Significantly Diverged Did2/Vps46 Orthologues from the Protozoan Parasite Giardia lamblia
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  • 作者:Somnath Dutta ; Nabanita Saha ; Atrayee Ray ; Srimonti Sarkar
  • 刊名:Current Microbiology
  • 出版年:2015
  • 出版时间:September 2015
  • 年:2015
  • 卷:71
  • 期:3
  • 页码:333-340
  • 全文大小:4,996 KB
  • 参考文献:1.Adam RD (2001) Biology of Giardia lamblia. Clin Microbiol Rev 14:447鈥?75. doi:10.鈥?128/鈥婥MR.鈥?4.鈥?.鈥?47 PubMed Central PubMed View Article
    2.Azmi IF, Davies BA, Xiao J et al (2008) ESCRT-III family members stimulate Vps4 ATPase activity directly or via Vta1. Dev Cell 14:50鈥?1. doi:10.鈥?016/鈥媕.鈥媎evcel.鈥?007.鈥?0.鈥?21 PubMed View Article
    3.Babst M, Wendland B, Estepa EJ, Emr SD (1998) The Vps4p AAA ATPase regulates membrane association of a Vps protein complex required for normal endosome function. EMBO J 17:2982鈥?993. doi:10.鈥?093/鈥媏mboj/鈥?7.鈥?1.鈥?982 PubMed Central PubMed View Article
    4.Diamond LS, Harlow DR, Cunnick CC (1978) A new medium for the axenic cultivation of Entamoeba histolytica and other Entamoeba. Trans R Soc Trop Med Hyg 72:431鈥?32PubMed View Article
    5.Hanson PI, Shim S, Merrill SA (2009) Cell biology of the ESCRT machinery. Curr Opin Cell Biol 21:568鈥?74. doi:10.鈥?016/鈥媕.鈥媍eb.鈥?009.鈥?6.鈥?02 PubMed View Article
    6.Henne WM, Buchkovich NJ, Emr SD (2011) The ESCRT pathway. Dev Cell 21:77鈥?1. doi:10.鈥?016/鈥媕.鈥媎evcel.鈥?011.鈥?5.鈥?15 PubMed View Article
    7.Hurley JH (2008) ESCRT complexes and the biogenesis of multivesicular bodies. Curr Opin Cell Biol 20:4鈥?1. doi:10.鈥?016/鈥媕.鈥媍eb.鈥?007.鈥?2.鈥?02 PubMed Central PubMed View Article
    8.Jimenez AJ, Maiuri P, Lafaurie-Janvore J (2014) ESCRT machinery is required for plasma membrane repair. Science 343:1247136. doi:10.鈥?126/鈥媠cience.鈥?247136 PubMed View Article
    9.Kane AV, Ward HD, Keusch GT, Pereira ME (1991) In vitro encystation of Giardia lamblia: large-scale production of in vitro cysts and strain and clone differences in encystation efficiency. J Parasitol 77:974鈥?81PubMed View Article
    10.Katzmann DJ, Babst M, Emr SD (2001) Ubiquitin-dependent sorting into the multivesicular body pathway requires the function of a conserved endosomal protein sorting complex, ESCRT-I. Cell 106:145鈥?55. doi:10.鈥?016/鈥媠0092-8674(01)00434-2 PubMed View Article
    11.Lanfredi-Rangel A, Attias M, de Carvalho TM et al (1998) The peripheral vesicles of trophozoites of the primitive protozoan Giardia lamblia may correspond to early and late endosomes and to lysosomes. J Struct Biol 123:225鈥?35. doi:10.鈥?006/鈥媕sbi.鈥?998.鈥?035 PubMed View Article
    12.Leung KF, Dacks JB, Field MC (2008) Evolution of the multivesicular body ESCRT machinery; retention across the eukaryotic lineage. Traffic 9:1698鈥?716. doi:10.鈥?111/鈥媕.鈥?600-0854.鈥?008.鈥?0797 PubMed View Article
    13.Longtine MS, McKenzie A, Demarini DJ et al (1998) Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14:953鈥?61. doi:10.鈥?002/鈥?SICI)1097-0061(199807)14:鈥?0<953:鈥婣ID-YEA293>3.鈥?.鈥婥O;2-U PubMed View Article
    14.L贸pez-reyes I, Ba帽uelos C, Betanzos A, Orozco E (2009) A bioinformatical approach to study the endosomal sorting complex required for transport (ESCRT) machinery in protozoan parasites: the Entamoeba histolytica Case. Bioinformatics鈥擳rends and methodologies, In tech, pp 289鈥?12
    15.Marti M, Li Y, Schraner EM et al (2003) The secretory apparatus of an ancient eukaryote : protein sorting to separate export pathways occurs before formation of transient Golgi-like compartments. Mol Biol Cell 14:1433鈥?447. doi:10.鈥?091/鈥媘bc.鈥婨02-08-0467 PubMed Central PubMed View Article
    16.McDonald B, Martin-Serrano J (2009) No strings attached: the ESCRT machinery in viral budding and cytokinesis. J Cell Sci 122:2167鈥?177. doi:10.鈥?242/鈥媕cs.鈥?28308 PubMed Central PubMed View Article
    17.Miras SL, Merino MC, Gottig N et al (2013) The giardial VPS35 retromer subunit is necessary for multimeric complex assembly and interaction with the vacuolar protein sorting receptor. Biochim Biophys Acta 1833:2628鈥?638. doi:10.鈥?016/鈥媕.鈥媌bamcr.鈥?013.鈥?6.鈥?15 PubMed View Article
    18.Muzio艂 T, Pineda-Molina E, Ravelli RB et al (2006) Structural basis for budding by the ESCRT-III factor CHMP3. Dev Cell 10:821鈥?30. doi:10.鈥?016/鈥媕.鈥媎evcel.鈥?006.鈥?3.鈥?13 PubMed View Article
    19.Nickerson DP, West M, Henry R, Odorizzi G (2010) Regulators of Vps4 ATPase activity at endosomes differentially influence the size and rate of formation of intralumenal vesicles. Mol Biol Cell 21:1023鈥?032. doi:10.鈥?091/鈥媘bc.鈥婨09-0776 PubMed Central PubMed View Article
    20.Obita T, Saksena S, Ghazi-Tabatabai S et al (2007) Structural basis for selective recognition of ESCRT-III by the AAA ATPase Vps4. Nature 449:735鈥?39. doi:10.鈥?038/鈥媙ature06171 PubMed View Article
    21.Odorizzi G, Babst M, Emr SD (1998) Fab1p PtdIns(3)P 5-kinase function essential for protein sorting in the multivesicular body. Cell 95:847鈥?58. doi:10.鈥?016/鈥婼0092-8674(00)81707-9 PubMed View Article
    22.Reyes FC, Buono RA, Roschzttardtz H et al (2014) A novel endosomal sorting complex required for transport (ESCRT) component in Arabidopsis thaliana controls cell expansion and development. J Biol Chem 289:4980鈥?988. doi:10.鈥?074/鈥媕bc.鈥婱113.鈥?29685 PubMed Central PubMed View Article
    23.Samson RY, Obita T, Hodgson B et al (2011) Molecular and structural basis of ESCRT-III recruitment to membranes during archaeal cell division. Mol Cell 41:186鈥?96. doi:10.鈥?016/鈥媕.鈥媘olcel.鈥?010.鈥?2.鈥?18 PubMed Central PubMed View Article
    24.Saksena S, Sun J, Chu T, Emr SD (2007) ESCRTing proteins in the endocytic pathway. Trends Biochem Sci 32:561鈥?73. doi:10.鈥?016/鈥媕.鈥媡ibs.鈥?007.鈥?9.鈥?10 PubMed View Article
    25.Shestakova A, Hanono A, Drosner S et al (2010) Assembly of the AAA ATPase Vps4 on ESCRT-III. Mol Biol Cell 21:1059鈥?071. doi:10.鈥?091/鈥媘bc.鈥婨09-07-0572 PubMed Central PubMed View Article
    26.Sinha A, Mandal S, Banerjee S et al (2011) Identification and characterization of a聽FYVE聽domain from the early diverging eukaryote聽Giardia lamblia. Curr Microbiol 62:1179鈥?184. doi:10.鈥?007/鈥媠00284-010-9845-5 PubMed View Article
    27.Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673鈥?680. doi:10.鈥?093/鈥媙ar/鈥?2.鈥?2.鈥?673 PubMed Central PubMed View Article
    28.Waterhouse AM, Procter JB, Martin DM et al (2009) Jalview Version 2鈥攁 multiple sequence alignment editor and analysis workbench. Bioinformatics 25:1189鈥?191. doi:10.鈥?093/鈥媌ioinformatics/鈥媌tp033 PubMed Central PubMed View Article
    29.Zhao J, Lin W, Ma X et al (2010) The protein kinase Hal5p is the high-copy suppressor of lithium-sensitive mutations of genes involved in the sporulation and meiosis as well as the ergosterol biosynthesis in Saccharomyces cerevisiae. Genomics 95:290鈥?98. doi:10.鈥?016/鈥媕.鈥媦geno.鈥?010.鈥?2.鈥?10 PubMed View Article
  • 作者单位:Somnath Dutta (1)
    Nabanita Saha (1)
    Atrayee Ray (1)
    Srimonti Sarkar (1)

    1. Department of Biochemistry (Room 226), Bose Institute, Centenary Campus, P 1/12 C.I.T. Scheme VII M, Kolkata, 700054, West Bengal, India
  • 刊物类别:Biomedical and Life Sciences
  • 刊物主题:Life Sciences
    Microbiology
    Biotechnology
  • 出版者:Springer New York
  • ISSN:1432-0991
文摘
The endosomal compartment performs extensive sorting functions in most eukaryotes, some of which are accomplished with the help of the multivesicular body (MVB) sorting pathway. This pathway depends on the sequential action of complexes, termed the endosomal sorting complex required for transport (ESCRT). After successful sorting, the crucial step of recycling of the ESCRT complex components requires the activation of the AAA ATPase Vps4, and Did2/Vps46 plays an important role in this activation event. The endolysosomal system of the protozoan parasite Giardia lamblia appears to lack complexity, for instead of having distinct early endosomes, late endosomes and lysosomes, there are only peripheral vesicles (PVs) that are located close to the cell periphery. Additionally, comparative genomics studies predict the presence of only a subset of the ESCRT components in G. lamblia. Thus, it is possible that the MVB pathway is not functional in G. lamblia. To address this issue, the present study focused on the two putative orthologues of Did2/Vps46 of G. lamblia as their function is likely to be pivotal for a functional MVB sorting pathway. In spite of considerable sequence divergence, compared to other eukaryotic orthologues, the proteins encoded by both these genes have the ability to function as Did2/Vps46 in the context of the yeast ESCRT pathway. Furthermore, they also localized to the cellular periphery, where PVs are also located. Thus, this report is the first to provide experimental evidence indicating the presence of a functional ESCRT component in G. lamblia by characterizing the putative Did2/Vps46 orthologues.

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