Genetic analysis and gene fine mapping for a rice novel mutant (rl 9(t) ) with rolling leaf character

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• 作者：Changjie Yan (1)
  Song Yan (1)
  Zhengqiu Zhang (1)
  Guohua Liang (1)
  Jufei Lu (1)
  Minghong Gu (1)
  
• 关键词：rice (Oryza sativa L.) ; rolling leaf gene ; molecular marker ; physical map
• 刊名：Chinese Science Bulletin
• 出版年：2006
• 出版时间：January 2006
• 年：2006
• 卷：51
• 期：1
• 页码：63-69
• 全文大小：1389KB
• 参考文献：1. Yuan, L. P., Super-high yield hybrid rice breeding, Hybrid Rice (in Chinese), 1997, 12(6): 1-.
  2. Shen, F. C., Several opinions on how to use rolling leaf character of rice in breeding, Guizhou Agricultural Science (in Chinese), 1983, (5): 6-8.
  3. Chen, Z. X., Pan, X. B., Hu, J., Relationship between rolling leaf and ideal plant type of rice ( / Oryza sativa L.), Journal of Jiangsu Agricultural Research (in Chinese), 2001, 22(4): 88-1.
  4. Chen, Z. X., Chen, G., Pan, X. B., Genetic expression and effects of rolling leaf gene / Rl (t) in hybrid rice ( / Oryza sativa L.). Acta Agronomica Sinica (in Chinese), 2002 (6): 847-851.
  5. Lang, Y. Z., Zhang, Z. J., Gu, X. Y. / et al., Physiological and ecological effects of crimpy leaf character in rice ( / Oryza sativa L.). Leaf orientation, canopy structure and light distribution, Acta Agronomica Sinica (in Chinese), 2004, 30(8): 806-10.
  6. Lang, Y. Z., Zhang, Z. J., Gu, X. Y. / et al., Physiological and eco-logical effects of crimpy leaf character in rice ( / Oryza sativa L.). Photosynthetic character, dry mass production and yield forming, Acta Agronomica Sinica (in Chinese), 2004: 30(9): 883-87.
  7. Li, S. G., Ma, Y. Q., He, P. / et al., Genetic analysis and mapping the flag leaf rolling rice ( / Oryza sativa L.), Journal of Sichuan Agricultural University (in Chinese), 1998, 16(4): 391-93.
  8. Shao, Y. J., Chen, Z. X., Zhang, Y. F. / et al., One major QTL mapping and physical map construction for rolling leaf in rice, Acta Genetica Sinica (in Chinese), 2005, 32(5): 501-06.
  9. Gu, X. Y., Gu, M. H., Genetic analysis of a rolling leaf character in rice, Hereditas (in Chinese), 1995, 17(5): 20-3.
  10. Rogers, S. O., Bendch, A. J., Extraction of DNA from plant tissues, Plant Mol. Biol. Man., 1988, A6: 1-0.
  11. Yan, C. J., Liang, G. H., Zhu, L. H. / et al., RFLP analysis on wide compatibility genes in rice variety Dular of ecotype Aus, Acta Genetica Sinica (in Chinese), 2000, 27(5): 409-17.
  12. Lander, E. S., Green, P., Abrahamson, J. / et al., Mapmaker: An interactive computer package for constructing primary genetic link-age maps of experimental and natural populations, Genomics, 1987, 1: 174-81. CrossRef
  13. Yan, C. J., Liang, G. H., Gu, S. L. / et al., Molecular marker analysis and genetic basis for sterility of typical / indica/japonica hybrids, Acta Genetica Sinica (in Chinese), 2003, 30(3): 267-76.
  14. Micol, L. J., Hake, S., The development of plant leaves, Plant Physiol., 2003, 131: 389-94. CrossRef
  15. Byrne, M., Timmermans, M., Kidner, C. / et al., Development of leaf shape, Curr. Opin. Plant Biol., 2001, 4: 38-3. CrossRef
  16. Waites, R., Hudson, A., phantastica: A gene required for dorsoventrality of leaves in / Antirrhinum majus, Development, 1995, 121: 2143-154.
  17. Waites, R., Selvadurai, H. R., Oliver, I. R. / et al., The / PHANTASTICA gene encodes a MYB transcription factor involved in growth and dorsoventrality of lateral organs in Antirrhinum, Cell, 1998, 93: 779-89. CrossRef
  18. Tsiantis, M., Schneeberger, R., Golz, J. F. / et al., The maize rough sheath2 gene and leaf development programs in monocot and dicot plants, Science, 1999, 284: 154-56. CrossRef
  19. Bowman, J. L., Smyth, D. R., CRABS CLAW, a gene that regulates carpel and nectary development in / Arabidopsis, encodes a novel protein with zinc finger and helix-loop-helix domains, Development, 1999, 126: 2387-396.
  20. Sawa, S., Watanabe, K., Goto, K. / et al., / FILAMENTOUS FLOWER, a meristem and organ identity gene of / Arabidopsis, encodes a protein with a zinc finger and HMG-related domains, Genes Dev., 1999, 13: 1079-088.
  21. Siegfried, K. R., Eshed, Y., Baum, S. F. / et al., Members of the / YABBYgene family specify abaxial cell fate in / Arabidopsis, Development, 1999, 126: 4117-128.
  22. Villanueva, J. M., Broadhvest, J., Hauser, B. A. / et al., / INNER NO OUTER regulates abaxial-adaxial patterning in / Arabidopsis ovules, Genes Dev., 1999, 13: 3160-169. CrossRef
  23. McConnell, J. R., Barton, M. K., Leaf polarity and meristem formation in Arabidopsis, Development, 1998, 125: 2935-942.
  24. Bohmert, K., Camus, I., Bellini, C. / et al., / AGO1 defines a novel locus of / Arabidopsis controlling leaf development, EMBO J., 1998, 17: 170-80. CrossRef
  25. McConnell, J. R., Barton, M. K., Effect of mutations in the / PINHEAD gene of / Arabidopsis on the formation of shoot apical meristems, Dev. Genet., 1995, 16: 358-66. CrossRef
  26. Timmermans, M. C. P., Schultes, N. P., Jankovsky, J. P. / et al., Leafbladeless1 is required for dorsoventrality of lateral organs in maize, Development, 1998, 125: 2813-823.
  27. Nelson, J. M., Lane, B., Freeling, M., Expression of a mutant maize gene in the ventral leaf epidermis is sufficient to signal a switch of the leaf’s dorsoventral axis, Development, 2002, 129: 4581-589.
  28. Juarez, M. T., Kui, J. S., Thomas, J. / et al., microRNA-mediated repression of rolling leaf1 specifies maize leaf polarity, Nature, 2004, 428: 84-8. CrossRef
  29. Kidner, C. A., Martienssen, R. B., The developmental role of microRNA in plants, Curr. Opin. Plant Biol., 2005, 8: 38-4. CrossRef
  30. Carrington, J. C., Ambros, V., Role of microRNAs in plant and animal development, Science, 2003, 301(18): 336-38.
  31. Mallory, A. C., Reinhart, B. J., Jones-Rhoades, M. W. / et al., MicroRNA control of / PHABULOSA in leaf development: Importance of pairing to the microRNA 5-region, EMBO J., 2004, 23: 3356-364. CrossRef
  32. Kinder, C. A., Martienssen, R. A., Spatially restricted microRNA directs leaf polarity through / ARGONAUTE1, Nature, 2004, 428: 81-4.
  33. Sunkar, R., Girke, T., Jain, P. K. / et al., Cloning and characterization of microRNAs from rice, Plant Cell, 2005, 17: 1397-411. CrossRef
  34. Nishimura, A., Ito, M., Kamiya, N. / et al., / OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice, Plant J., 2002, 30(2): 189-01. CrossRef
  35. Postma-Haarsma, A. D., Rueb, S., Scarpella, E. / et al., Developmental regulation and downstream effects of knox class homeobox genes / Oskn2 and / Oskn3 from rice, Plant Mol. Biol., 2002, 48: 423-41. CrossRef
  36. Sentoku, N., Sato, Y., Matsuoka, M., Overexpression of rice / OSH genes induces ectopic shoots on leaf sheaths of transgenic rice plants, Dev. Biol., 2000, 220: 358-64. CrossRef
  37. Fujisawa, Y., Kato, T., Ohki, S. / et al., Suppression of the heterotrimeric G protein causes abnormal morphology, including dwarfism, in rice, Proc. Natl. Acad. Sci. USA, 1999, 96: 7575-580. CrossRef
  
• 作者单位：Changjie Yan (1)
  Song Yan (1)
  Zhengqiu Zhang (1)
  Guohua Liang (1)
  Jufei Lu (1)
  Minghong Gu (1)
  
  1. Jiangsu Key Laboratory of Plant Functional Genomics/Jiangsu Key Laboratory for Crop Genetics and Physiology, Yangzhou University, Yangzhou, 225009, China
  
• ISSN：1861-9541

文摘

Leaf shape is an important parameter for ideotype breeding in rice, and the rolling of leaf is also beneficial to efficient ripening of grains. This encourages the explorations of new genes that regulate leaf shape. In this study, genetic analysis and gene mapping were carried out for a novel rolling leaf mutant identified from japonica variety Zhonghua 11. The SSR marker analysis showed that the mutant was controlled by a single recessive gene (rl 9(t) ) located on chromosome 9. Fine mapping of the Rl 9(t) locus was conducted with 30 new STS markers developed around Rl 9(t) anchored region based on the sequence diversity between Nipponbare and 93-1. The fine mapping necessitated the contruction of a PAC contig encompassing the Rl 9(t) locus, which was delimited to a 42 kb region. This could therefore enhance the cloning of the target gene in further studies.