Microsatellite markers for the endangered orchids Cattleya labiata Lindl. and C. warneri T. Moore (Orchidaceae)
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  • 作者:Paulo Ricardo M. Almeida (1)
    M. Cristina López-Roberts (1)
    Bianca B. Zanotto Vigna (2)
    Anete P. Souza (3)
    Aristóteles Góes-Neto (1)
    Cássio van den Berg (1)
  • 关键词:Cattleya ; SSR ; Genetic diversity ; Conservation genetics
  • 刊名:Conservation Genetics Resources
  • 出版年:2013
  • 出版时间:September 2013
  • 年:2013
  • 卷:5
  • 期:3
  • 页码:791-794
  • 全文大小:168KB
  • 参考文献:1. Barros F, Vinhos F, Rodrigues VT, Berberena FFVA, Fraga CN (2010) Orchidaceae. In: Forzza R (ed) (org) Catálogo de Plantas e Fungos do Brasil, vol 2. Andrea Jakobsson Estúdio, Rio de Janeiro, pp 1344-426
    2. Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11-5
    3. Kemp S (2002) PIC Calculator Extra. http://www.genomics.liv.ac.uk/animal/pic.html. Accessed 1 July 2010
    4. Leach R (2000) Perfect microsatellite repeat finder. http://sgdp.iop.kcl.ac.uk/nikammar. Accessed 1 July 2010
    5. Mudunuri S, Nagarajaram H (2007) IMEx: imperfect microsatellite extractor. Bioinformatics 23:1181-187 CrossRef
    6. Peakall R, Smouse PE (2012) GenAlEx 6.5: genetic analysis in excel. Population genetic software for teaching and research-an update. Bioinformatics 19:2537-539 CrossRef
    7. Provan J, Wilson PJ (2007) Development of microsatellites for the peat moss / Sphagnum capillifolium using ISSR cloning. Mol Ecol Notes 7:254-56 CrossRef
    8. Rozen S, Skaletsky H (2000) Primer3 on the WWW for general users and for biologist programmers. In: Krawetz S, Misener S (eds) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, New Jersey, USA, pp 365-86
    9. Van den Berg C (2008) New combinations in the genus / Cattleya Lindl. (Orchidaceae). Neodiversity 3:3-2
    10. Van den Berg C, Hinggins WE, Dressler RL, Whitten WM, Soto-Arenass MA, Chase MW (2009) A phylogenetic study of Laeliinae (Orchidaceae) based on combined nuclear and plastid DNA sequences. Ann Bot 104:417-30 CrossRef
  • 作者单位:Paulo Ricardo M. Almeida (1)
    M. Cristina López-Roberts (1)
    Bianca B. Zanotto Vigna (2)
    Anete P. Souza (3)
    Aristóteles Góes-Neto (1)
    Cássio van den Berg (1)

    1. Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Av. Transnordestina s.n., Feira de Santana, Bahia, 44036-900, Brazil
    2. Embrapa Southeast Livestock, CP 339, S?o Carlos, S?o Paulo, 13560-970, Brazil
    3. Centro de Biologia Molecular e Engenharia Genética (CBMEG) e Instituto de Biologia, Universidade Estadual de Campinas, CP 6010, Campinas, S?o Paulo, 13083-970, Brazil
文摘
In this study, we developed a new set of microsatellite markers for endangered Cattleya labiata and Cattleya warneri. Also the first microsatellite loci for Cattleya, these markers can be useful for studies in the conservation genetics of these species. Twenty-one new microsatellite primers pairs were characterized by cloning an enriched library, and two libraries were obtained by cloning inter-simple sequence repeats. Thirteen polymorphic primers were found, and the remaining eight were monomorphic for both species. Our results indicate that these new microsatellite markers have the potential to be used as a tool for studying the genetic diversity of C. labiata and C. warneri and for future studies focusing mating systems and the detection of hybrids.

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