生物信息学在甘蔗研究中的应用概述
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摘要
在甘蔗糖业研究过程中,生物信息学的应用为甘蔗产业带来了新的研究方向。科研工作者和生产者可以结合现有常用数据库和生物信息学技术探测甘蔗深层研究机理,将其用于调控新品种选育及建立甘蔗防控体系。本篇文章对目前生物信息学在甘蔗品种选育和甘蔗防控体系中的研究现状进行了总结和综合分析,希望对甘蔗研究和生产提供一些新思路。
In the process of sugarcane industry research, the application of bioinformatics has brought a new research direction for the sugarcane industry. Combining common database and bioinformatics techniques to detect the mechanism of deep research on sugarcane, in order to regulate the breeding new varieties and establish sugarcane prevention and control system. Through the comprehensive analysis of the current research status of bioinformatics in sugarcane variety selection and sugarcane prevention and control system, hope to provide some new ideas for sugarcane research and production.
In the process of sugarcane industry research, the application of bioinformatics has brought a new research direction for the sugarcane industry. Combining common database and bioinformatics techniques to detect the mechanism of deep research on sugarcane, in order to regulate the breeding new varieties and establish sugarcane prevention and control system. Through the comprehensive analysis of the current research status of bioinformatics in sugarcane variety selection and sugarcane prevention and control system, hope to provide some new ideas for sugarcane research and production.
引文
[1]MOCHIDA K,SHINOZAKI.Genomics and bioinformatics resources for crop improvement[J].Plant Cell Physiology,2010,51(4):497-523.
[2]李晓,雷波.生物信息学理论及农业应用的发展趋势[J].西南农业学报,1999,12:32-35.
[3]RAM K S,SUJEET P S.Prospects of Functional Genomics in Sugarcane[J].Advances in Plant Breeding Strategies:Breeding,Biotechnology and Molecular Tools,2015:493.
[4]王雅琴,康峰.生物信息学及其在育种工作中的应用[J].遗传育种,2006(2):10-11.
[5]吴小斌,端木卜文,齐永文,等.甘蔗蔗糖磷酸合成酶基因SPSⅣ电子克隆及生物信息学分析[J].甘蔗糖业,2018(4):1-9.
[6]牛俊奇,杨丽涛,李杨瑞,等.甘蔗蔗糖转化酶家族基因的克隆、表达和生物信息学分析[G].中国作物学会会议论文集,2014:31-32
[7]吕爱丽,李旭娟,刘洪博,等.甘蔗ScHTD2基因的克隆及生物信息学分析[J].热带作物学报,2016(6):1133-1140.
[8]付正莉,刘蕊,王宁宁,等.植物分枝发育调控的研究进展[J].江苏农业科学,2018(13):17-21.
[9]陈云,马晶晶,张旭,等.甘蔗(Saccharum spp.hybrids)木菠萝素(Jacalin)基因的克隆及生物信息学分析[J].基因组学与应用生物学,2015(12):2674-2682.
[10]冯璐,吴转娣,张跃彬,等.甘蔗转基因的研究进展[J].中国农学通报,2016,32(33):130-137.
[11]杨川毓,施肖堑,张铃,等.抗花叶病转SrMV-P1基因甘蔗的活性氧代谢分析[J].热带作物学报,2012,33(6):1101-1106.
[12]杨川毓,张铃,郭莺,等.抗花叶病转S小弘B基因甘蔗的产量和糖分分析[J].热带作物学报,2012,33(5):843-847.
[13]SUGIHARTO B,ERMAWATI N,MORI H,et al.Identification and characterization of a gene encoding drought-inducible protein localizing in the bundle sheath cell of sugarcane[J].Plant Cell Physiol,43(3):350-354.
[14]张积森,郭春芳,王冰梅,等.甘蔗水分胁迫响应相关醛脱氢酶基因的克隆及其表达特征分析[J].中国农业科学,2009,42(8):2676-2685.
[15]刘金仙,阙友雄,郭晋隆,等.甘蔗S-腺苷蛋氨酸脱羧酶基因Sc-SAMD的克隆和表达分析[J].中国农业科学,2010,43(7):1448-1457.
[16]梁潘霞,李杨瑞,杨丽涛.甘蔗核苷二磷酸激酶(NDPK1)基因克隆及表达分析[J].热带作物学报,2012,33(12):2199-2205.
[17]李美,胡朝晖,安玉兴.甘蔗螟虫抗药性的研究展望[G].2015年全国甘蔗植保技术研讨会论文集,2015:164-166.
[18]申建梅,胡黎明,宾淑英,等.生物信息学在计算机辅助农药分子设计中的应用[J].安徽农业科学,2011,39(4):2427-2428,2445.
[19]邹小毛,刘华银,杨华铮.基于生物合理设计创制新农药的研究进展[J].浙江化工,2000,31(S1):97-99.
[20]HOLZINGER A,DEHMER M,JURISICA I.Knowledge discovery and interactive data mining in bioinformatics:tate-of-the-art,future challenges and research directions[J].BMC Bioinformatics,2014(15):11-19.
[2]李晓,雷波.生物信息学理论及农业应用的发展趋势[J].西南农业学报,1999,12:32-35.
[3]RAM K S,SUJEET P S.Prospects of Functional Genomics in Sugarcane[J].Advances in Plant Breeding Strategies:Breeding,Biotechnology and Molecular Tools,2015:493.
[4]王雅琴,康峰.生物信息学及其在育种工作中的应用[J].遗传育种,2006(2):10-11.
[5]吴小斌,端木卜文,齐永文,等.甘蔗蔗糖磷酸合成酶基因SPSⅣ电子克隆及生物信息学分析[J].甘蔗糖业,2018(4):1-9.
[6]牛俊奇,杨丽涛,李杨瑞,等.甘蔗蔗糖转化酶家族基因的克隆、表达和生物信息学分析[G].中国作物学会会议论文集,2014:31-32
[7]吕爱丽,李旭娟,刘洪博,等.甘蔗ScHTD2基因的克隆及生物信息学分析[J].热带作物学报,2016(6):1133-1140.
[8]付正莉,刘蕊,王宁宁,等.植物分枝发育调控的研究进展[J].江苏农业科学,2018(13):17-21.
[9]陈云,马晶晶,张旭,等.甘蔗(Saccharum spp.hybrids)木菠萝素(Jacalin)基因的克隆及生物信息学分析[J].基因组学与应用生物学,2015(12):2674-2682.
[10]冯璐,吴转娣,张跃彬,等.甘蔗转基因的研究进展[J].中国农学通报,2016,32(33):130-137.
[11]杨川毓,施肖堑,张铃,等.抗花叶病转SrMV-P1基因甘蔗的活性氧代谢分析[J].热带作物学报,2012,33(6):1101-1106.
[12]杨川毓,张铃,郭莺,等.抗花叶病转S小弘B基因甘蔗的产量和糖分分析[J].热带作物学报,2012,33(5):843-847.
[13]SUGIHARTO B,ERMAWATI N,MORI H,et al.Identification and characterization of a gene encoding drought-inducible protein localizing in the bundle sheath cell of sugarcane[J].Plant Cell Physiol,43(3):350-354.
[14]张积森,郭春芳,王冰梅,等.甘蔗水分胁迫响应相关醛脱氢酶基因的克隆及其表达特征分析[J].中国农业科学,2009,42(8):2676-2685.
[15]刘金仙,阙友雄,郭晋隆,等.甘蔗S-腺苷蛋氨酸脱羧酶基因Sc-SAMD的克隆和表达分析[J].中国农业科学,2010,43(7):1448-1457.
[16]梁潘霞,李杨瑞,杨丽涛.甘蔗核苷二磷酸激酶(NDPK1)基因克隆及表达分析[J].热带作物学报,2012,33(12):2199-2205.
[17]李美,胡朝晖,安玉兴.甘蔗螟虫抗药性的研究展望[G].2015年全国甘蔗植保技术研讨会论文集,2015:164-166.
[18]申建梅,胡黎明,宾淑英,等.生物信息学在计算机辅助农药分子设计中的应用[J].安徽农业科学,2011,39(4):2427-2428,2445.
[19]邹小毛,刘华银,杨华铮.基于生物合理设计创制新农药的研究进展[J].浙江化工,2000,31(S1):97-99.
[20]HOLZINGER A,DEHMER M,JURISICA I.Knowledge discovery and interactive data mining in bioinformatics:tate-of-the-art,future challenges and research directions[J].BMC Bioinformatics,2014(15):11-19.