Breed-specific transcriptome response of spleen from six to eight week old piglet after infection with Streptococcus suis type 2

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• 作者：U. Gaur (1) (2)
  YY. Xiong (3)
  QP. Luo (1) (2)
  FY. Yuan (1) (2)
  HY. Wu (1) (2)
  M. Qiao (1) (2)
  K. Wimmers (4)
  K. Li (5)
  SQ. Mei (1) (2)
  GS. Liu (1) (2)
  
  1. Institute of Animal Science and Veterinary Medicine ; Hubei Academy of Agricultural Sciences ; Yaoyuan No. 1 ; Nanhu ; Hongshan District ; Wuhan ; 430064 ; China
  2. Hubei Key Laboratory of Animal Embryo Engineering and Molecular Breeding ; Yaoyuan No. 1 ; Nanhu ; Hongshan District ; Wuhan ; 430064 ; China
  3. State Key Laboratory for Biocontrol ; Sun Yat-Sen University ; Guangzhou ; 510275 ; China
  4. Research Unit 鈥楳olecular Biology鈥? Leibniz Institute for Farm Animals Biology (FBN) ; Wilhelm-Stahl-Allee 2 ; 18196 ; Dummerstorf ; Germany
  5. Beijing Institute of Animal Science and Veterinary Medicine ; Chinese Academy of Agricultural Sciences ; Malianwa ; Haidian District ; Beijing ; 100193 ; China
  
• 关键词：Pigs ; Molecular immunology ; RNA ; seq ; Streptococcus suis type 2 ; Susceptibility
• 刊名：Molecular Biology Reports
• 出版年：2014
• 出版时间：December 2014
• 年：2014
• 卷：41
• 期：12
• 页码：7865-7873
• 全文大小：269 KB
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• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Life Sciences
  Animal Anatomy, Morphology and Histology
  Animal Biochemistry
  
• 出版者：Springer Netherlands
• ISSN：1573-4978

文摘

Different pig breeds have shown differential susceptibility to the pathogen infection; however, molecular mechanisms of the infection susceptibility are not fully understood. Streptococcus suis type 2 (SS2) is an important zoonotic pathogen. To identify the genes responsible for infection susceptibility, pigs from two different breeds (Enshi black and Landrace) were inoculated with SS2 and their spleen transcriptome profiles were investigated in the present study. The differentially expressed genes (DEGs) were analyzed from infected versus control pigs in each breed, and then compared between both pig breeds. Enshi black pig showed more DEGs than Landrace (830 vs. 611) and most of these were due to down-regulated genes (543 vs. 387). However some DEGs were uniquely expressed in one breed, some were expressed in opposite direction in both breeds. A number of candidate genes and pathways are identified which might be involved in susceptibility to SS2, for example, MMP9 and Resistin were only significantly expressed in Landrace. NPG3 and PMAP23 were up-regulated in Landrace whereas down-regulated in Enshi black. LENG8 in control Landrace have inherently higher expression than control Enshi black. IGKV6 is down-regulated in Landrace but up-regulated in Enshi black. Overall, the transcriptome profiles are consistent with the clinical signs, i.e. the Enshi black is more susceptible to SS2 infection than Landrace. This is the first study to identify differential gene expression between indigenous and modern commercial pigs after in vivo SS2 infection using RNA-seq. The significant DEGs in splenic profiles between two pig breeds suggested considerable involvement of genetic background in susceptibility to the SS2 infection in pigs.