 13:1鈥?View Article
  L眉thje S, D枚ring O, Heuer S et al (1997) Oxidoreductase activity in plant. Biochim Biophys Acta 1331(1):81鈥?02View Article PubMed
  Matin MA, Brown JH, Ferguson H (1989) Leaf water potential, relative water content, and diffusive resistance as screening techniques for drought resistance in barley. Agronomy J 81:100鈥?05View Article
  Merewitz EB, Gianfagna T, Huang B (2011) Protein accumulation in leaves and roots associated with improved drought tolerance in creeping bentgrass expressing an ipt gene for cytokinin synthesis. J Exp Bot 62(15):5311鈥?333View Article PubMed Central PubMed
  Michelet B, Boutry M (1995) The plasma membrane H1-ATPase. A highly regulated enzyme with multiple physiological functions. Plant Physiol 108:1鈥?PubMed Central PubMed
  Mittler R, Vanderauwera S, Gollery M et al (2004) Reactive oxygen gene network of plants. Trends Plant Sci 9(10):490鈥?98View Article PubMed
  Moran R (1982) Formulae for determination of chlorophyllous pigments extracted with N, N-Dimethylformamide. Plant Physiol 69:1376鈥?381View Article PubMed Central PubMed
  Ngamhui N-O, Akkasaeng C, Zhu YJ et al (2012) Differentially expressed proteins in sugarcane leaves in response to water deficit stress. Plant Omics J 5(4):365鈥?71
  Ngara R, Ndimba R, Borch-Jensen J et al (2012) Identification and profiling of salinity stress-responsive proteins in Sorghum bicolor seedlings. J Proteomics 75:4139鈥?150View Article PubMed
  Noctor G, Arisi ACM, Juanin L et al (1997) The role of glycine in determining the rate of glutathione synthesis in poplar. Possible implications for glutathione production during stress. Physiol Plant 100:255鈥?63View Article
  Nouri M-Z, Komatsu S (2010) Comparative analysis of soybean plasma membrane proteins under osmotic stress using gel-based and LC MS/MS-based proteomics approaches. Proteomics 10:1930鈥?945View Article PubMed
  Parry MAJ, Keys AJ, Madgwick PJ et al (2008) Rubisco regulation: a role for inhibitors. J Exp Bot 23:1鈥?2
  Plomion C, Lalanne C, Claverol S et al (2006) Mapping the proteome of poplar and application to the discovery of drought stress responsive proteins. Proteomics 6:6509鈥?527View Article PubMed
  Prabu GR, Kawar PG, Pagariya MC et al (2011) Identification of water deficit stress upregulated genes in sugarcane. Plant Mol Biol Rep 29:291鈥?04View Article
  Quail PH (2002) Photosensory perception and signalling in plant cells: new paradigms? Curr Opin Cell Biol 14:180鈥?88View Article PubMed
  Richmond T (2000) Higher plant cellulose synthases. Genome Biol 1(4):1鈥?View Article
  S鈥檃nchez-Fern鈥檃ndez R, Fricker M, Corben LB (1997) Cell proliferation and hair tip growth in the Arabidopsis root are under mechanistically different forms of redox control. Proc Natl Acad Sci U S A 94:2745鈥?750View Article
  Sage RF (2004) The evolution of C4 photosynthesis. New Phytol 161:341鈥?70View Article
  Sehnke PC, DeLille JM, Ferl RJ (2002) Consummating signal transduction: the role of 14-3-3 proteins in the completion of signal-induced transitions in protein activity. Plant Cell 14:S339鈥揝354PubMed Central PubMed
  Seki M, Kamei A, Yamaguchi-Shinozaki K et al (2003) Molecular responses to drought, salinity and frost: common and different paths for plant protection. Curr Opin Biotechnol 14:194鈥?99View Article PubMed
  Sharma AD, Singh P (2003) Comparative studies on drought-induced changes in peptidyl prolyl cis鈥搕rans isomerase activity in drought-tolerant and susceptible cultivars of Sorghum bicolor. Curr Sci 84(7):911鈥?18
  Sharoni AM, Nuruzzaman M, Satoh K et al (2011) Gene structures, classification and expression models of the AP2/EREBP transcription factor family in rice. Plant Cell Physiol 52:344鈥?60View Article PubMed
  Shinozaki K, Yamaguchi-Shinozaki K (2007) Gene networks involved in drought stress response and tolerance. J Exp Bot 58:221鈥?27View Article PubMed
  Shinozaki K, Yamaguchi-Shinozaki K, Seki M (2003) Regulatory network of gene expression in the drought and cold stress responses. Curr Opin Plant Biol 6:410鈥?17View Article PubMed
  Silva MDA, Jifon JL, de Silva JAG et al (2007) Use of physiological parameters as fast tools to screen for drought tolerance in sugarcane. Braz J Plant Physiol 19:193鈥?01View Article
  Singh KB, Rhonda CF, O帽ate-S谩nchez L (2002) Transcription factors in plant defense and stress responses. Curr Opin Plant Biol 5:430鈥?36View Article PubMed
  Soussi M, Ocana A, Lluch C (1998) Effects of salt stress on growth, photosynthesis and nitrogen fixation in chick-pea (Cicer arietinum L.). J Exp Bot 49:1329鈥?337View Article
  Swami AK, Alam SI, Sengupta N et al (2011) Differential proteomic analysis of salt stress response in Sorghum bicolor leaves. Env Exp Bot 71:321鈥?28View Article
  Tai FJ, Yuan ZL, Wu XL et al (2011) Identification of membrane proteins in maize leaves, altered in expression under drought stress through polyethylene glycol treatment. Plant Omics J 4(5):250鈥?56
  Tian Y, Zhang H, Pan X et al (2010) Overexpression of ethylene response factor TERF2 confers cold tolerance in rice seedlings. Transgenic Res 20:857鈥?66View Article PubMed
  Van den Wijngaard PW, Sinnige MP, Roobeek I et al (2005) Abscisic acid and 14-3-3 proteins control K channel activity in barley embryonic root. Plant J 41:43鈥?5View Article PubMed
  Xiong L, Zhu JK (2002) Molecular and genetic aspects of plant responses to osmotic stress. Plant Cell Env 25:131鈥?39View Article
  Xu CP, Huang BR (2010) Comparative analysis of drought responsive proteins in Kentucky bluegrass cultivars contrasting in drought tolerance. Crop Sci 50:2543鈥?552View Article
  Xu WF, Shi WM (2006) Expression profiling of the 14-3-3 gene family in response to salt stress and potassium and iron deficiencies in young tomato (Solanum lycopersicum) roots: analysis by real-time RT-PCR. Anal Bot 98:965鈥?74View Article
  Xu A, Bellamy AR, Taylor JA (1999) Expression of translationally controlled tumour protein is regulated by calcium at both the transcriptional and post-transcriptional level. Biochemical J 342:683鈥?89View Article
  Xu ZS, Chen M, Li LC et al (2008) Functions of the ERF transcription factor family in plants. Botany 86:969鈥?77View Article
  Yan SP, Zhang QY, Tang ZC et al (2006) Comparative proteomic analysis provides new insights into chilling stress responses in rice. Mol Cell Proteomics 5:484鈥?6View Article PubMed
  Zhao D, Glaz B, Comstock JC (2010) Sugarcane response to water-deficit stress during early growth on organic and sand soils. Am J Agric Biol Sci 5:403鈥?14View Article
  Zhao Y, Du HM, Wang ZL et al (2011) Identification of proteins associated with water-deficit tolerance in C (4) perennial grass species, Cynodon dactylon x Cynodon transvaalensis and Cynodon dactylon. Physiol Plant 141:40鈥?5View Article PubMed
  Zhou G, Yang L-T, Li YR et al (2012) Proteomic analysis of osmotic stress-responsive proteins in sugarcane leaves. Plant Mol Biol Rep 30:349鈥?59View Article
  Zhu Q, Zhang J, Gao X et al (2010) The Arabidopsis AP2/ERF transcription factor RAP2.6 participates in ABA, salt and osmotic stress responses. Gene 457:1鈥?2View Article PubMed
  
• 作者单位：M. Anisur Rahman (1) (2)
  Lei Ren (1)
  Wei Wu (1)
  Yanchun Yan (1)
  
  1. Graduate School, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
  2. Bangladesh Sugarcane Research Institute, Ishurdi 6620, Pabna, Bangladesh
  
• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Life Sciences
  Plant Sciences
  Plant Physiology
  
• 出版者：Springer Netherlands
• ISSN：1572-9818

文摘

Drought is the major abiotic stress limiting sugarcane growth and productivity. ERF proteins regulate a variety of stress responses in plant. Overexpression of TERF1 can enhance the tolerance of transgenic sugarcane to drought stress. To improve the efficiency of sugarcane breeding, better understanding of the tolerance mechanism at molecular level is required. Two-dimensional gel electrophoresis (2-DE) coupled tandem mass spectrometry (MS/MS) analyses were conducted to compare the leaf proteome of the TERF1 OE and WT sugarcane plants to PEG stress. Using statistical program, 50 significantly differential protein spots were detected, of which 36 spots were identified by PMF and MS/MS fragmentation. Most of the identified proteins corresponded to metabolism, energy, protein synthesis, and disease/defense. Results implicated that the involvement of different metabolic pathways that may be activated in the TERF1 overexpressed transgenic sugarcane to cope with drought environment. Of the identified proteins, abundance of pentatricopeptide repeat (PPR) containing protein and peptidyl prolyl cis-trans isomerase (PPIase) were decreased, but the abundance of vital proteins, such as metabolism protein (14-3-3 like protein), photosynthetic protein (RuBisCO large subunit, PEP carboxylase), ferredoxin, glyceraldehyde 3-phosphate dehydrogenase, elongation factor Tu, several small heat shock proteins, and peroxidases were increased. Analysis of protein properties showed that majority of the differentially abundant proteins associated with drought were stable, hydrophilic, and transmembrane proteins. Thus, the results of our study unravel the regulatory mechanism of TERF1 for drought stress tolerance of transgenic sugarcane and provide new insight into adaptation to osmotic stress through altering the expression of particular proteins.