Mapping QTL for the traits associated with heat tolerance in wheat (Triticum aestivum L.)

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• 作者：Shyamal Krishna Talukder (1) (3)
  Md Ali Babar (2)
  Kolluru Vijayalakshmi (3)
  Jesse Poland (4)
  Pagadala Venkata Vara Prasad (3)
  Robert Bowden (5)
  Allan Fritz (3)
  
  1. Forage Improvement Division ; The Samuel Roberts Noble Foundation ; Ardmore ; OK ; 73401 ; USA
  3. Department of Agronomy ; Kansas State University ; Manhattan ; KS ; 66506 ; USA
  2. Department of Agronomy ; University of Florida ; Gainesville ; Florida ; USA
  4. Department of Plant Pathology ; Kansas State University ; Manhattan ; KS ; 66506 ; USA
  5. USDA/ARS/Hard Winter Wheat Genetics Research Unit ; Kansas State University ; Manhattan ; KS ; 66506 ; USA
  
• 关键词：Wheat ; Heat tolerance ; GBS ; SNP ; Thylakoid membrane damage ; Plasmamembrane damage
• 刊名：BMC Genetics
• 出版年：2014
• 出版时间：December 2014
• 年：2014
• 卷：15
• 期：1
• 全文大小：1,932 KB
• 参考文献：1. Reynolds, M, Balota, M, Delgado, M, Amani, I, Fischer, R (1994) Physiological and morphological traits associated with spring wheat yield under hot, irrigated conditions. Funct Plant Biol 21: pp. 717-730
  2. Wardlaw, I, Wrigley, C (1994) Heat tolerance in temperate cereals: an overview. Funct Plant Biol 21: pp. 695-703
  3. Hays, DB, Do, JH, Mason, RE, Morgan, G, Finlayson, SA (2007) Heat stress induced ethylene production in developing wheat grains induces kernel abortion and increased maturation in a susceptible cultivar. Plant Sci 172: pp. 1113-1123 CrossRef
  4. Fokar, M, Blum, A, Nguyen, HT (1998) Heat tolerance in spring wheat. II. Grain filling. Euphytica 104: pp. 9-15 CrossRef
  5. Wardlaw, IF, Blumenthal, C, Larroque, O, Wrigley, CW (2002) Contrasting effects of chronic heat stress and heat shock on kernel weight and flour quality in wheat. Funct Plant Biol 29: pp. 25-34 CrossRef
  6. Wardlaw, I, Dawson, I, Munibi, P (1989) The tolerance of wheat to hight temperatures during reproductive growth. 2. Grain development. Crop Pasture Sci 40: pp. 15-24 CrossRef
  7. Paulsen, GM High temperature responses of crop plants. In: Boote, KJ, Bennett, JM, Sinclair, TR, Paulsen, GM eds. (1994) Physiology and Determination of Crop Yield. ASA, CSSA and SSSA, Madison, WI, pp. 365-389
  8. Mason, RE, Mondal, S, Beecher, FW, Hays, DB (2011) Genetic loci linking improved heat tolerance in wheat (Triticum aestivum L.) to lower leaf and spike temperatures under controlled conditions. Euphytica 180: pp. 181-194 CrossRef
  9. Fokar, M, Nguyen, HT, Blum, A (1998) Heat tolerance in spring wheat. I. Estimating cellular thermotolerance and its heritability. Euphytica 104: pp. 1-8 CrossRef
  10. Larkindale, J, Hall, JD, Knight, MR, Vierling, E (2005) Heat stress phenotypes of Arabidopsis mutants implicate multiple signaling pathways in the acquisition of thermotolerance. Plant Physiol 138: pp. 882-897 CrossRef
  11. Wahid, A, Gelani, S, Ashraf, M, Foolad, M (2007) Heat tolerance in plants: an overview. Environ Exp Bot 61: pp. 199-223 CrossRef
  12. Moffatt, J, Sears, R, Paulsen, G (1990) Wheat high temperature tolerance during reproductive growth. I. Evaluation by chlorophyll fluorescence. Crop Sci 30: pp. 881-885 CrossRef
  13. Araus, J, Amaro, T, Voltas, J, Nakkoul, H, Nachit, M (1998) Chlorophyll fluorescence as a selection criterion for grain yield in durum wheat under Mediterranean conditions. Field Crops Res 55: pp. 209-223 CrossRef
  14. Blum, A, Klueva, N, Nguyen, H (2001) Wheat cellular thermotolerance is related to yield under heat stress. Euphytica 117: pp. 117-123 CrossRef
  15. Marcum, KB (1998) Cell membrane thermostability and whole-plant heat tolerance of Kentucky bluegrass. Crop Sci 38: pp. 1214-1218 CrossRef
  16. Wahid, A, Shabbir, A (2005) Induction of heat stress tolerance in barley seedlings by pre-sowing seed treatment with glycinebetaine. Plant Growth Regul 46: pp. 133-141 CrossRef
  17. Marsh, L, Davis, D, Li, P (1985) Selection and inheritance of heat tolerance in the common bean by use of conductivity. J Am Soc Hort Sci 110: pp. 680-683
  18. Ottaviano, E, Gorla, MS, Pe, E, Frova, C (1991) Molecular markers (RFLPs and HSPs) for the genetic dissection of thermotolerance in maize. Theor Appl Genet 81: pp. 713-719 CrossRef
  19. Yang, J, Sears, R, Gill, B, Paulsen, G (2002) Growth and senescence characteristics associated with tolerance of wheat-alien amphiploids to high temperature under controlled conditions. Euphytica 126: pp. 185-193 CrossRef
  20. Butler, JM (2002) Quantitative trait locus evaluation for agronomic and morphological traits in a spring wheat population. Master鈥檚 thesis. Colorado State University, Fort Collins
  21. Mason, RE, Mondal, S, Beecher, FW, Pacheco, A, Jampala, B, Ibrahim, AM, Hays, DB (2010) QTL associated with heat susceptibility index in wheat (Triticum aestivum L.) under short-term reproductive stage heat stress. Euphytica 174: pp. 423-436 CrossRef
  22. Paliwal, R, R枚der, MS, Kumar, U, Srivastava, J, Joshi, AK (2012) QTL mapping of terminal heat tolerance in hexaploid wheat (T. aestivum L.). Theor Appl Genet 125: pp. 561-575 CrossRef
  23. Vijayalakshmi, K, Fritz, AK, Paulsen, GM, Bai, G, Pandravada, S, Gill, BS (2010) Modeling and mapping QTL for senescence-related traits in winter wheat under high temperature. Mol Breed 26: pp. 163-175 CrossRef
  24. Elshire RJ, Glaubitz JC, Sun Q, Poland JA, Kawamoto K, Buckler ES, Mitchell SE: A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species. / Plos One 2011, 6(5).
  25. Poland JA, Brown PJ, Sorrells ME, Jannink J-L: Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach. / Plos One 2012, 7(2).
  26. Sears, R, Moffatt, J, Martin, T, Cox, T, Bequette, R, Curran, S, Chung, O, Heer, W, Long, J, Witt, M (1997) Registration of 鈥楯agger鈥檞heat. Crop Sci 37: pp. 1010 CrossRef
  27. Alkhatib, K, Paulsen, GM (1990) Photosynthesis and productivity during high-temperature stress of wheat genotypes from major world regions. Crop Sci 30: pp. 1127-1132 CrossRef
  28. Yang, J, Sears, RG, Gill, BS, Paulsen, GM (2002) Quantitative and molecular characterization of heat tolerance in hexaploid wheat. Euphytica 126: pp. 275-282 CrossRef
  29. Kadir, S, Weihe, M, Al-Khatib, K (2007) Photochemical efficiency and recovery of photosystem II in grapes after exposure to sudden and gradual heat stress. J Am Soc Hort Sci 132: pp. 764-769
  30. Ristic, Z, Bukovnik, U, Prasad, PV (2007) Correlation between heat stability of thylakoid membranes and loss of chlorophyll in winter wheat under heat stress. Crop Sci 47: pp. 2067-2073 CrossRef
  31. Ristic, Z, Cass, DD (1993) Dehydration avoidance and damage to the plasma and thylakoid membranes in lines of maize differing in endogenous levels of abscisic acid. J Plant Physiol 142: pp. 759-764 CrossRef
  32. R Core Team: R: A Language and Environment for Statistical Computing (R Foundation for Statistical Computing, Vienna, Austria). 2012. Available at www.R-project.org/.
  33. Vijayalakshmi K: / Physiological and genetic analyses of post-anthesis heat tolerance in winter wheat (Triticum aestivum L.). PhD thesis. Kansas State University, Department of Agronomy; 2007. available at http://hdl.handle.net/2097/300.
  34. Ooijen, J (2006) JoinMap 4. Software for the calculation of genetic linkage maps in experimental populations Kyazma BV, Wageningen, Netherlands.
  35. Kosambi, D (1943) The estimation of map distances from recombination values. Ann Eugen 12: pp. 172-175 CrossRef
  36. Wang, S, Basten, C, Zeng, Z (2007) Windows QTL cartographer 2.5. Department of Statistics, North Carolina State University, Raleigh, NC
  37. Pinto, RS, Reynolds, MP, Mathews, KL, McIntyre, CL, Olivares-Villegas, J-J, Chapman, SC (2010) Heat and drought adaptive QTL in a wheat population designed to minimize confounding agronomic effects. Theor Appl Genet 121: pp. 1001-1021 CrossRef
  38. Li, H, Ribaut, J-M, Li, Z, Wang, J (2008) Inclusive composite interval mapping (ICIM) for digenic epistasis of quantitative traits in biparental populations. Theor Appl Genet 116: pp. 243-260 CrossRef
  39. Saadalla, M, Quick, J, Shanahan, J (1990) Heat tolerance in winter wheat: II. Membrane thermostability and field performance. Crop Sci 30: pp. 1248-1251 CrossRef
  40. Sourdille, P, Cadalen, T, Guyomarc鈥檋, H, Snape, J, Perretant, M, Charmet, G, Boeuf, C, Bernard, S, Bernard, M (2003) An update of the Courtot鈥壝椻€塁hinese Spring intervarietal molecular marker linkage map for the QTL detection of agronomic traits in wheat. Theor Appl Genet 106: pp. 530-538
  41. Malatrasi, M, Close, TJ, Marmiroli, N (2002) Identification and mapping of a putative stress response regulator gene in barley. Plant Mol Biol 50: pp. 141-150 CrossRef
  42. Yang, L, Ji, W, Zhu, Y, Gao, P, Li, Y, Cai, H, Bai, X, Guo, D (2010) GsCBRLK, a calcium/calmodulin-binding receptor-like kinase, is a positive regulator of plant tolerance to salt and ABA stress. J Exp Bot 61: pp. 2519-2533 CrossRef
  43. Jain, M, Tyagi, AK, Khurana, JP (2006) Overexpression of putative topoisomerase 6 genes from rice confers stress tolerance in transgenic Arabidopsis plants. FEBS J 273: pp. 5245-5260 CrossRef
  44. Christou, A, Filippou, P, Manganaris, GA, Fotopoulos, V (2014) Sodium hydrosulfide induces systemic thermotolerance to strawberry plants through transcriptional regulation of heat shock proteins and aquaporin. BMC Plant Biol 14: pp. 42 CrossRef
  45. Iglesias-Acosta, M, Mart铆nez-Ballesta, MC, Teruel, JA, Carvajal, M (2010) The response of broccoli plants to high temperature and possible role of root aquaporins. Environ Exp Bot 68: pp. 83-90 CrossRef
  46. Li, Y, Middaugh, CR, Fang, J (2010) A novel scoring function for discriminating hyperthermophilic and mesophilic proteins with application to predicting relative thermostability of protein mutants. Bmc Bioinformatics 11: pp. 62 CrossRef
  47. Forrest, KL, Bhave, M (2010) Physical mapping of wheat aquaporin genes. Theor Appl Genet 120: pp. 863-873 CrossRef
  
• 刊物主题：Life Sciences, general; Animal Genetics and Genomics; Microbial Genetics and Genomics; Plant Genetics & Genomics; Genetics and Population Dynamics;
• 出版者：BioMed Central
• ISSN：1471-2156

文摘

Background High temperature (heat) stress during grain filling is a major problem in most of the wheat growing areas. Developing heat tolerant cultivars has become a principal breeding goal in the Southern and Central Great Plain areas of the USA. Traits associated with high temperature tolerance can be used to develop heat tolerant cultivars in wheat. The present study was conducted to identify chromosomal regions associated with thylakoid membrane damage (TMD), plasmamembrane damage (PMD), and SPAD chlorophyll content (SCC), which are indicative of high temperature tolerance. Results In this study we have reported one of the first linkage maps in wheat using genotype by sequencing SNP (GBS-SNP) markers to extreme response to post anthesis heat stress conditions. The linkage map was comprised of 972 molecular markers (538 Bin, 258 AFLPs, 175 SSRs, and an EST). The genotypes of the RIL population showed strong variation for TMD, SCC and PMD in both generations (F10 and F9). Composite interval mapping identified five QTL regions significantly associated with response to heat stress. Associations were identified for PMD on chromosomes 7A, 2B and 1D, SCC on 6A, 7A, 1B and 1D and TMD on 6A, 7A and 1D. The variability (R2) explained by these QTL ranged from 11.9 to 30.6% for TMD, 11.4 to 30.8% for SCC, and 10.5 to 33.5% for PMD. Molecular markers Xbarc113 and AFLP AGCTCG-347 on chromosome 6A, Xbarc121 and Xbarc49 on 7A, gwm18 and Bin1130 on 1B, Bin178 and Bin81 on 2B and Bin747 and Bin1546 on 1D were associated with these QTL. Conclusion The identified QTL can be used for marker assisted selection in breeding wheat for improved heat tolerance in Ventnor or Karl 92 genetic background.