Improved mass accuracy for higher mass peptides by using SWIFT excitation for MALDI-FTICR mass spectrometry
详细信息 查看全文
- 作者：Li Jing (1)
Chunyan Li (1)
Richard L. Wong (2)
Desmond A. Kaplan (3)
I. Jonathan Amster (1) - 刊名：Journal of The American Society for Mass Spectrometry
- 出版年：2008
- 出版时间：January 2008
- 年：2008
- 卷：19
- 期：1
- 页码：76-81
- 全文大小：170KB
- 参考文献：1. Gross, M. L. Accurate Masses for Structure Confirmation. / J. Am. Soc. Mass Spectrom. 1994, / 5, 57鈥?7. CrossRef
2. Conrads, T. P.; Anderson, G. A.; Veenstra, T. D.; Pasa-Tolic, L.; Smith, R. D. Utility of Accurate Mass Tags for Proteome-Wide Protein Identification. / Anal. Chem. 2000, / 72, 3349鈥?354. CrossRef
3. Williams, J. D.; Flanagan, M.; Lopez, L.; Fischer, S.; Miller, L. A. D. Using Accurate Mass Electrospray Ionization Time-of-Flight Mass Spectrometry with In-Source Collision-Induced Dissociation to Sequence Peptide Mixtures. / J. Chromatogr. A. 2003, / 1020, 11鈥?6. CrossRef
4. Wyatt, M. F.; Stein, B. K.; Brenton, A. G. Investigation into Accurate Mass Capability of Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry, with Respect to Radical Ion Species. / J. Am. Soc. Mass Spectrom. 2006, / 17, 672鈥?75. CrossRef
5. Yates, J. R.; Cociorva, D.; Liao, L.; Zabrouskov, V. Performance of a Mass Analyzer with Orbital Trapping for Peptide Analysis. / Anal. Chem. 2006, / 78, 493鈥?00. CrossRef
6. Makarov, A.; Denisov, E.; Kholomeev, A.; Balschun, W.; Lange, O.; Strupat, K.; Horning, S. Performance Evaluation of a Hybrid Linear Ion Trap/Orbitrap Mass Spectrometer. / Anal. Chem. 2006, / 78, 2113鈥?120. CrossRef
7. Comisarow, M. B.; Marshall, A. G. Fourier Transform Ion Cyclotron Resonance Spectroscopy. / Chem. Phys. Lett. 1974, / 25, 282鈥?83. CrossRef
8. Comisarow, M. B.; Marshall, A. G. Frequency-Sweep Fourier Transform Ion Cyclotron Resonance Spectroscopy. / Chem. Phys. Lett. 1974, / 26, 489鈥?90. CrossRef
9. Gorshkov, M. V.; Guan, S.; Marshall, A. G. Masses of Stable Neon Isotopes Determined at Parts per Billion Precision by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. / Int. J. Mass Spectrom. Ion Processes. 1993, / 128, 47鈥?0. CrossRef
10. Rodgers, R. P.; White, F. M.; Hendrickson, C. L.; Marshall, A. G.; Andersen, K. V. Resolution, Elemental Composition, and Simultaneous Monitoring by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry of Organosulfur Species Before and After Diesel Fuel Processing. / Anal. Chem. 1998, / 70, 4743鈥?750. CrossRef
11. He, F.; Hendrickson, C. L.; Marshall, A. G. Baseline Mass Resolution of Peptide Isobars: A Record for Molecular Mass Resolution. / Anal. Chem. 2001, / 73, 647鈥?50. CrossRef
12. Smith, R. D.; Anderson, G. A.; Lipton, M. S.; Pasa-Tolic, L.; Shen, Y.; Conrads, T. P.; Veenstra, T. D.; Udseth, H. R. An Accurate Mass Tag Strategy for Quantitative and High-Throughput Proteome Measurements. / Proteomics. 2002, / 2, 513鈥?23. CrossRef
13. Burton, R. D.; Matuszak, K. P.; Watson, C. H.; Eyler, J. R. Exact Mass Measurements Using a 7 Tesla Fourier Transform Ion Cyclotron Resonance Mass Spectrometer in a Good Laboratory Practices-Regulated Environment. / J. Am. Soc. Mass Spectrom. 1999, / 10, 1291鈥?297. CrossRef
14. Williams, D. K.; Muddiman, D. C. Parts-per-Billion Mass Measurement Accuracy Achieved Through the Combination of Multiple Linear Regression and Automatic Gain Control in a Fourier Transform Ion Cyclotron Resonance Mass Spectrometer. / Anal. Chem. 2007, / 79, 5058鈥?063. CrossRef
15. Easterling, M. L.; Mize, T. H.; Amster, I. J. Routine Part-per-Million Mass Accuracy for High-Mass Ions: Space-Charge Effects in MALDI FT-ICR. / Anal. Chem. 1999, / 71, 624鈥?32. CrossRef
16. Muddiman, D. C.; Oberg, A. L. Statistical Evaluation of Internal and External Mass Calibration Laws Utilized in Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. / Anal. Chem. 2005, / 77, 2406鈥?414. CrossRef
17. Liu, T.; Belov, M. E.; Jaitly, N.; Qian, W. J.; Smith, R. D. Accurate Mass Measurements in Proteomics. / Chem. Rev. 2007, / 107, 3621鈥?653. CrossRef
18. Zhang, L. K.; Rempel, D.; Pramanik, B. N.; Gross, M. L. Accurate Mass Measurements by Fourier Transform Mass Spectrometry. / Mass Spectrom. Rev. 2005, / 24, 286鈥?09. CrossRef
19. Francl, T. J.; Sherman, M. G.; Hunter, R. L.; Locke, M. J.; Bowers, W. D.; McIver, R. T. Experimental Determination of the Effects of Space Charge on Ion Cyclotron Resonance Frequencies. / Int. J. Mass Spectrom. Ion Processes. 1983, / 54, 189鈥?99. CrossRef
20. Ledford, E. B.; Rempel, D. L.; Gross, M. L. Space-Charge Effects in Fourier-Transform Mass-Spectrometry-Mass Calibration. / Anal. Chem. 1984, / 56, 2744鈥?748. CrossRef
21. Hannis, J. C.; Muddiman, D. C. A Dual Electrospray Ionization Source Combined with Hexapole Accumulation to Achieve High Mass Accuracy of Biopolymers in Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. / J. Am. Soc. Mass Spectrom. 2000, / 11, 876鈥?83. CrossRef
22. O鈥機onnor, P. B.; Costello, C. E. Internal Calibration on Adjacent Samples (InCAS) with Fourier Transform Mass Spectrometry. / Anal. Chem. 2000, / 72, 5881鈥?885. CrossRef
23. Mize, T. H.; Amster, I. J. Broad-Band Ion Accumulation with an Internal Source MALDI-FTICR-MS. / Anal. Chem. 2000, / 72, 5886鈥?891. CrossRef
24. Masselon, C.; Tolmachev, A. V.; Anderson, G. A.; Harkewicz, R.; Smith, R. D. Mass Measurement Errors Caused by 鈥淟ocal鈥?Frequency Perturbations in FTICR Mass Spectrometry. / J. Am. Soc. Mass Spectrom. 2002, / 13, 99鈥?06. CrossRef
25. Syka, J. E. P.; Marto, J. A.; Bai, D. L.; Horning, S.; Senko, M. W.; Schwartz, J. C.; Ueberheide, B.; Garcia, B.; Busby, S.; Muratore, T.; Shabanowitz, J.; Hunt, D. F. Novel Linear Quadrupole Ion Trap/FT Mass Spectrometer: Performance Characterization and Use in the Comparative Analysis of Histone H3 Post-translational Modifications. / J. Proteome Res. 2004, / 3, 621鈥?26. CrossRef
26. Wong, R. L.; Amster, I. J. Sub Part-per-Million Mass Accuracy by Using Stepwise-External Calibration in Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. / J. Am. Soc. Mass Spectrom. 2006, / 17, 1681鈥?691. CrossRef
27. Wong, R. L.; Amster, I. J. Combining Low and High Mass Ion Accumulation for Enhancing Shotgun Proteome Analysis by Accurate Mass Measurement. / J. Am. Soc. Mass Spectrom. 2006, / 17, 205鈥?12. CrossRef
28. Marshall, A. G.; Wang, T. C. L.; Ricca, T. L. Tailored Excitation for Fourier Transform Ion Cyclotron Mass Spectrometry. / J. Am. Chem. Soc. 1985, / 107, 7893鈥?897. CrossRef
29. Guan, S.; Marshall, A. G. Stored Waveform Inverse Fourier Transform (SWIFT) Ion Excitation in Trapped-Ion Mass Spectrometry: Theory and Applications. / Int. J. Mass Spectrom. Ion Processes. 1996, / 157/158, 5鈥?7. CrossRef
30. Guan, S. General Phase Modulation Method for Stored Waveform Inverse Fourier Transform Excitation for Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. / J. Chem. Phys. 1989, / 91, 775鈥?77. CrossRef
31. Marshall, A. G.; Guan, S. Advantages of High Magnetic Field for Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. / Rapid Commun. Mass Spectrom. 1996, / 10, 1819鈥?823. CrossRef - 作者单位：Li Jing (1)
Chunyan Li (1)
Richard L. Wong (2)
Desmond A. Kaplan (3)
I. Jonathan Amster (1)
1. Department of Chemistry, University of Georgia, 30602, Athens, Georgia, USA
2. Bristol-Myers Squibb, Hopewell, New Jersey, USA
3. Bruker Daltonics, Billerica, Massachusetts, USA
文摘
Stepwise-external calibration has previously been shown to produce sub part-per-million (ppm) mass accuracy for the MALDI-FTICR/MS analyses of peptides up to m/z 2500. The present work extends these results to ions up to m/z 4000. Mass measurement errors for ions of higher mass-to-charge are larger than for ions below m/z 2500 when using conventional chirp excitation to detect ions. Mass accuracy obtained by using stored waveform inverse Fourier transform (SWIFT) excitation was evaluated and compared with chirp excitation. Analysis of measurement errors reveals that SWIFT excitation provides smaller deviations from the calibration equation and better mass accuracy than chirp excitation for a wide mass range and for widely varying ion populations.