Genetic variability of blueberry scorch virus isolates from highbush blueberry in New York State

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• 作者：El?bieta Kalinowska ; Patricia Marsella-Herrick ; Marc Fuchs
• 关键词：Blueberry scorch virus ; Evolution ; Genetic variability ; Highbush blueberry ; Purifying selection ; Recombination
• 刊名：Archives of Virology
• 出版年：2015
• 出版时间：June 2015
• 年：2015
• 卷：160
• 期：6
• 页码：1537-1542
• 全文大小：870 KB
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• 作者单位：El?bieta Kalinowska (1)
  Patricia Marsella-Herrick (2)
  Marc Fuchs (2)
  
  1. Department of Plath Pathology, Faculty of Horticulture, Biotechnology and Landscape Architecture, Warsaw University of Life Sciences, 159 Nowoursynowska Street, 02-776, Warsaw, Poland
  2. Section of Plant Pathology and Plant Microbe Biology, School of Integrative Plant Science, New York State Agriculture Experiment Station, Cornell University, Geneva, NY, 14456, USA
  
• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Biomedicine
  Virology
  Medical Microbiology
  Infectious Diseases
  
• 出版者：Springer Wien
• ISSN：1432-8798

文摘

The genetic variability of blueberry scorch virus (BlScV) isolates from New York was determined within a portion of the RNA-dependent RNA polymerase gene and the triple gene block and coat protein (CP) genes. Phylogenetic analysis of 19 New York isolates and other isolates for which sequence information is available in GenBank revealed two distinct clades, regardless of the coding region analyzed, and limited variability within (0.029 ± 0.007) and between (0.183 ± 0.032) phylogroups. Recombination events were identified in the CP gene of three New York isolates, and codons of the five BlScV genes characterized were found to be under neutral or negative selective pressure.