光敏色素作用因子PIFs参与植物激素信号转导的分子机制
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摘要
光敏色素作用因子(PIFs)属于bHLH转录因子家族,在植物的生长发育中起到重要调节作用。作为一个关键的胞内信号调控组分,PIFs扮演着整合不同激素信号通路"枢纽"的角色。现有研究表明,PIFs能影响GA、ABA、IAA等激素的合成,调控GA、BR、JA、IAA、ABA、乙烯等激素的信号传递。本文重点阐述PIFs在植物激素信号中调控功能的研究进展,以期为进一步探索PIFs的功能及机制提供帮助。
Phytochrome interacting factors(PIFs) belonging to basic helix-loop-helix(b HLH) transcription factors family, play an important role in plant growth and development. As the hubs of signal network in plant, PIFs integrate multiple plant hormone signals to regulate the transcriptional network. Existing research shows that PIFs can not only affect the synthesis of GA, ABA and IAA, but also regulate signal transmission of GA, BR, JA, IAA, ABA and ethylene. This review summarizes the research progress of function of PIFs in plant homone, and provides help for the further study of PIFs.
Phytochrome interacting factors(PIFs) belonging to basic helix-loop-helix(b HLH) transcription factors family, play an important role in plant growth and development. As the hubs of signal network in plant, PIFs integrate multiple plant hormone signals to regulate the transcriptional network. Existing research shows that PIFs can not only affect the synthesis of GA, ABA and IAA, but also regulate signal transmission of GA, BR, JA, IAA, ABA and ethylene. This review summarizes the research progress of function of PIFs in plant homone, and provides help for the further study of PIFs.
引文
Achard P,Gusti A,Cheminant S,Alioua M,Dhondt S,Coppens F,Beemster GT,Genschik P(2009).Gibberellin signaling controlscell proliferation rate in Arabidopsis.Curr Biol,19(14):1188-1193
Achard P,Liao L,Jiang C,Desnos T,Bartlett J,Fu XP(2007).DEL-LAs contribute to plant photomorphogenesis.Plant Physiol,143(3):1163-1172
Achard P,Renou JP,Berthome R,Harberd NP,Genschik P(2008).Plant DELLAs restrain growth and promote survival of adversity by reducing the levels of reactive oxygen species.Curr Biol,18(9):656-660
An F,Zhang X,Zhu Z,Ji Y,He W,Jiang Z,Li M,Guo H(2012).Coordinated regulation of apical hook development by gibberellins and ethylene in etiolated Arabidopsis seedlings.Cell Res,22(5):915-927
Bae G,Choi G(2008).Decoding of light signals by plant phytochromes and their interacting proteins.Annu Rev Plant Biol,59:281-311
Bai MY,Fan M,Oh E,Wang ZY(2012a).A triple helix-loop-helix/basic helix-loop-helix cascade controls cell elongation downstream of multiple hormonal and environmental signaling pathways in Arabidopsis.Plant Cell,24(12):4917-4929
Bai MY,Shang JX,Oh E,Fan M,Bai Y,Zentella R,Sun TP,Wang ZY(2012b).Brassinosteroid,gibberellin and phytochrome impinge on a common transcription module in Arabidopsis.Nat Cell Biol,14(8):810-817
Bernardo-Garcia S,de Lucas M,Martinez C,Espinosa-Ruiz A,Daviere JM,Prat S(2014).BR-dependent phosphorylation modulates PIF4 transcriptional activity and shapes diurnal hypocotyl growth.Genes Dev,28(15):1681-1694
Clouse SD,Langford M,Mc Morris TC(1996).A brass-inosteroid-insensitive mutant in Arabidopsis thaliana exhibits multiple defects in growth and development.Plant Physiol,111:671-678
Clouse SD,Sasse JM(1998).BRASSINOSTEROIDS:essential regulators of plant growth and development.Annu Rev Plant Physiol Plant Mol Biol,49:427-451
Cutler SR,Rodriguez PL,Finkelstein RR,Abrams SR(2010).Abscisic acid:emergence of a core signaling network.Annu Rev Plant Biol,61(1):651-679
de Lucas M,Daviere JM,Rodriguez-Falcon M,Pontin M,Iglesias-Pedraz JM,Lorrain S,Fankhauser C,Blazquez MA,Titarenko E,Prat S(2008).A molecular framework for light and gibberellin control of cell elongation.Nature,451(7177):480-484
de Lucas M,Prat S(2014).PIFs get BRright:PHYTOCHROMEINTERACTING FACTORs as integrators of light and hormonal signals.New Phytol,202(4):1126-1141
Dill A,Jung HS,Sun TP(2011).The DELLA motif is essential for gibberellin-induced degradation of RGA.Proc Natl Acad Sci USA,98(24):14162-14167
Eriksson S,Bohlenius H,Moritz T,Nilsson O(2006).GA4 is the active gibberellin in the regulation of LEAFY transcription and Arabidopsis floral initiation.Plant Cell,18(9):2172-2181
Feng SH,Martinez C,Gusmaroli G,Wang Y,Zhou JL,Wang F,Chen LY,Yu L,Iglesias-Pedraz JM,Kircher S,et al(2008).Coordinated regulation of Arabidopsis thaliana development by light and gibberellins.Nature,451(7177):475-480
Franklin KA,Lee SH,Patel D,Kumar SV,Spartz AK,Gu C,Ye S,Yu P,Breen G,Cohen JD,et al(2011).Phytochrome-interacting factor 4(PIF4)regulates auxin biosynthesis at high temperature.Proc Natl Acad Sci USA,108(50):20231-20235
Gabriele S,Rizza A,Martone J,Circelli P,Costantino P,Vittorioso P(2010).The Dof protein DAG1 mediates PIL5 activity on seed germination by negatively regulating GA biosynthetic gene AtGA3ox1.Plant J,61(2):312-323
Gallego-BartoloméJ,Minguet EG,Grau-Enguix F,Abbas M,Locascio A,Thomas SG,AlabadíD,Blázquez MA(2012).Molecular mechanism for the interaction between gibberellin and brassinosteroid signaling pathways in Arabidopsis.Proc Natl Acad Sci USA,109(33):13446-13451
Gao Y,Jiang W,Dai Y,Xiao N,Zhang CQ,Li H,Lu Y,Wu MQ,Tao XY,Deng DX,et al(2015).A maize phytochrome-interacting factor 3 improves drought and salt stress tolerance in rice.Plant Mol Biol,87(4-5):413-428
Gonzalez CV,Ibarra SE,Piccoli PN,Botto JF,Boccalandro HE(2012).Phytochrome B increases drought tolerance by enhancing ABAsensitivity in Arabidopsis thaliana.Plant Cell Environ,35(11):1958-1968
Grennan AK(2008).Ethylene response factors in jasmonate signaling and defense response.Plant Physiol,146(4):1457-1458
Hedden P,Thomas SG(2012).Gibberellin biosynthesis and its regulation.Biochem J,444(1):11-25
Hirano K,Ueguchi-Tanaka M,Matsuoka M(2008).GID1-mediated gibberellin signaling in plants.Trends Plant Sci,13(4):192-199
Hornitschek P,Kohnen MV,Lorrain S,Rougemont J,Ljung K,López-Vidriero I,Franco-Zorrilla JM,Solano R,Trevisan M,Pradervand S,et al(2012).Phytochrome interacting factors 4and 5 control seedling growth in changing light conditions by directly controlling auxin signaling.Plant J,71(5):699-711
Hornitschek P,Lorrain S,Zoete V,Michielin O,Fankhauser C(2009).Inhibition of the shade avoidance response by formation of nonDNA binding bH LH heterodimers.EMBO J,28(24):3893-3902
Hou X,Lee LY,Xia K,Yan Y,Yu H(2010).DELLAs modulate jasmonate signaling via competitive binding to JAZs.Dev Cell,19(6):884-894
Huq E,Al-Sady B,Hudson M,Kim C,Apel K,Quail PH(2004).Phytochrome-interacting factor 1 is a critical b HLH regulator of chlorophyll biosynthesis.Science,305(5692):1937-1941
Jiang W,Xiao N,Lu Y,Dai Y,Wu MQ,Chen JM,Gao Y(2014).Biological function of phytochrome-interacting factors in plant.Plant Physiol J,50(6):698-706(in Chinese with English abstract)[江薇,肖宁,陆怡,戴毅,吴美琴,陈建民,高勇(2014).植物光敏色素作用因子PIFs的生物学功能.植物生理学报,50(6):698-706]
Johnson PR,Ecker JR(1998).The ethylene gas signal transduction pathway:a molecular perspective.Annu Rev Genet,32(4):227-254
Khanna R,Huq E,Kikis EA,Al-Sady B,Lanzatella C,Quail PH(2004).A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors.Plant Cell,16(11):3033-3044
Khanna R,Shen Y,Marion CM,Tsuchisaka A,Theologis A,Schafer E,Quail PH(2007).The basic helix-loop-helix transcription factor PIF5 acts on ethylene biosynthesis and phytochrome signaling by distinct mechanisms.Plant Cell,19(12):3915-3929
Kim DH,Yamaguchi S,Lim S,Oh E,Park J,Hanada A,Kamiya Y,Choi G(2008).SOMNUS,a CCCH-type zinc finger protein in Arabidopsis,negatively regulates light-dependent seed germination downstream of PIL5.Plant Cell,20(5):1260-1277
Kim J,Kang H,Park J,Kim W,Yoo J,Lee N,Kim J,Yoon TY,Choi G(2016).PIF1-interacting transcription factors and their binding sequence elements determine the in vivo targeting sites of PIF1Plant Cell,28(6):1388-1405
Krishna P(2003).Brassinosteroid-mediated stress responses.J Plant Growth Regul,22(4):289-297
Lau OS,Deng XW(2010).Plant hormone signaling lightens up:integrators of light and hormones.Curr Opin Plant Biol,13(5):571-577
Lee KP,Piskurewicz U,Tureckova V,Carat S,Chappuis R,Strnad MFankhauser C,Lopez-Molina L(2012).Spatially and genetically distinct control of seed germination by phytochromes A and B.Genes Dev,26(17):1984-1996
Leivar P,Monte E(2014).PIFs:systems integrators in plant development.Plant Cell,26(1):56-78
Leivar P,Monte E,Cohn MM,Quail PH(2012).Phytochrome signaling in green Arabidopsis seedlings:impact assessment of a mutually negative Phy B-PIF feedback loop.Mol Plant,5(3):734-749
Leivar P,Quail PH(2011).PIFs:pivotal components in a cellular signaling hub.Trends Plant Sci,16(1):19-28
Leivar P,Tepperman JM,Monte E,Calderon RH,Liu TL,Quail PH(2009).Definition of early transcriptional circuitry involved in light-induced reversal of PIF-imposed repression of photomor-phogenesis in young Arabidopsis seedlings.Plant Cell,21(11):3535-3553
Li BZ,Zhao X,An GY(2011).Recent advances in research of gibberellin.Chin Ag Sci Bull,27(1):1-5(in Chinese with English abstract)[李保珠,赵翔,安国勇(2011).赤霉素的研究进展.中国农学通报,27(1):1-5]
Li L,Ljung K,Breton G,Schmitz RJ,Pruneda-Paz J,Cowing-Zitron C,Cole BJ,Ivans LJ,Pedmale UV,Jung HS,et al(2012).Linking photoreceptor excitation to changes in plant architecture Genes Dev,26(8):785-790
Liu QX,Li MS,Guo J(2012).Regulation of jasmonic acid biosynthesis and jasmonic acid signaling pathway.Plant Physiol J,48(9):837-844(in Chinese with English abstract)[刘庆霞,李梦莎,国静(2012).茉莉酸生物合成的调控及其信号通路.植物生理学报,48(9):837-844]
Lorrain S,Allen T,Duek PD,Whitelam GC,Fankhauser C(2008)Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting b HLH transcription factors.Plant J,53(2):312-323
Nemhauser JL,Hong F,Chory J(2006).Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses.Cell,126(3):467-475
Ni M,Tepperman JM,Quail PH(1998).PIF3,a phytochrome-interacting factor necessary for normal photoinduced signal transduction,is a novel basic helix-loop-helix protein.Cell,95(5):657-667
Oh E,Kang H,Yamaguchi S,Park J,Lee D,Kamiya Y,Choi G(2009).Genome-wide analysis of genes targeted by phytochrome interacting factor 3-LIKE5 during seed germination in Arabidopsis.Plant Cell,21(2):403-419
Oh E,Yamaguchi S,Hu JH,Yusuke J,Jung B,Paik I,Lee HS,Sun TP,Kamiya Y,Choi G(2007).PIL5,a phytochrome-interacting b HLH protein,regulates gibberellin responsiveness by binding directly to the GAI and RGA promoters in Arabidopsis seeds.Plant Cell,19(4):1192-1208
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Achard P,Liao L,Jiang C,Desnos T,Bartlett J,Fu XP(2007).DEL-LAs contribute to plant photomorphogenesis.Plant Physiol,143(3):1163-1172
Achard P,Renou JP,Berthome R,Harberd NP,Genschik P(2008).Plant DELLAs restrain growth and promote survival of adversity by reducing the levels of reactive oxygen species.Curr Biol,18(9):656-660
An F,Zhang X,Zhu Z,Ji Y,He W,Jiang Z,Li M,Guo H(2012).Coordinated regulation of apical hook development by gibberellins and ethylene in etiolated Arabidopsis seedlings.Cell Res,22(5):915-927
Bae G,Choi G(2008).Decoding of light signals by plant phytochromes and their interacting proteins.Annu Rev Plant Biol,59:281-311
Bai MY,Fan M,Oh E,Wang ZY(2012a).A triple helix-loop-helix/basic helix-loop-helix cascade controls cell elongation downstream of multiple hormonal and environmental signaling pathways in Arabidopsis.Plant Cell,24(12):4917-4929
Bai MY,Shang JX,Oh E,Fan M,Bai Y,Zentella R,Sun TP,Wang ZY(2012b).Brassinosteroid,gibberellin and phytochrome impinge on a common transcription module in Arabidopsis.Nat Cell Biol,14(8):810-817
Bernardo-Garcia S,de Lucas M,Martinez C,Espinosa-Ruiz A,Daviere JM,Prat S(2014).BR-dependent phosphorylation modulates PIF4 transcriptional activity and shapes diurnal hypocotyl growth.Genes Dev,28(15):1681-1694
Clouse SD,Langford M,Mc Morris TC(1996).A brass-inosteroid-insensitive mutant in Arabidopsis thaliana exhibits multiple defects in growth and development.Plant Physiol,111:671-678
Clouse SD,Sasse JM(1998).BRASSINOSTEROIDS:essential regulators of plant growth and development.Annu Rev Plant Physiol Plant Mol Biol,49:427-451
Cutler SR,Rodriguez PL,Finkelstein RR,Abrams SR(2010).Abscisic acid:emergence of a core signaling network.Annu Rev Plant Biol,61(1):651-679
de Lucas M,Daviere JM,Rodriguez-Falcon M,Pontin M,Iglesias-Pedraz JM,Lorrain S,Fankhauser C,Blazquez MA,Titarenko E,Prat S(2008).A molecular framework for light and gibberellin control of cell elongation.Nature,451(7177):480-484
de Lucas M,Prat S(2014).PIFs get BRright:PHYTOCHROMEINTERACTING FACTORs as integrators of light and hormonal signals.New Phytol,202(4):1126-1141
Dill A,Jung HS,Sun TP(2011).The DELLA motif is essential for gibberellin-induced degradation of RGA.Proc Natl Acad Sci USA,98(24):14162-14167
Eriksson S,Bohlenius H,Moritz T,Nilsson O(2006).GA4 is the active gibberellin in the regulation of LEAFY transcription and Arabidopsis floral initiation.Plant Cell,18(9):2172-2181
Feng SH,Martinez C,Gusmaroli G,Wang Y,Zhou JL,Wang F,Chen LY,Yu L,Iglesias-Pedraz JM,Kircher S,et al(2008).Coordinated regulation of Arabidopsis thaliana development by light and gibberellins.Nature,451(7177):475-480
Franklin KA,Lee SH,Patel D,Kumar SV,Spartz AK,Gu C,Ye S,Yu P,Breen G,Cohen JD,et al(2011).Phytochrome-interacting factor 4(PIF4)regulates auxin biosynthesis at high temperature.Proc Natl Acad Sci USA,108(50):20231-20235
Gabriele S,Rizza A,Martone J,Circelli P,Costantino P,Vittorioso P(2010).The Dof protein DAG1 mediates PIL5 activity on seed germination by negatively regulating GA biosynthetic gene AtGA3ox1.Plant J,61(2):312-323
Gallego-BartoloméJ,Minguet EG,Grau-Enguix F,Abbas M,Locascio A,Thomas SG,AlabadíD,Blázquez MA(2012).Molecular mechanism for the interaction between gibberellin and brassinosteroid signaling pathways in Arabidopsis.Proc Natl Acad Sci USA,109(33):13446-13451
Gao Y,Jiang W,Dai Y,Xiao N,Zhang CQ,Li H,Lu Y,Wu MQ,Tao XY,Deng DX,et al(2015).A maize phytochrome-interacting factor 3 improves drought and salt stress tolerance in rice.Plant Mol Biol,87(4-5):413-428
Gonzalez CV,Ibarra SE,Piccoli PN,Botto JF,Boccalandro HE(2012).Phytochrome B increases drought tolerance by enhancing ABAsensitivity in Arabidopsis thaliana.Plant Cell Environ,35(11):1958-1968
Grennan AK(2008).Ethylene response factors in jasmonate signaling and defense response.Plant Physiol,146(4):1457-1458
Hedden P,Thomas SG(2012).Gibberellin biosynthesis and its regulation.Biochem J,444(1):11-25
Hirano K,Ueguchi-Tanaka M,Matsuoka M(2008).GID1-mediated gibberellin signaling in plants.Trends Plant Sci,13(4):192-199
Hornitschek P,Kohnen MV,Lorrain S,Rougemont J,Ljung K,López-Vidriero I,Franco-Zorrilla JM,Solano R,Trevisan M,Pradervand S,et al(2012).Phytochrome interacting factors 4and 5 control seedling growth in changing light conditions by directly controlling auxin signaling.Plant J,71(5):699-711
Hornitschek P,Lorrain S,Zoete V,Michielin O,Fankhauser C(2009).Inhibition of the shade avoidance response by formation of nonDNA binding bH LH heterodimers.EMBO J,28(24):3893-3902
Hou X,Lee LY,Xia K,Yan Y,Yu H(2010).DELLAs modulate jasmonate signaling via competitive binding to JAZs.Dev Cell,19(6):884-894
Huq E,Al-Sady B,Hudson M,Kim C,Apel K,Quail PH(2004).Phytochrome-interacting factor 1 is a critical b HLH regulator of chlorophyll biosynthesis.Science,305(5692):1937-1941
Jiang W,Xiao N,Lu Y,Dai Y,Wu MQ,Chen JM,Gao Y(2014).Biological function of phytochrome-interacting factors in plant.Plant Physiol J,50(6):698-706(in Chinese with English abstract)[江薇,肖宁,陆怡,戴毅,吴美琴,陈建民,高勇(2014).植物光敏色素作用因子PIFs的生物学功能.植物生理学报,50(6):698-706]
Johnson PR,Ecker JR(1998).The ethylene gas signal transduction pathway:a molecular perspective.Annu Rev Genet,32(4):227-254
Khanna R,Huq E,Kikis EA,Al-Sady B,Lanzatella C,Quail PH(2004).A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors.Plant Cell,16(11):3033-3044
Khanna R,Shen Y,Marion CM,Tsuchisaka A,Theologis A,Schafer E,Quail PH(2007).The basic helix-loop-helix transcription factor PIF5 acts on ethylene biosynthesis and phytochrome signaling by distinct mechanisms.Plant Cell,19(12):3915-3929
Kim DH,Yamaguchi S,Lim S,Oh E,Park J,Hanada A,Kamiya Y,Choi G(2008).SOMNUS,a CCCH-type zinc finger protein in Arabidopsis,negatively regulates light-dependent seed germination downstream of PIL5.Plant Cell,20(5):1260-1277
Kim J,Kang H,Park J,Kim W,Yoo J,Lee N,Kim J,Yoon TY,Choi G(2016).PIF1-interacting transcription factors and their binding sequence elements determine the in vivo targeting sites of PIF1Plant Cell,28(6):1388-1405
Krishna P(2003).Brassinosteroid-mediated stress responses.J Plant Growth Regul,22(4):289-297
Lau OS,Deng XW(2010).Plant hormone signaling lightens up:integrators of light and hormones.Curr Opin Plant Biol,13(5):571-577
Lee KP,Piskurewicz U,Tureckova V,Carat S,Chappuis R,Strnad MFankhauser C,Lopez-Molina L(2012).Spatially and genetically distinct control of seed germination by phytochromes A and B.Genes Dev,26(17):1984-1996
Leivar P,Monte E(2014).PIFs:systems integrators in plant development.Plant Cell,26(1):56-78
Leivar P,Monte E,Cohn MM,Quail PH(2012).Phytochrome signaling in green Arabidopsis seedlings:impact assessment of a mutually negative Phy B-PIF feedback loop.Mol Plant,5(3):734-749
Leivar P,Quail PH(2011).PIFs:pivotal components in a cellular signaling hub.Trends Plant Sci,16(1):19-28
Leivar P,Tepperman JM,Monte E,Calderon RH,Liu TL,Quail PH(2009).Definition of early transcriptional circuitry involved in light-induced reversal of PIF-imposed repression of photomor-phogenesis in young Arabidopsis seedlings.Plant Cell,21(11):3535-3553
Li BZ,Zhao X,An GY(2011).Recent advances in research of gibberellin.Chin Ag Sci Bull,27(1):1-5(in Chinese with English abstract)[李保珠,赵翔,安国勇(2011).赤霉素的研究进展.中国农学通报,27(1):1-5]
Li L,Ljung K,Breton G,Schmitz RJ,Pruneda-Paz J,Cowing-Zitron C,Cole BJ,Ivans LJ,Pedmale UV,Jung HS,et al(2012).Linking photoreceptor excitation to changes in plant architecture Genes Dev,26(8):785-790
Liu QX,Li MS,Guo J(2012).Regulation of jasmonic acid biosynthesis and jasmonic acid signaling pathway.Plant Physiol J,48(9):837-844(in Chinese with English abstract)[刘庆霞,李梦莎,国静(2012).茉莉酸生物合成的调控及其信号通路.植物生理学报,48(9):837-844]
Lorrain S,Allen T,Duek PD,Whitelam GC,Fankhauser C(2008)Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting b HLH transcription factors.Plant J,53(2):312-323
Nemhauser JL,Hong F,Chory J(2006).Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses.Cell,126(3):467-475
Ni M,Tepperman JM,Quail PH(1998).PIF3,a phytochrome-interacting factor necessary for normal photoinduced signal transduction,is a novel basic helix-loop-helix protein.Cell,95(5):657-667
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