A
s CD1 protein
s recycle between the cell
surface and endo
some
s, they
show altered receptivene
ss to lipid antigen loading. We hypothe
sized that change
s in proton concentration encountered within di
stinct endo
somal compartment
s influence the charge
state of re
sidue
s near the entrance to the CD1 groove and thereby control antigen loading. Molecular dynamic model
s identified flexible area
s of the CD1b heavy chain in the
superior and lateral wall
s of the A′ pocket. In the
se
same area
s, re
sidue
s that carry charge in a pH-dependent manner (D60,
E62) were found to tether the rigid
src="http://www.
sciencedirect.com/
scidirimg/entitie
s/204e.gif" alt="greek
small letter alpha" title="greek
small letter alpha" border="0">1 helix to flexible area
s of the
src="http://www.
sciencedirect.com/
scidirimg/entitie
s/204e.gif" alt="greek
small letter alpha" title="greek
small letter alpha" border="0">2 helix and the 50-60 loop. After di
sruption of the
se tether
s with acid pH or mutation, we ob
served increa
sed a
ssociation and di
ssociation of lipid
s with CD1b and preferential pre
sentation of antigen
s with bulky lipid tail
s. We propo
se that ionic tether
s act a
s molecular
switche
s that re
spond to pH fluxe
s during endo
somal recycling and regulate the conformation of the CD1 heavy chain to control the
size and rate of antigen
s captured.