Membrane microdomains (MDs), or lipid rafts, are recently identified dynamic membrane domains on which various signal-transductions are performed. Intracellular Ca
2+-binding proteins participate in the Ca
2+ signaling through interaction with various proteins. Neurocalcin
(NC
) is a member of neuronal calcium sensor (NCS) protein family and shows Ca
2+-dependent binding to the cell membrane through N-terminal myristoyl moiety. Since NC
was identified as a Ca
2+-dependent binding protein to neuronal MDs, its binding proteins may participate in the signal-transduction on the MDs. In an immunoprecipitate using anti-NC
antibody, alsin (ALS2), a protein product of one of the responsive genes for amyotrophic lateral sclerosis, was detected through LC–MS/MS. Specific antibody to alsin was produced and immunoprecipitation using this antibody showed co-sedimentation of NC
. Some part of alsin bound to brain-derived MD fraction in the presence of Ca
2+ ions and eluted out by the chelation of Ca
2+ ions, as in the case of NC
. Immunostaining of cultured neurons showed broad distribution of alsin and NC
, and membrane association of these proteins were increased through Ca
2+ loading by maitotoxin. These results suggest that alsin binds cell membrane in a Ca
2+-dependent manner through NC
and regulates membrane dynamics.