In vitro studies on the interaction between human serum albumin and fosfomycin disodium salt, an antibiotic drug by multi-spectroscopic and molecular docking methods
详细信息 查看全文
- 作者：Manjunath D. Meti (1)
Kirthi S. Byadagi (1)
Sharanappa T. Nandibewoor (1)
Shrinivas D. Joshi (2)
Uttam A. More (2)
Shivamurti A. Chimatadar (1) - 关键词：Fosfomycin ; Binding ; Spectroscopic methods ; Circular dichroism ; Fluorescence quenching ; Secondary structure
- 刊名：Molecular Biology Reports
- 出版年：2014
- 出版时间：April 2014
- 年：2014
- 卷：41
- 期：4
- 页码：2377-2387
- 全文大小：3,285 KB
- 参考文献：1. Nandaa RK, Sarkar N, Banerjee R (2007) Probing the interaction of ellagic acid with human serum albumin: a fluorescence spectroscopic study. J Photochem Photobiol A 192:152-58 CrossRef
2. Wu X, Liu J, Wang Q, Xue W, Yao X, Zhang Y, Jin J (2011) Spectroscopic and molecular modeling evidence of clozapine binding to human serum albumin at subdomain IIA. Spectrochim Acta A 79:1202-209 CrossRef
3. Carter DC, Ho JX (1994) Structure of serum albumin. Adv Protein Chem 45:153-03 CrossRef
4. Bian Q, Liu J, Tian J, Hu Z (2004) Binding of genistein to human serum albumin demonstrated using tryptophan fluorescence quenching. Int J Biol Macromol 34:275-79 CrossRef
5. Olson RE (1998) Evolution of ideas about the nutritional value of dietary fat: introduction. J Nutr 128:421S-22S
6. Hendlin D, Stapley EO, Jackson M (1969) Phosphonomycin, a new antibiotic produced by strains of streptomyces. Science 166:122-23 CrossRef
7. Munos JW, Moon SJ, Mansoorabadi SO, Chang W, Hong L, Yan F, Liu A, Liu HW (2008) Purification and characterization of the epoxidase catalyzing the formation of fosfomycin from / Pseudomonas syringae. Biochemistry 47:8726-735 CrossRef
8. Bergogne-Berezin E (2005) Fosfomycin and derivatives. In: Bryskier A (ed) Antimicrobial agents: antibacterials and antifungals. ASM Press, Washington, DC, pp 972-82
9. Tripos International (2012) Sybyl-X 2.0. Tripos International, St. Louis
10. Jain AN (1996) Scoring noncovalent protein–ligand interactions: a continuous differentiable function tuned to compute binding affinities. J Comput Aided Mol Des 10:427-40 CrossRef
11. Jain AN (2003) Surflex: fully automatic flexible molecular docking using a molecular similarity-based search engine. J Med Chem 46:499-11 CrossRef
12. Ai Y, Wang ST, Sun PH, Song FJ (2010) Molecular modeling studies of 4,5-dihydro-1 / Hpyrazolo[4,3- / h]quinazoline derivatives as potent CDK2/cyclin A inhibitors using 3D-QSAR and docking. Int J Mol Sci 11:3705-724 CrossRef
13. Lan P, Chen WN, Chen WM (2011) Molecular modeling studies on imidazo[4,5- / b]pyridine derivatives as Aurora A kinase inhibitors using 3D-QSAR and docking approaches. Eur J Med Chem 46:77-4 CrossRef
14. Lan P, Chen WN, Xiao GK, Sun PH, Chen WM (2010) 3D-QSAR and docking studies on pyrazolo[4,3- / h]quinazoline-3-carboxamides as cyclin-dependent kinase 2 (CDK2) inhibitors. Bioorg Med Chem Lett 20:6764-772 CrossRef
15. Hu YJ, Liu Y, Zhao RM, Qu SS (2005) Interaction of colchicine with human serum albumin investigated by spectroscopic methods. Int J Biol Macromol 37:122-26 CrossRef
16. Sherwin LS (1971) Solute perturbation of protein fluorescence. Quenching of the tryptophyl fluorescence of model compounds and of lysozyme by iodide ion. Biochemistry 10:3254-263 CrossRef
17. Ware WR (1962) Oxygen quenching of fluorescence in solution an experimental study of the diffusion process. J Phys Chem 66:455-58 CrossRef
18. Xiao J, Shi J, Cao H, Wu S, Ren F, Xu M (2007) Analysis of binding interaction between puerarin and bovine serum albumin by multi-spectroscopic method. J Pharm Biomed Anal 45:609-15 CrossRef
19. Shaik SMT, Seetharamappa J, Kandagal PB, Manjunatha DH, Ashoka S (2007) Spectroscopic investigations on the mechanism of interaction of bioactive dye with bovine serum albumin. Dyes Pigments 74:665-71 CrossRef
20. Jin J, Zhang X (2008) Spectrophotometric studies on the interaction between pazufloxacin and human serum albumin or lysozyme. J Lumin 128:81-6 CrossRef
21. Li D, Zhu J, Jin J, Yao X (2007) Studies on the binding of nevadensin to human serum albumin by molecular spectroscopy and modeling. J Mol Struct 846:34-1 CrossRef
22. F?rster T (1959) 10th Spiers Memorial Lecture. Transfer mechanisms of electronic excitation. Discuss Faraday Soc 27:7-7 CrossRef
23. Valeur B, Brochon JC (2001) New trends in fluorescence spectroscopy. Springer, Berlin CrossRef
24. Sklar LA, Hudson BS, Simoni RD (1977) Conjugated polyene fatty acids as fluorescent probes: binding to bovine serum albumin. Biochemistry 16:5100-108 CrossRef
25. Cui FL, Fan J, Ma DL, Liu MC, Chen XG, Hu ZD (2003) A study of the interaction between a new reagent and serum albumin by fluorescence spectroscopy. Anal Lett 36:2151-166 CrossRef
26. Lu Y, Cui F, Fan J, Yang Y, Yao X, Li J (2009) Interaction of human serum albumin with / N-(4-ethoxyphenyl)- / N 0-(4-antipyrinyl) thiourea using spectroscopies and molecular modelling method. J Lumin 129:734-40 CrossRef
27. Ying L, Wenying H, Jiaqin L, Fenling S, Zhide H, Xingguo C (2005) Binding of the bioactive component jatrorrhizine to human serum albumin. Biochim Biophys Acta 1722:15-1 CrossRef
28. Sudlow G, Birkett DJ, Wade DN (1976) Further characterization of specific drug binding sites on human serum albumin. Mol Pharmacol 12:1052-061
29. Zhang G, Zhao N, Wang L (2011) Fluorescence spectrometric studies on the binding of puerarin to human serum albumin using warfarin, ibuprofen and digitoxin as site markers with the aid of chemometrics. J Lumin 131:2716-724 CrossRef
30. Bi SY, Song DQ, Tian Y, Zhou X, Liu ZY, Zhang HQ (2005) Molecular spectroscopic study on the interaction of tetracyclines with serum albumins. Spectrochim Acta A 61:629-36 CrossRef
31. Cheng H, Liu H, Zhang Y, Zou G (2009) Interaction of the docetaxel with human serum albumin using optical spectroscopy methods. J Lumin 129:1196-203 CrossRef
32. He W, Li Y, Liu J, Hu Z, Chen X (2005) Specific interaction of chalcone-protein: cardamonin binding site II on the human serum albumin molecule. Biopolymers 79:48-7 CrossRef
33. Lu ZX, Cui T, Shi QL (1987) Applications of circular dichroism (CD) and optical rotatory dispersion (ORD) in molecular biology. Science Press, Beijing, pp 79-2
34. Shahabadi N, Maghsudi M, Ahmadipour Z (2012) Study on the interaction of silver(I) complex with bovine serum albumin by spectroscopic techniques. Spectrochim Acta A 92:184-88 CrossRef
35. Poulli KI, Chantzos NV, Mousdis G, Georgiou C (2009) Synchronous fluorescence spectroscopy: tool for monitoring thermally stressed edible oils. J Agric Food Chem 57:8194-201 CrossRef
36. Hemmateenejada B, Shamsipurb M, Samaria F, Khayamianc T, Ebrahimic M, Rezaeid Z (2012) Combined fluorescence spectroscopy and molecular modeling studies on the interaction between harmalol and human serum albumin. Pharm Biomed Anal 67-8:201-08 CrossRef
37. Cheng Z (2012) Studies on the interaction between scopoletin and two serum albumins by spectroscopic methods. J Lumin 132:2719-729 CrossRef
38. Jiang H, Chen RR, Wang HC, Pu HL (2012) Studies on the binding of vinpocetine to human serum albumin by molecular spectroscopy and modeling. Chin Chem Lett 23:599-02 CrossRef
39. Li Y, Yang G, Mei Z (2012) Spectroscopic and dynamic light scattering studies of the interaction between pterodontic acid and bovine serum albumin. Acta Pharma Sin B 2:53-9 CrossRef
40. Yuea Y, Liua J, Fana J, Yaob X (2011) Binding studies of phloridzin with human serum albumin and its effect on the conformation of protein. J Pharm Biomed Anal 56:336-42 CrossRef
41. Lakowicz JR (1999) Principles of fluorescence spectroscopy, 2nd edn. Plenum Press, New York, pp 243-44 CrossRef - 作者单位：Manjunath D. Meti (1)
Kirthi S. Byadagi (1)
Sharanappa T. Nandibewoor (1)
Shrinivas D. Joshi (2)
Uttam A. More (2)
Shivamurti A. Chimatadar (1)
1. P. G. Department of Studies in Chemistry, Karnatak University, Pavate Nagar, Dharwad, 580003, India
2. Novel Drug Design and Discovery Laboratory, Department of Pharmaceutical Chemistry, S.E.T’s College of Pharmacy, Sangolli Rayanna Nagar, Dharwad, 580002, Karnataka, India - ISSN：1573-4978
文摘
The interaction between the human serum albumin (HSA) and drug, fosfomycin disodium salt (FOS) has been studied by different spectroscopic techniques. The experimental results showed a static quenching mechanism in the interaction of FOS with HSA. The number of binding sites, n and observed binding constant K a were measured by fluorescence quenching method. The thermodynamic parameters ΔG°, ΔH° and ΔS° were calculated according to van’t Hoff equation. The calculated distance r between FOS and the protein is evaluated according to the theory of F?rster energy transfer. A change in the secondary structure of the protein was evident from the circular dichroism measurements, synchronous fluorescence and three-dimensional fluorescence spectra.