美国花生种质资源果腐病抗性分子标记的筛选及分析
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  • 英文篇名:Screening and Analysis of Molecular Markers for Pod Rot Resistance in American Peanut(Arachis hypogaea) Germplasm Resources
  • 作者:刘阳杰 ; 何美敬 ; 崔顺立 ; 杨鑫雷 ; 穆国俊 ; Charles ; Y ; CHEN ; 刘立峰
  • 英文作者:LIU Yang-Jie;HE Mei-Jing;CUI Shun-Li;YANG Xin-Lei;MU Guo-Jun;Charles Y CHEN;LIU Li-Feng;Hebei Agricultural University;Auburn University;
  • 关键词:花生 ; 果腐病 ; SSR标记 ; InDel标记
  • 英文关键词:Peanut;;Pod rot;;SSR marker;;InDel marker
  • 中文刊名:NYSB
  • 英文刊名:Journal of Agricultural Biotechnology
  • 机构:河北农业大学;奥本大学;
  • 出版日期:2019-04-02
  • 出版单位:农业生物技术学报
  • 年:2019
  • 期:v.27
  • 基金:国家现代农业产业技术体系建设专项(CARS-13);; 国家自然科学基金(No.31771833);; 河北省博士后科研项目择优资助(No.B2017005028);; 河北省现代农业产业技术体系油料创新团队(No.HBCT2018090202)
  • 语种:中文;
  • 页:NYSB201904018
  • 页数:9
  • CN:04
  • ISSN:11-3342/S
  • 分类号:177-185
摘要
花生(Arachis hypogaea)果腐病(pod rot)是一种由真菌引起的严重病害,直接影响花生的产量及品质。抗病育种是该病害防治最经济、有效的途径,而抗性相关分子标记的筛选和利用又是提高选择效率和加快育种进程的重要手段。本研究以引进的77份美国花生种质资源为材料,利用12对SSR标记和48对插入缺失(insertion-deletion, InDel)标记,通过Pearson相关分析和多元线性逐步回归筛选与花生果腐病抗性相关的标记,并利用构建的分离群体对相关标记进行了验证。结果表明,美国种质资源遗传多样性丰富,具有不同抗性级别的材料。利用12对SSR引物对77份美国种质资源进行扩增,共获得103条多态性条带,多态性比率在20%~100%,平均79.23%。从受害指数进行相关和多元线性回归分析,获得了4个与花生果腐病抗性显著相关的SSR标记,分别为3A8、GM1760、PM163和14H6。分离群体验证结果表明获得的4对SSR标记可用于花生果腐病抗性分子标记的深入研究。15对InDel标记在材料中具有多态性,通过果腐病抗性-标记相关性分析获得了2对InDel标记,分别是InDel-004和InDel-020。花生果腐病抗性相关分子标记的获得为分子辅助选择育种及抗病相关基因的挖掘提供了重要参考。
        Peanut(Arachis hypogaea) pod rot, a worldwide fungal disease, has become one of the important diseases that directly affect the production and quality of peanut. Pod rot, as a kind of soil-borne disease, is difficult to be completely controlled with chemicals, cultivation methods or even biological techniques.Disease resistance breeding is an economical and effective way to control the pod rot. The screening and utilization of resistance related molecular markers will be an important means to improve the selection efficiency and speed up the breeding process. According to the results of the previous study, 12 pairs of SSR markers related to peanut disease resistance in references and 48 pairs of insertion-deletion(InDel) markers developed based on the result of stress resistance in this lab were selected to detect 77 American peanut germplasm resources, and the correlation between pod rot resistance and markers were analyzed. Pearson correlation analysis and multiple linear stepwise regression analysis were conducted based on the evaluation criteria of peanut pod rot resistance established in this laboratory. And the associated SSR markers of pod rot were validated with a following F2 segregation-population. The results revealed that there were abundant of genetic diversity and disease resistance in American germplasm resources, and inter-annual environmental factors had a significant impact on disease resistance of peanut germplasm. The results of SSR polymorphism showed that there were 103 polymorphic bands and the polymorphic rate of 20% to 100% with an average of79.23% among 77 peanut germplasm. The results of correlation and multiple linear stepwise regression analysis between injury index and SSR markers revealed that four markers including 3 A8, GM1760, PM163 and 14 H6 were significantly associated with peanut pod rot resistance. These 4 markers were considered could be well used in further study on the development of molecular markers related to peanut pod rot resistance.The validation results in F2 population showed that SSR marker 14 H6 had a close linkage with peanut pod rot which considered being the practical application value. 48 pairs of InDel markers were also used to screen American germplasm resources and 15 of 48 InDel markers showed polymorphism among the germplasms with the average polymorphic rate of 90.67%. The results of Pearson correlation analysis and stepwise multiple linear regression analysis showed that only 2 InDel(InDel-004, InDel-020) markers were found to be significantly correlated with peanut pod rot resistance. And the proportions of phenotypic variance explained by InDel-004 and InDel-020 were 5.1% and 5.9%, respectively, for what these two markers were not validated by F2 population due to low practical application value expectation. This study not only confirmed the resistance of peanut germplasm from different sources but also provided excellent materials forgenetic improvement of peanut disease resistance by rational utilization of germplasm. And furthermore, the acquisition of molecular markers related to peanut pod rot resistance could provide an important reference for molecular assisted selection breeding and the excavation of disease-related genes.
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