Virtual screening-based identification of lead molecules as selective TACE inhibitors
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  • 作者:Prashant R. Murumkar ; Mayank Kumar Sharma ; Rajani Giridhar…
  • 关键词:TNF ; α ; TACE inhibitors ; IK ; 682 ; Docking ; Virtual screening
  • 刊名:Medicinal Chemistry Research
  • 出版年:2015
  • 出版时间:January 2015
  • 年:2015
  • 卷:24
  • 期:1
  • 页码:226-244
  • 全文大小:1,652 KB
  • 参考文献:1. Bandarage UK, Wang T, Come JH, Perola E, Wei Y, Rao BG (2008) Novel thiol based TACE inhibitors. Part 2: Rational design, synthesis, and SAR of thiol-containing aryl sulfones. Bioorg Med Chem Lett 18:44-8 CrossRef
    2. Dai C, Li D, Janeta PM, Zhao L, Girijavallabhan VM, Rosner KE, Lavey BJ, Rizvi R, Shankar BB, Wong MK, Guo Z, Orth P, Strickland CO, Sun J, Niu X, Chen S, Kozlowski JA, Lundell DJ, Piwinski JJ, Shih NY, Siddiqui AM (2011) 2-(2-Aminothiazol-4-yl) pyrrolidine-based tartrate diamides as potent, selective and orally bioavailable TACE inhibitors. Bioorg Med Chem Lett 21:3172-176 CrossRef
    3. DasGupta S, Murumkar PR, Giridhar R, Yadav MR (2009a) Current perspective of TACE inhibitors: a review. Bioorg Med Chem 17:444-59 CrossRef
    4. DasGupta S, Murumkar PR, Giridhar R, Yadav MR (2009b) Studies on novel 2-imidazolidinones and tetrahydropyrimidin-2(1 / H)-ones as potential TACE inhibitors: design, synthesis, molecular modeling, and preliminary biological evaluation. Bioorg Med Chem 17:3604-617 CrossRef
    5. Dass VS, Byoung KS (2012) Targeting TNF superfamily members for therapeutic intervention in rheumatoid arthritis. Cytokine 57:305-12 CrossRef
    6. Friesner RA, Banks JL, Murphy RB, Halgren TA, Klicic JJ, Mainz DT, Repasky MP, Knoll EH, Shelley M, Perry JK, Shaw DE, Francis P, Shenkin PS (2004) Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy. J Med Chem 47:1739-749 CrossRef
    7. Gonen T, Cheng Y, Sliz P, Hiroaki Y, Fujivoshi Y, Harrison S, Walz T (2005) Lipid protein interactions in double layered two-dimensional AQP0 crystal. Nature 438:633-38 CrossRef
    8. Kleywegt GJ, Jones TA (1997) Model building and refinement practice. Methods Enzymol 277:208-30 CrossRef
    9. Li D, Janeta PM, Belanger DB, Caldwell J, Dai C, David M, Girijavallabhan VM, Lavey BJ, Lee JF, Liu Z, Mazzola R, Rizvi R, Rosner KE, Shankar B, Spitler J, Ting PC, Vaccaro H, Yu W, Zhou G, Zhu Z, Niu X, Sun J, Guo Z, Orth P, Chen S, Kozlowski JA, Lundell DJ, Madison V, McKittrick B, Piwinski JJ, Shih NY, Shipps GW, Siddiqui AM, Li CO (2010) Structure and activity relationships of tartrate-based TACE inhibitors. Bioorg Med Chem Lett 20:4812-815 CrossRef
    10. Lipinski CA, Lombardo F, Dominy BW, Feeney PJ (2001) Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Adv Drug Del Rev 46:3-6 CrossRef
    11. Mendelsohm LD (2004) Chem draw 8 ultra, windows and macintosh versions. J Chem Inf Mod 44:2225-226 CrossRef
    12. Murumkar PR, Giridhar R, Yadav MR (2008) 3D-quantitative structure–activity relationship studies on benzothiadiazepine hydroxamates as inhibitors of tumor necrosis factor-α converting enzyme. Chem Biol Drug Des 71:363-73 CrossRef
    13. Murumkar PR, DasGupta S, Zambre VP, Giridhar R, Yadav MR (2009) Development of predictive 3D-QSAR CoMFA and CoMSIA models for β-aminohydroxamic Acid-derived tumor necrosis factor-α converting enzyme inhibitors. Chem Biol Drug Des 73:97-07 CrossRef
    14. Murumkar PR, DasGupta S, Chandani SR, Giridhar R, Yadav MR (2010a) Novel TACE inhibitors in drug discovery: a review of patented compounds. Expert Opin Ther Pat 20:31-7 CrossRef
  • 刊物主题:Pharmacology/Toxicology; Biochemistry, general; Cell Biology;
  • 出版者:Springer US
  • ISSN:1554-8120
文摘
Some novel selective inhibitors of tumor necrosis factor-α converting enzyme (TACE) have been identified from virtual screening of Asinex database containing 2,06,759 compounds using HTS docking with TACE and MMPs and application of Lipinski’s rule of five. Docking studies were carried out for known inhibitors along with lead compounds. Pyrrolidine-based tartrate diamides were docked into the active site of TACE along with MMPs to get insight regarding the binding interactions of active and inactive TACE inhibitors. The 3D orientations of the obtained hits from virtual screening were found to match with that of known inhibitors supporting the binding of the hit molecules into the active site of TACE.

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