The Bxb1 recombination system demonstrates heritable transmission of site-specific excision in Arabidopsis
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  • 作者:James G Thomson (1)
    Ronald Chan (1)
    Jamison Smith (1)
    Roger Thilmony (1)
    Yuan-Yeu Yau (2)
    YueJu Wang (2)
    David W Ow (2)
  • 刊名:BMC Biotechnology
  • 出版年:2012
  • 出版时间:December 2012
  • 年:2012
  • 卷:12
  • 期:1
  • 全文大小:922KB
  • 参考文献:1. James C: / Global Status of Commercialized Biotech/GM Crops. 41st edition. ISAAA, Ithaca, NY: ISAAA Brief; 2009.
    2. James C: Global Status of Commercialized Biotech/GM Crops. [http://www.isaaa.org/resources/publications/briefs/35] / ISAAA Briefs no. 35 Ithaca, New York, USA: International Service for Acquisition on Agri-Biotech Applications (ISAAA); 2006.
    3. Ramessar K, Capell T, Twyman RM, Quemada H, Christou P: Calling the tunes on transgenic crops: the case for regulatory harmony. / Mol Breeding 2009, 23:99鈥?12. CrossRef
    4. Wang Y, Yau YY, Perkins-Balding D, Thomson JG: Recombinase technology: applications and possibilities. / Plant Cell Rep 2011,30(3):267鈥?85. CrossRef
    5. Thomson JG, Ow DW: Site-specific recombination systems for the genetic manipulation of eukaryotic genomes. / Genesis 2006, 44:465鈥?76. CrossRef
    6. Thomson JG, Chan R, Thilmony R, Yau Y-Y, Ow DW: PhiC31 recombination system demonstrates heritable germinal transmission of site-specific excision from the Arabidopsis genome. / BMC Biotech 2010, 10:17. doi:10.1186/1472鈥?750鈥?0鈥?7 CrossRef
    7. Yau YY, Wang Y, Thomson JG, Ow DW: Method for Bxb1-mediated site-specific integration in planta. / Methods Mol Biol 2011, 701:147鈥?66. CrossRef
    8. Thomason LC, Calendar R, Ow DW: Gene insertion and replacement in Schizosaccharomyces pombe mediated by the Streptomyces bacteriophage C31 site-specific recombination system. / Mol Genet Genomics 2001, 265:1031鈥?038. CrossRef
    9. Ghosh P, Bibb LA, Hatfull GF: Two-step site selection for serine-integrase-mediated excision: DNA-directed integrase conformation and central dinucleotide proofreading. / Proc Natl Acad Sci USA 2008,105(9):3238鈥?243. CrossRef
    10. Kim AI, Ghosh P, Aaron MA, Bibb LA, Jain S, Hatfull GF: Mycobacteriophage Bxb1 integrates into the Mycobacterium smegmatis groEL1 gene. / Mol Microbiol 2003,50(2):463鈥?73. CrossRef
    11. Keravala A, Groth AC, Jarrahian S, Thyagarajan B, Hoyt JJ, Kirby PJ, Calos MP: A diversity of serine phage integrases mediate site-specific recombination in mammalian cells. / Mol Genet Genomics 2006,276(2):135鈥?46. CrossRef
    12. Russell JP, Chang DW, Tretiakova A, Padidam M: Phage Bxb1 integrase mediates highly efficient. / Biotechniques 2006, 40:460鈥?64. CrossRef
    13. Huang J, Ghosh P, Hatfull GF, Hong Y: Successive and targeted DNA integrations in the Drosophila genome by Bxb1 and phiC31 integrases. / Genetics 2011,189(1):391鈥?95. CrossRef
    14. Dale EC, Ow DW: Gene transfer with subsequent removal of the selection gene from the host genome. / Proc Natl Acad Sci USA 1991, 88:10558鈥?0562. CrossRef
    15. Thomson JG, Yau YY, Blanvillain R, Chiniquy D, Thilmony R, Ow DW: ParA resolvase catalyzes site-specific excision of DNA from the Arabidopsis genome. / Transgenic Res 2009,18(2):237鈥?48. CrossRef
    16. Blanvillain R, Kim JH, Lima A, Ow DW: OXIDATIVE STRESS 3 is a chromatin-associated factor involved in tolerance to heavy metals and oxidative stress. / Plant J 2009,57(4):654鈥?65. CrossRef
    17. Factsheet-Sustainability Online: Sustainability. [http://www.bio.org] / Biotechnology Industry Organization 2006. [Online http://bio.org/ind/epa/BIO_Factsheets_Sustainability_v2.pdf]
    18. Cellini F, Chesson A, Colquhoun I, Constable A, Davies HV, Engel KH, Gatehouse AM, Karenlampi S, Kok EJ, Leguay JJ, Lehesranta S, Noteborn HP, Pedersen J, Smith M: Unintended effects and their detection in genetically modified crops. / Food Chem Toxicol 2004, 42:1089鈥?125. CrossRef
    19. Chawla R, Ariza-Nieto M, Wilson AJ, Moore SK, Srivastava V: Transgene expression produced by biolistic-mediated, site-specific gene integration is consistently inherited by the subsequent generations. / Plant Biotechnol J 2006, 4:209鈥?18. CrossRef
    20. Albert H, Dale EC, Lee E, Ow DW: Site-specific integration of DNA into wild-type and mutant lox sites placed in the plant genome. / Plant J 1995, 7:649鈥?59. CrossRef
    21. Choi S, Begum D, Koshinsky H, Ow DW, Wing RA: A new approach for the identification and cloning of genes: the pBACwich system using Cre/lox site-specific recombination. / Nucleic Acids Res 2000, 28:E19. CrossRef
    22. Day CD, Lee E, Kobayashi J, Holappa LD, Albert H, Ow DW: Transgene integration into the same chromosome location can produce alleles that express at a predictable level, or alleles that are differentially silenced. / Genes Dev 2000, 14:2869鈥?880. CrossRef
    23. Nanto K, Yamada-Watanabe K, Ebinuma H: Agrobacterium -mediated RMCE approach for gene replacement. / Plant Biotechnol J 2005, 3:203鈥?14. CrossRef
    24. Nanto K, Ebinuma H: Marker-free site-specific integration plants. / Transgenic Res 2008, 17:337鈥?44. CrossRef
    25. Srivastava V, Ow DW: Biolistic mediated site-specific integration in rice. / Molecular Breeding 2002, 8:345鈥?50. CrossRef
    26. Srivastava V, Ariza-Nieto M, Wilson AJ: Cre-mediated site-specific gene integration for consistent transgene expression in rice. / Plant Biotech J 2004, 2:169鈥?79. CrossRef
    27. Vergunst AC, Hooykaas PJ: Cre/lox-mediated site-specific integration of Agrobacterium T-DNA in Arabidopsis thaliana by transient expression of cre. / Plant Mol Biol 1998, 38:393鈥?06. CrossRef
    28. Vergunst AC, Jansen LE, Hooykaas PJ: Site-specific integration of Agrobacterium T-DNA in Arabidopsis thaliana mediated by Cre recombinase. / Nucleic Acids Res 1998, 26:2729鈥?734. CrossRef
    29. Ow DW: Recombinase-directed plant transformation for the post-genomic era. / Plant Mol Biol 2002, 48:183鈥?00. CrossRef
    30. Clough SJ, Bent AF: Floral dip: a simplified method for Agrobacterium -mediated transformation of Arabidopsis thaliana . / Plant J 1998, 16:735鈥?43. CrossRef
    31. Sambrook J, Russell DW: Southern Blot Hybridization. In / Molecular Cloning A Laboratory Manual. 3rd edition. Edited by: Argentine J. NewYork: Cold Spring Harbor Press; 2001:6.33鈥?.46.
  • 作者单位:James G Thomson (1)
    Ronald Chan (1)
    Jamison Smith (1)
    Roger Thilmony (1)
    Yuan-Yeu Yau (2)
    YueJu Wang (2)
    David W Ow (2)

    1. Crop Improvement and Utilization Research Unit, Western Regional Research Center, USDA-ARS, 800 Buchanan Street, Albany, CA, 94710, USA
    2. Plant Gene Expression Center and UC Berkeley, 800 Buchanan Street, Albany, CA, 94710, USA
  • ISSN:1472-6750
文摘
Background The mycobacteriophage large serine recombinase Bxb1 catalyzes site-specific recombination between its corresponding attP and attB recognition sites. Previously, we and others have shown that Bxb1 has catalytic activity in various eukaryotic species including Nicotiana tabacum, Schizosaccharomyces pombe, insects and mammalian cells. Results In this work, the Bxb1 recombinase gene was transformed and constitutively expressed in Arabidopsis thaliana plants harboring a chromosomally integrated attP and attB-flanked target sequence. The Bxb1 recombinase successfully excised the target sequence in a conservative manner and the resulting recombination event was heritably transmitted to subsequent generations in the absence of the recombinase transgene. In addition, we also show that Bxb1 recombinase expressing plants can be manually crossed with att-flanked target transgenic plants to generate excised progeny. Conclusion The Bxb1 large serine recombinase performs site-specific recombination in Arabidopsis thaliana germinal tissue, producing stable lines free of unwanted DNA. The precise site-specific deletion produced by Bxb1 in planta demonstrates that this enzyme can be a useful tool for the genetic engineering of plants without selectable marker transgenes or other undesirable exogenous sequences.

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