Ribosomal DNA, tri- and bi-partite pericentromeres in the permanent translocation heterozygote Rhoeo spathacea
详细信息    查看全文
  • 作者:Hieronim Golczyk (1)
    Robert Hasterok (2)
    Marek Szklarczyk (3)
  • 关键词:Pericentromere ; Permanent translocation heterozygosity ; rDNA ; Rhoeo
  • 刊名:Cellular & Molecular Biology Letters
  • 出版年:2010
  • 出版时间:December 2010
  • 年:2010
  • 卷:15
  • 期:4
  • 页码:651-664
  • 全文大小:1724KB
  • 参考文献:1. Cleland, R.E. Oenothera. Cytogenetics and evolution, Academic Press, London and New York, 1972.
    2. Holsinger, K.E. and Ellstrand, N.C. The evolution and ecology of permanent translocation heterozygotes. Am. Nat. 124 (1984) 48鈥?1. CrossRef
    3. Golczyk, H., Hasterok, R. and Joachimiak, A.J. FISH-aimed karyotyping and characterization of Renner complexes in permanent heterozygote / Rhoeo spathacea. Genome 48 (2005) 145鈥?53. CrossRef
    4. Golczyk, H., Musial, K., Rauwolf, U., Meurer, J., Herrmann, R.G. and Greiner, S. Meiotic events in / Oenothera - a non-standard pattern of chromosome behaviour. Genome 51 (2008) 952鈥?58. CrossRef
    5. Rauwolf, U., Golczyk, H., Meurer, J., Herrmann, R.G. and Greiner, S. Molecular marker systems for / Oenothera genetics. Genetics 180 (2008) 1289鈥?306. CrossRef
    6. Levin, D.A. The role of chromosomal change in plant evolution, Oxford University Press, New York, 2002.
    7. Sax, K. Chromosome ring formation in / Rhoeo discolor. Cytologia 3 (1931) 36鈥?3.
    8. Lin, Y.J. and Paddock, E.F. Ring-position and frequency of adjacent distribution of meiotic chromosomes in / Rhoeo spathacea. Am. J. Bot. 60 (1973) 685鈥?90. CrossRef
    9. Natarajan, A.T. and Natarajan, S. The heterochromatin of / Rhoeo discolor. Hereditas 72 (1972) 323鈥?30. CrossRef
    10. Pettenati, M.J. Giemsa C-banding of / Rhoeo ( / Commelinaceae). Genetica 74 (1987) 219鈥?24. CrossRef
    11. Golczyk, H. and Joachimiak, A. Karyotype structure and interphase chromatin organization in / Rhoeo spathacea (Sw.) Stearn ( / Commelinaceae). Acta Biol. Cracov. Ser. Bot. 41 (1999) 143鈥?50.
    12. Carniel, K. Enst盲ndige nucleolen und zahl der nucleolenchromosomen bei / Rhoeo discolor. 脰ster. Bot. Z. 107 (1960) 403鈥?08. CrossRef
    13. Golczyk, H. and Joachimiak, A. NORs in / Rhoeo revisited. Caryologia 56 (2003) 31鈥?5.
    14. Golczyk, H., Joachimiak, A. and Hasterok, R. Pericentromeric GC-rich chromatin in / Rhoeo. Evidence from soma and germ-line. Caryologia 61 (2008) 388鈥?91.
    15. Schweizer, D. and Ambros, P.F. Chromosome banding. Meth. Mol. Biol. 29 (1994) 97鈥?11.
    16. Unfried, I. and Gruendler, P. Nucleotide sequence of the 5.8S and 25S rRNA genes and the internal transcribed spacers from / Arabidopsis thaliana. Nucleic Acids Res. 18 (1990) 4011. CrossRef
    17. Gerlach, W.L. and Dyer, T.A. Sequence organization of the repeating units in the nucleus of wheat which contain 5S rRNA genes. Nucleic Acids Res. 11 (1980) 4851鈥?865. CrossRef
    18. Jenkins, G. and Hasterok, R. BAC landing on chromosomes of / Brachypodium distachyon for comparative genome alignment. Nat. Protoc. 2 (2007) 88鈥?8. CrossRef
    19. UTHSCSA ImageTool v.3.0 (http://ddsdx.uthscsa.edu/dig/itdesc.html).
    20. Gross, M.C., Feldberg, E., Cella, D.M., Schneider, M.C., Schneider, C.H., Porto, J.I.R. and Martins, C. Intriguing evidence of translocations in Discus fish ( / Symphysodon, Cichlidae) and a report of the largest meiotic chromosomal chain observed in vertebrates. Heredity 102 (2009) 435鈥?41. CrossRef
    21. Bennetzen, J.L. Transposable element contributions to plant gene and genome evolution. Plant Mol. Biol. 42 (2000) 251鈥?69. CrossRef
    22. Schubert, I. Chromosome evolution. Curr. Opin. Plant Biol. 10 (2007) 109鈥?15. CrossRef
    23. Kenton, A., Davies, A. and Jones, K, Identification of Renner complexes and duplications in permanent hybrids of / Gibasis pulchella ( / Commelinaceae). Chromosoma 95 (1987) 424鈥?34. CrossRef
    24. Mesquita, D.R., Porto, J.I.R. and Feldberg, E. Chromosomal variability in the wild ornamental species of / Symphysodon ( / Perciformes: Cichlidae) from Amazon. Neotrop. Ichthyol. 6 (2008) 181鈥?90. CrossRef
    25. Hunt, D.R. / Campelia, Rhoeo, Zebrina united with / Tradescantia. Kew Bull. 41 (1986) 401鈥?05. CrossRef
    26. Darlington, C.D. Chromosome behaviour and structural hybridity in the / Tradescantiae. II. Jour. Genet. 35 (1937) 259鈥?80. CrossRef
    27. Sax, K. Chromosome behaviour and nuclear development in / Tradescantia. Genetics 22 (1937) 523鈥?33.
    28. Swanson, C.R. The distribution of inversions in / Tradescantia. Genetics 25 (1940) 438鈥?65.
    29. Coleman, L.C. The relation of chromocentres to the differential segments in / Rhoeo discolor Hance. Amer. J. Bot. 28 (1941) 742鈥?48. CrossRef
    30. Schubert, I. and Wobus, U. In situ hybridization confirms jumping nucleolus organizing regions in / Allium. Chromosoma 92 (1985) 143鈥?48. CrossRef
    31. Cheung, S.W., Sun, L. and Featherstone, T. Molecular cytogenetic evidence to characterize breakpoint regions in Robertsonian translocations. Cytogenet. Cell Genet. 54 (1990) 97鈥?02. CrossRef
    32. Hall, K.J. and Parker, J.S. Stable chromosome fission associated with rDNA mobility. Chromosome Res. 3 (1995) 417鈥?22. CrossRef
    33. Thomas, H.M., Harper, J.A. and Morgan, W.G. Gross chromosome rearrangements are occurring in an accession of the grass / Lolium rigidum. Chromosome Res. 9 (2001) 585鈥?90. CrossRef
    34. Gernand, D., Golczyk, H., Rutten, T., Ilnicki, T., Houben, A. and Joachimiak, A.J. Tissue culture triggers chromosome alterations, amplification and transposition of repeat sequences in / Allium fistulosum. Genome 50 (2007) 435鈥?42. CrossRef
    35. Butler, D.K. Ribosomal DNA is a site of chromosome breakage in aneuploid strains of / Neurospora. Genetics 131 (1992) 581鈥?92.
    36. Tagashira, N. and Kondo, K. Chromosome phylogeny of / Zamia and / Ceratozamia by means of Robertsonian changes detected by fluorescence / in situ hybridization (FISH) technique of rDNA. Plant Syst. Evol. 227 (2001) 145鈥?55. CrossRef
    37. Moscone, E.A., Samuel, R., Schwarzacher, T., Schweizer, D. and Pedrosa-Harand, A. Complex rearrangements are involved in / Cephalanthera ( / Orchidaceae) chromosome evolution. Chromosome Res. 15 (2007) 931鈥?43. CrossRef
    38. Hirai, H., Yamamoto, M.T., Taylor, R.W. and Imai, H.T. Genomic dispersion of 28S rDNA during karyotype evolution in the ant genus / Myrmecia ( / Formicidae). Chromosoma 105 (1996) 190鈥?96. CrossRef
    39. Bombarov谩, M., Marec, F., Nguyen, P. and 艩pakulov谩, M. Divergent location of ribosomal genes in chromosomes of fish thornyheaded worms, / Pomphorhynchus laevis and / Pomphorhynchus tereticollis ( / Acanthocephala). Genetica 131 (2007) 141鈥?49. CrossRef
    40. Chung, M.C., Lee, Y.I., Cheng, Y,Y,, Chou, Y.J. and Lu, C.F. Chromosomal polymorphism of ribosomal genes in the genus / Oryza. Theor. Appl. Genet. 116 (2008) 745鈥?53. CrossRef
    41. Nguyen, P., Sahara, K., Yoshido, A. and Marec, F. Evolutionary dynamics of rDNA clusters on chromosomes of moths and butterflies ( / Lepidoptera). Genetica 138 (2010) 343鈥?54. CrossRef
    42. Gross, M.C., Schneider, C.H., Valente, G.T., Porto, J.I.R., Martins, C. and Feldberg, E. Comparative cytogenetic analysis of the genus / Symphysodon (Discus Fishes, / Cichlidae): chromosomal characteristics of retrotransposons and minor ribosomal DNA. Cytogenet. Genome Res. 127 (2009) 43鈥?3. CrossRef
    43. Mieczkowski, P.A., Lemoine, F.J. and Petes, T.D. Recombination between retrotransposons as a source of chromosome rearrangements in the yeast / Saccharomyces cerevisiae. DNA Repair 5 (2006) 1010鈥?020. CrossRef
    44. Dubcovsky, J. and Dvo艡谩k, J. Ribosomal RNA multigene loci - nomads of the / Triticeae genomes. Genetics 140 (1995) 1367鈥?377.
    45. Cabrero, J. and Camacho, J.P.M. Location and expression of ribosomal RNA genes in grasshoppers: abundance of silent and cryptic loci. Chromosome Res. 16 (2008) 595鈥?07. CrossRef
  • 作者单位:Hieronim Golczyk (1)
    Robert Hasterok (2)
    Marek Szklarczyk (3)

    1. Department of Plant Cytology and Embryology, Institute of Botany, Jagiellonian University, Grodzka 52, 31-044, Krak贸w, Poland
    2. Department of Plant Anatomy and Cytology, University of Silesia, Jagiello艅ska 28, 40-032, Katowice, Poland
    3. Department of Genetics, Plant Breeding and Seed Science, Agricultural University of Krakow, Al. 29 Listopada 54, 31-425, Krak贸w, Poland
文摘
High- and low-stringency FISH and base-specific fluorescence were performed on the permanent translocation heterozygote Rhoeo spathacea (2n = 12). Our results indicate that 45S rDNA arrays, rDNA-related sequences and other GC-rich DNA fraction(s) are located within the pericentromeric regions of all twelve chromosomes, usually colocalizing with the chromomycin A3-positive bands. Homogenization of the pericentromeric regions appears to result from the concerted spread of GC-rich sequences, with differential amplification likely. We found new 5S rDNA patterns, which suggest a variability in the breakpoints and in the consequent chromosome reorganizations. It was found that the large 5S rDNA locus residing on each of the 8E and 9E arms consisted of two smaller loci. On each of the two chromosome arms 3b and 4b, in addition to the major subtelomeric 5S rDNA locus, a new minor locus was found interstitially about 40% along the arm length. The arrangement of cytotogenetic landmarks and chromosome arm measurements are discussed with regard to genome repatterning in Rhoeo.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700