Fine-scale spatial genetic structure across a strong environmental gradient in the saltmarsh plant Puccinellia maritima
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  • 作者:R. Rouger ; A. S. Jump
  • 关键词:Puccinellia maritima ; Saltmarsh ; Polyploidy ; Microsatellite ; Genetic structure ; sPCA
  • 刊名:Evolutionary Ecology
  • 出版年:2015
  • 出版时间:July 2015
  • 年:2015
  • 卷:29
  • 期:4
  • 页码:609-623
  • 全文大小:1,466 KB
  • 参考文献:Adler D, Murdoch D, Nenadic O, et al (2012) rgl: 3D visualization device system (OpenGL). http://?cran.?r-project.?org/?package=?rgl . Accessed March 2015
    Akima H, Gebhardt A, Petzoldt T, Maechler M (2009) Akima: interpolation of irregularly spaced data. R package version 0.5-11. http://?cran.?r-project.?org/?package=?akima . Accessed March 2015
    Alberto F (2009) MsatAllele_1. 0: an R package to visualize the binning of microsatellite alleles. J Hered 100:394-97PubMed View Article
    Barber HN, Jackson WD (1957) Natural selection in action in Eucalyptus. Nature 179:1267-269View Article
    Barton N, Bengtsson BO (1986) The barrier to genetic exchange between hybridising populations. Heredity 57:357-76PubMed View Article
    Bockelmann AC, Reusch TBH, Bijlsma R, Bakker JP (2003) Habitat differentiation vs. isolation-by-distance: the genetic population structure of Elymus athericus in European salt marshes. Mol Ecol 12:505-15PubMed View Article
    Boorman LA (2003) Saltmarsh review. An overview of coastal saltmarshes, their dynamic and sensitivity characteristics for conservation and management. Report to Joint Nature Conservation Committee, Peterborough
    Davy AJ, Smith H (1985) Population differentiation in the life-history characteristics of salt-marsh annuals. Plant Ecol 61:117-25View Article
    De Leeuw J, Van den Dool A, de Munck W et al (1991) Factors influencing the soil salinity regime along an intertidal gradient. Estuar Coast Shelf Sci 32:87-7View Article
    Doebeli L, Dieckmann U (2003) Speciation along environmental gradient. Nature 421:259-64PubMed View Article
    Dorken ME, Eckert CG (2001) Severely reduced sexual reproduction in northern populations of a clonal plant, Decodon verticillatus (Lythraceae). J Ecol 89:339-50View Article
    Dray S, Dufour AB (2007) The ade4 package: implementing the duality diagram for ecologists. J Stat Softw 22:1-0
    Dufresne F, Stift M, Vergilino R, Mable BK (2014) Recent progress and challenges in population genetics of polyploid organisms: an overview of current state-of-the-art molecular and statistical tools. Mol Ecol 23:40-9PubMed View Article
    Edelaar P, Bolnick DI (2012) Non-random gene flow: an underappreciated force in evolution and ecology. Trends Ecol Evol 27:659-65PubMed View Article
    Endler JA (1977) Geographic variation, speciation, and clines. Princeton University Press, Princeton
    Engels JG, Jensen K (2010) Role of biotic interactions and physical factors in determining the distribution of marsh species along an estuarine salinity gradient. Oikos 119:679-85View Article
    Feder JL, Egan SP, Nosil P (2012) The genomics of speciation-with-gene-flow. Trends Genet 28:342-50PubMed View Article
    Festoc G (1999) Etude microévolutive de populations de Puccinellia maritima (Huds.) Parl. (Poaceae) dans le cadre d’une succession primaire. PhD thesis, Université de Rennes 1
    Gallagher JL, Somers GF, Grant DM et al (1988) Persistent differences in two forms of Spartina alterniflora: a common garden experiment. Ecology 69:1005-008View Article
    Gedan KB, Silliman BR, Bertness MD (2009) Centuries of human-driven change in salt marsh ecosystems. Annu Rev Mar Sci 1:117-41View Article
    Gonzalo-Turpin H, Hazard L (2009) Local adaptation occurs along altitudinal gradient despite the existence of gene flow in the alpine plant species Festuca eskia. J Ecol 97:742-51View Article
    Gray AJ (1985) Adaptation in perennial coastal plants-with particular reference to heritable variation in Puccinellia maritima and Ammophila arenaria. Plant Ecol 61:179-88View Article
    Gray AJ (1987) Genetic change during succession in plants. In: Gray AJ, Crawley MJ, Edwards PJ (eds) Colonization, succession and stability. 26th Symposium of the British Ecological Society. Blackwell Scientific Publications, pp 273-93
    Gray AJ, Scott R (1977) Puccinellia maritima (Huds.) Parl.: (Poa maritima Huds.; Glyceria maritima (Huds.) Wahlb.). J Ecol 65:699-16View Article
    Gray AJ, Parsell RJ, Scott R (1979) The genetic stucture of plant populations in relation to the development of salt marshes. In: Jefferies RL, Davy AJ (eds) Ecological processes in coastal environments. 1st European Ecological Symposium and 19th Symposium of The British Ecological Society. Blackwell Scientific Publication, pp 43-1
    Hartigan J, Wong M (1979) Algorithm AS 136: a k-means clustering algorithm. J R Stat Soc Ser C (Appl Stat) 28:100-08
    Huckle JM, Potter JA, Marrs RH (2000) Influence of environmental factors on the growth and interactions between salt marsh plants: effects of salinity, sediment and waterlogging. J Ecol 88:492-05View Article
    Jefferies RL (1977) Growth responses of coastal halophytes to inorganic nitrogen. J Ecol 65:847-65View Article
    Jombart T, Devillard S, Dufour A-B, Pontier D (2008) Revealing cryptic spatial patterns in genetic variability by a new multivariate method. Heredity 101:92-03PubMed View Article
    Jump AS (2010) Asse
  • 作者单位:R. Rouger (1)
    A. S. Jump (1)

    1. Biological and Environmental Sciences, School of Natural Sciences, University of Stirling, Stirling, FK9 4LA, UK
  • 刊物类别:Biomedical and Life Sciences
  • 刊物主题:Life Sciences
    Evolutionary Biology
    Plant Sciences
    Human Genetics
  • 出版者:Springer Netherlands
  • ISSN:1573-8477
文摘
Saltmarsh forms the transition between maritime and terrestrial environments where biotic and abiotic conditions vary substantially along a gradient in elevation. Theoretical and empirical population genetics studies have focused on the influence of environmental gradients on intra-specific genetic variation. Contrastingly, only a few studies have focused on genetic variation in saltmarsh plants, despite the potentially strong influence of environmental gradients shaping diversity in these species. In the present paper, we assess the genetic structure of the saltmarsh plant Puccinellia maritima collected across an elevation gradient in restored and natural saltmarsh. Both spatial autocorrelograms of genetic variation and spatial analysis of principal components detected genetic structure?in the natural saltmarsh organized along the gradient in elevation, yet no such pattern was identified considering distance between individuals without taking elevation into account. In combination with previous phenotypic analyses, our results imply that ecological divergence likely plays a key role in shaping genetic structure within saltmarsh species. Comparison of restored and natural saltmarsh indicated that interspecific competition plays an important role in shaping the genetic structure observed on the natural saltmarsh. The results of this study demonstrate that saltmarshes are valuable models in which to test effects of ecological differentiation and, by extension, provide a better understanding of the functioning of this threatened environment.

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