Identification of chromosome regions controlling seed storage proteins of narrow-leafed lupin (Lupinus angustifolius)
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  • 作者:Xin Li (1)
    Shahidul Islam (1)
    Huaan Yang (2)
    Wujun Ma (3)
    Guijun Yan (1)
  • 关键词:Genetic linkage ; Lupinus angustifolius ; MALDI ; TOF ; Narrow ; leafed lupin ; Protein peaks
  • 刊名:Journal of Plant Research
  • 出版年:2013
  • 出版时间:May 2013
  • 年:2013
  • 卷:126
  • 期:3
  • 页码:395-401
  • 全文大小:378KB
  • 参考文献:1. Bartels D, Thompson RD (1986) Synthesis of messenger-RNAs coding for abundant endosperm proteins during wheat grain development. Plant Sci 46:117鈥?25 CrossRef
    2. Boersma JG, Pallotta M, Li CD, Buirchell BJ, Sivasithamparam K, Yang H (2005) Construction of a genetic linkage map using MFLP and identification of molecular markers linked to domestication genes in narrow-leafed lupin ( / Lupinus angustifolius L.). Cell Mol Biol Lett 10:331鈥?44
    3. Campbell MA, Haas BJ, Hamilton JP, Mount SM, Buell CR (2006) Comprehensive analysis of alternative splicing in rice and comparative analyses with / Arabidopsis. BMC Genomics 7:327 CrossRef
    4. Chen J, Lan P, Tarr A, Yan YM, Francki M, Appels R, Ma W (2007) Matrix-assisted laser desorption/ionization time-of-flight based wheat gliadin protein peaks are useful molecular markers for wheat genetic study. Rapid Commun Mass Spectrom 21:2913鈥?917 CrossRef
    5. Duranti M, Consonni A, Magni C, Sessa F, Scarafoni A (2008) The major proteins of lupin seed: characterisation and molecular properties for use as functional and nutraceutical ingredients. Trends Food Sci Tech 19:624鈥?33 CrossRef
    6. Foley R, Gao L-L, Spriggs A, Soo L, Goggin D, Smith P, Atkins C, Singh K (2011) Identification and characterisation of seed storage protein transcripts from / Lupinus angustifolius. BMC Plant Biol 11:59 CrossRef
    7. French R, Buirchell B (2005) Lupin: the largest grain legume crop in Western Australia, its adaptation and improvement through plant breeding. Aust J Agric Res 56:1169鈥?180 CrossRef
    8. Galani S, Naz F, Soomro F, Jamil I, Zia-ul-Hassan, Azhar A, Ashraf A (2011) Seed storage protein polymorphism in ten elite rice ( / Oryza sativa L.) genotypes of Sindh. Afr J Biotechnol 10:1106鈥?111
    9. Gladstones JS (1970) Lupins as crop plants. Field Crop Abstr 23:123鈥?48
    10. Hajdera I, Siwinska D, Hasterok R, Maluszynska J (2003) Molecular cytogenetic analysis of genome structure in / Lupinus angustifolius and / Lupinus cosentini. Theor Appl Genet 107:988鈥?96 CrossRef
    11. Higgins T (1984) Synthesis and regulation of major proteins in seeds. Annu Rev Plant Phys 35:191鈥?21 CrossRef
    12. Hortin GL (2006) The MALDI-TOF mass spectrometric view of the plasma proteome and peptidome. Clin Chem 52:1223鈥?237 CrossRef
    13. Islam N, Tsujimoto H, Hirano H (2003) Wheat proteomics: relationship between fine chromosome deletion and protein expression. Proteomics 3:307鈥?16 CrossRef
    14. Islam S, Ma W, Ma J, Buirchell B, Appels R, Yan G (2011a) Diversity of seed protein among the Australian narrow-leafed lupin ( / Lupinus angustifolius L.) cultivars. Crop Pasture Sci 62:765鈥?75 CrossRef
    15. Islam S, Ma W, Yan G, Gao L, Appels R (2011b) Differential recovery of lupin proteins from the gluten matrix in lupin-wheat bread as revealed by mass spectrometry and two-dimensional electrophoresis. J Agric Food Chem 59:6696鈥?704 CrossRef
    16. Jappe U, Vieths S (2010) Lupine, a source of new as well as hidden food allergens. Mol Nutr Food Res 54:113鈥?26 CrossRef
    17. Lampart-Szczapa E (1996) Preparation of protein from lupin seeds. Nahrung/Food 40:71鈥?4 CrossRef
    18. Liu L, Wang AL, Appels R, Ma JH, Xia XC, Lan P, He ZH, Bekes F, Yan YM, Ma WJ (2009) A MALDI-TOF based analysis of high molecular weight glutenin subunits for wheat breeding. J Cereal Sci 50:295鈥?01 CrossRef
    19. Liu L, Ikeda TM, Branlard G, Pena RJ, Rogers WJ, Lerner SE, Kolman MA, Xia XC, Wang LH, Ma WJ (2010) Comparison of low molecular weight glutenin subunits identified by SDS-PAGE, 2-DE, MALDI-TOF-MS and PCR in common wheat. BMC Plant Biol 10:124 CrossRef
    20. Manly KF, Cudmore JRH, Meer JM (2001) Map Manager QTX, cross-platform software for genetic mapping. Mamm Genome 12:930鈥?32 CrossRef
    21. Mastrangelo AM, Marone D, Laido G, De Leonardis AM, De Vita P (2012) Alternative splicing: enhancing ability to cope with stress via transcriptome plasticity. Plant Sci 185鈥?86:40鈥?9 CrossRef
    22. Mooney BP, Thelen JJ (2004) High-throughput peptide mass fingerprinting of soybean seed proteins: automated workflow and utility of UniGene expressed sequence tag databases for protein identification. Phytochemistry 65:1733鈥?744 CrossRef
    23. Naganowska B, Wolko B, Sliwinska E, Kaczmarek Z (2003) Nuclear DNA content variation and species relationships in the genus / Lupinus (Fabaceae). Ann Bot 92:349鈥?55 CrossRef
    24. Nelson MN, Phan HTT, Ellwood SR, Moolhuijzen PM, Hane J, Williams A, O鈥橪one CE, Fosu-Nyarko J, Scobie M, Cakir M (2006) The first gene-based map of / Lupinus angustifolius L.-location of domestication genes and conserved synteny with / Medicago truncatula. Theor Appl Genet 113:225鈥?38 CrossRef
    25. Nelson MN, Moolhuijzen PM, Boersma JG, Chudy M, Lesniewska K, Bellgard M, Oliver RP, 艢wi臋cicki W, Wolko B, Cowling WA (2010) Aligning a new reference genetic map of / Lupinus angustifolius with the genome sequence of the Model Legume, / Lotus japonicus. DNA Res 17:73鈥?3 CrossRef
    26. Payne PI (1987) Genetics of wheat storage proteins and the effect of allelic variation on bread-making quality. Annu Rev Plant Phys 38:141鈥?53 CrossRef
    27. Petry-Podg贸rska I, Z铆dkov谩 J, Flodrov谩 D, Bob谩lov谩 J (2010) 2D-HPLC and MALDI-TOF/TOF analysis of barley proteins glycated during brewing. J Chromatogr B Analyt Technol Biomed Life Sci 878:3143鈥?148 CrossRef
    28. Sharp PA (2005) The discovery of split genes and RNA splicing. Trends Biochem Sci 30:279鈥?81 CrossRef
    29. Shewry PR, Halford NG (2002) Cereal seed storage proteins: structures, properties and role in grain utilization. J Exp Bot 53:947鈥?58 CrossRef
    30. Thompson R, Burstin J, Gallardo K (2009) Post-genomics studies of developmental processes in legume seeds. Plant Physiol 151:1023鈥?029 CrossRef
    31. Vishwanath K, Nethra N, Prasad SR, Dhanraj KN, Gowda R (2007) Identification of rice hybrids and their parental lines based on seed, seedling characters, chemical tests and gel electrophoresis of total soluble seed proteins. Seed Sci Technol 35:176鈥?86
  • 作者单位:Xin Li (1)
    Shahidul Islam (1)
    Huaan Yang (2)
    Wujun Ma (3)
    Guijun Yan (1)

    1. School of Plant Biology, Faculty of Natural and Agricultural Sciences and Institute of Agriculture, The University of Western Australia, 35 Stirling Highway, Crawley, Perth, WA, 6009, Australia
    2. Department of Agriculture and Food Western Australia, 3 Baron-Hay Court, South Perth, WA, 6151, Australia
    3. Molecular Plant Breeding CRC, Centre for Food and Genomic Medicine, State Agriculture Biotechnology Centre, Murdoch University, Western Australian Department of Agriculture and Food, South Street, Perth, WA, 6150, Australia
  • ISSN:1618-0860
文摘
Narrow-leafed lupin (Lupinus angustifolius L.) is a valuable legume crop for animal feed and human health food because of its high proteins content. However, the genetics of seed storage proteins is unclear, limiting further improvement of protein quantity and quality. In this study, matrix-assisted laser desorption/ionization time of flight mass spectrometry was used for the first time to analyze lupin seed storage proteins and the spectra generated was treated as markers to investigate the chromosome locations controlling seed storage proteins in the narrow-leafed lupin. In a recombinant inbred line population of 89 individuals, 48 polymorphic protein peaks were identified and seven of which were successfully mapped onto four existing linkage groups: two on NLL-04, three on NLL-05, one on NLL-07 and one on NLL-14, with LOD values ranging from 2.6 to 7.7 confirming a significant linkage. Most protein-based markers showed distorted segregation and were failed to be integrated into the reference map. Among them, 31 were grouped into six clusters and the other ten were totally unlinked. This study provides a significant clue to study the comparative genomics/proteomics among legumes as well as for protein marker-assisted breeding. The distribution pattern of genes controlling seed storage protein revealed in this study probably exists universally among legumes or even all plants and animals. Whether genes controlling seed storage protein share the same gene expression pattern controlling other enzymes and what is the mechanism behind it are the questions which remain to be answered in the future.

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