分子生物学技术应用于野生动物保护及扩散研究概况
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摘要
近年来,分子生物学技术在野生动物保护与管理中的应用越来越多,本文简单概述了微卫星技术在珍稀濒危野生动物个体识别、性别鉴定、亲子鉴定及家域分析中的应用,以及分子生物学手段用于珍稀濒危野生动物扩散生态学的研究情况。
The application of molecular biological technique to wildlife conservation and management is increasing. In this article,we summarize the application of microsatellite DNA in individual recognition,sex determination,paternity testing,and home range analysis of endangered wildlife. We also review the application of molecular biological techniques to the dispersal ecology of endangered wildlife.
The application of molecular biological technique to wildlife conservation and management is increasing. In this article,we summarize the application of microsatellite DNA in individual recognition,sex determination,paternity testing,and home range analysis of endangered wildlife. We also review the application of molecular biological techniques to the dispersal ecology of endangered wildlife.
引文
[1]刘旭.基于分子生物学的岩羊个体迁移扩散研究[D].上海:华东师范大学,2014.
[2]ALBAUGH G P,IYENGAR V,LOHANI A,et al.Isolation of exfoliated colonic epithelial cells,a novel,non-invasive approach to the study of cellular markers[J].International Journal of Cancer,1992,52(3):347-350.
[3]雷润华.普氏原羚的社群结构和保护遗传学研究[D].北京:中国科学院,2002.
[4]WASSER S K,HOUSTON C S,KOEHLER G M,et al.Techniques for application of faecal DNA methods to field studies of Ursids[J].Molecular Ecology,1997,6(11):1091-1097.
[5]REED J Z,TOLLIT D J,THOMPSON P M,et al.Molecular scatology:the use of molecular genetic analysis to assign species,sex and individual identity to seal faeces[J].Molecular Ecology,1997,6(3):225-234.
[6]方盛国,丁朝武,冯文和,等.大熊猫DNA指纹分析材料的初步研究[J].兽类学报,1996,16(3):166-170;236
[7]张保卫.大熊猫(Ailuropoda melanoleuca)遗传多样性、种群遗传结构和种群历史研究[D].北京:中国科学院,2005.
[8]GILMORE S,PEAKALL R,ROBERTSON J.Short tandem repeat(STR)DNA markers are hypervariable and informative in Cannabis sativa:implications for forensic investigations[J].Forensic Science International,2003,131(1):65-74.
[9]张云武,张亚平.微卫星及其应用[J].动物学研究,2001,22(4):315-320.
[10]MOORE S S,SERGEANT L L.The conservation of dinulceotide microsacellites among mammalian genomics allows use of heterologous PCR primer pairs in closely related species[J].Genomics,1991,10:654-660.
[11]曾岩,蒋志刚,韩更新.偶蹄类动物的遗传多样性研究与技术比较[J].兽类学报,2000,20(3):217-224.
[12]FRANKHAM R,BALLOU J D,BRISCOE D A.Introduction to conservation genetics[M].New York:Cambridge University Press,2002.
[13]WAN Q H,WU H,FUJIHRA T,et al.Which genetic marker for which conservation genetics issue[J].Electrophoresis,2004,25(14):2165-2176.
[14]JONES A G,ARDREN W R.Methods of parentage analysis in natural populations[J].Molecular Ecology,2003,12(10):2511-2523.
[15]AMAVET P,ROSSO E,MARKARIANI R,et al.Microsatellite DNA markers applied to detection of multiple paternity in Caiman latirostris in Santa Fe,Argentina[J].Journal of Experimental Zoology Part A:Ecological Genetics and Physiology,2008,309A(10):637-642.
[16]张于光.应用微卫星DNA标记进行东北虎亲子鉴定和遗传多样性研究[D].长沙:湖南农业大学,2002.
[17]张亚平,王文,宿兵,等.大熊猫微卫星DNA的筛选及其应用[J].动物学研究,1995,16(4):301-306.
[18]WOOLNOUGH A,DU TOIT J.Vertical zonation of browse quality in tree canopies exposed to a size-structured guild of African browsing ungulates[J].Oecologia,2001,129(4):585-590.
[19]BRASHARE J,ARCESE P.Scent marking in a territory ownership in the oribi and the attributes of multimale groups[J].Animal Behavior,1999,57:61-71.
[20]CEDERLUND G N,OKARMA H.Home range and habitat use of adult female moose[J].The Journal of Wildlife Management,1988,52(2):336-343.
[21]TABERLET P,CAMARRA J J,GRIFFIN S,et al.Noninvasive genetic tracking of the endangered Pyrenean brown bear population[J].Molecular Ecology,1997,6(9):869-876.
[22]KOHN M H,YORK E C,KAMRADT D A,et al.Estimating population size by genotyping faeces[J].Proceedings of the Royal Society B:Biological Sciences,1999,266(1420):657-663.
[23]SMITH D A,RALLS K,HURT A,et al.Assessing reliability of microsatellite genotypes from kit fox faecal samples using genetic and GIS analyses[J].Molecular Ecology,2006,15(2):387-406.
[24]肖治术,张知彬.小议生物扩散[J].生物学通报,2006,41(7):27-28.
[25]DUNNING J B,STEWART D J,DANIELSON B J,et al.Spatially explicit population models:current forms and future uses[J].Ecological Applications,1995,5(1):3-11.
[26]HANSKI I.Metapopulation ecology[M].Oxford:Oxford University Press,1999.
[27]CLOBERT J,DANCHIN E,DHONDT A A,et al.Dispersal[M].Oxford:Oxford University Press,2001.
[28]SWENSON J E,SANDEGREN F,SDERBERG A.Geographic expansion of an increasing brown bear population:evidence for presaturation dispersal[J].Journal of Animal Ecology,1998,67(5):819-826.
[29]PERRIN N,GOUDET J.Inbreeding,kinship,and the evolution of natal dispersal[M]//Dispersal.Oxford:Oxford University Press,2001:123-142.
[30]MCLELLAN B N,HOVEY F W.Natal dispersal of grizzly bears[J].Canadian Journal of Zoology,2001,79(5):838-844.
[31]HEDRICK P W.Gene flow and genetic restoration:the Florida panther as a case study[J].Conservation Biology,1995,9(5):996-1007.
[32]PAETKAU D,WAITS L P,CLARKSON P L.Variation in genetic diversity across the range of North American brown bear[J].Conservation Biology,1998,12(2),418-429.
[33]HAMMOND R L,HANDLEY L J L,WINNEY B J,et al.Metapopulation biology:ecology,genetics and evolution[M].San Diego:Academic Press,2006.
[34]詹祥江.利用非损伤性遗传取样研究大熊猫的种群数量和扩散模式[D].北京:中国科学院,2006.
[35]NEWTON.The speciation and biogeography of birds[M].London:Academic Press,2003:471-507.
[36]WASER P M,STROBECK C.Genetic signatures of interpopulation dispersal[J].Trends in Ecology&Evolution,1998,13(2):43-44.
[37]DOBSON F S.Measures of gene flow in the Columbian ground squirrel[J].Oecologia,1994,100(1/2):190-195..
[38]HORN P L,RAFALSKI J A,WHITEHEAD P J.Molecular genetic(RAPD)analysis of breeding magpie geese[J].The Auk,1996,113(3):552-557.
[39]KENDALL W L,NICHOLS J D.On the estimation of dispersal and movement of birds[J].The Condor,2004,106(4):720-731.
[40]POWELL,LARKIN A.A multistate capture-recapture model using a posteriori classification to enhance estimation of movement rates[J].The Condor,2004,106(4):761-767.
[41]刘阳,张正旺.鸟类的扩散行为研究进展[J].生态学报,2008,28(4):1354-1365.
[42]GOUDET J,PERRIN N,WASER P.Tests for sex-biased dispersal using bi-parentally inherited genetic markers[J].Molecular Ecology,2002,11(6):1103-1114.
[2]ALBAUGH G P,IYENGAR V,LOHANI A,et al.Isolation of exfoliated colonic epithelial cells,a novel,non-invasive approach to the study of cellular markers[J].International Journal of Cancer,1992,52(3):347-350.
[3]雷润华.普氏原羚的社群结构和保护遗传学研究[D].北京:中国科学院,2002.
[4]WASSER S K,HOUSTON C S,KOEHLER G M,et al.Techniques for application of faecal DNA methods to field studies of Ursids[J].Molecular Ecology,1997,6(11):1091-1097.
[5]REED J Z,TOLLIT D J,THOMPSON P M,et al.Molecular scatology:the use of molecular genetic analysis to assign species,sex and individual identity to seal faeces[J].Molecular Ecology,1997,6(3):225-234.
[6]方盛国,丁朝武,冯文和,等.大熊猫DNA指纹分析材料的初步研究[J].兽类学报,1996,16(3):166-170;236
[7]张保卫.大熊猫(Ailuropoda melanoleuca)遗传多样性、种群遗传结构和种群历史研究[D].北京:中国科学院,2005.
[8]GILMORE S,PEAKALL R,ROBERTSON J.Short tandem repeat(STR)DNA markers are hypervariable and informative in Cannabis sativa:implications for forensic investigations[J].Forensic Science International,2003,131(1):65-74.
[9]张云武,张亚平.微卫星及其应用[J].动物学研究,2001,22(4):315-320.
[10]MOORE S S,SERGEANT L L.The conservation of dinulceotide microsacellites among mammalian genomics allows use of heterologous PCR primer pairs in closely related species[J].Genomics,1991,10:654-660.
[11]曾岩,蒋志刚,韩更新.偶蹄类动物的遗传多样性研究与技术比较[J].兽类学报,2000,20(3):217-224.
[12]FRANKHAM R,BALLOU J D,BRISCOE D A.Introduction to conservation genetics[M].New York:Cambridge University Press,2002.
[13]WAN Q H,WU H,FUJIHRA T,et al.Which genetic marker for which conservation genetics issue[J].Electrophoresis,2004,25(14):2165-2176.
[14]JONES A G,ARDREN W R.Methods of parentage analysis in natural populations[J].Molecular Ecology,2003,12(10):2511-2523.
[15]AMAVET P,ROSSO E,MARKARIANI R,et al.Microsatellite DNA markers applied to detection of multiple paternity in Caiman latirostris in Santa Fe,Argentina[J].Journal of Experimental Zoology Part A:Ecological Genetics and Physiology,2008,309A(10):637-642.
[16]张于光.应用微卫星DNA标记进行东北虎亲子鉴定和遗传多样性研究[D].长沙:湖南农业大学,2002.
[17]张亚平,王文,宿兵,等.大熊猫微卫星DNA的筛选及其应用[J].动物学研究,1995,16(4):301-306.
[18]WOOLNOUGH A,DU TOIT J.Vertical zonation of browse quality in tree canopies exposed to a size-structured guild of African browsing ungulates[J].Oecologia,2001,129(4):585-590.
[19]BRASHARE J,ARCESE P.Scent marking in a territory ownership in the oribi and the attributes of multimale groups[J].Animal Behavior,1999,57:61-71.
[20]CEDERLUND G N,OKARMA H.Home range and habitat use of adult female moose[J].The Journal of Wildlife Management,1988,52(2):336-343.
[21]TABERLET P,CAMARRA J J,GRIFFIN S,et al.Noninvasive genetic tracking of the endangered Pyrenean brown bear population[J].Molecular Ecology,1997,6(9):869-876.
[22]KOHN M H,YORK E C,KAMRADT D A,et al.Estimating population size by genotyping faeces[J].Proceedings of the Royal Society B:Biological Sciences,1999,266(1420):657-663.
[23]SMITH D A,RALLS K,HURT A,et al.Assessing reliability of microsatellite genotypes from kit fox faecal samples using genetic and GIS analyses[J].Molecular Ecology,2006,15(2):387-406.
[24]肖治术,张知彬.小议生物扩散[J].生物学通报,2006,41(7):27-28.
[25]DUNNING J B,STEWART D J,DANIELSON B J,et al.Spatially explicit population models:current forms and future uses[J].Ecological Applications,1995,5(1):3-11.
[26]HANSKI I.Metapopulation ecology[M].Oxford:Oxford University Press,1999.
[27]CLOBERT J,DANCHIN E,DHONDT A A,et al.Dispersal[M].Oxford:Oxford University Press,2001.
[28]SWENSON J E,SANDEGREN F,SDERBERG A.Geographic expansion of an increasing brown bear population:evidence for presaturation dispersal[J].Journal of Animal Ecology,1998,67(5):819-826.
[29]PERRIN N,GOUDET J.Inbreeding,kinship,and the evolution of natal dispersal[M]//Dispersal.Oxford:Oxford University Press,2001:123-142.
[30]MCLELLAN B N,HOVEY F W.Natal dispersal of grizzly bears[J].Canadian Journal of Zoology,2001,79(5):838-844.
[31]HEDRICK P W.Gene flow and genetic restoration:the Florida panther as a case study[J].Conservation Biology,1995,9(5):996-1007.
[32]PAETKAU D,WAITS L P,CLARKSON P L.Variation in genetic diversity across the range of North American brown bear[J].Conservation Biology,1998,12(2),418-429.
[33]HAMMOND R L,HANDLEY L J L,WINNEY B J,et al.Metapopulation biology:ecology,genetics and evolution[M].San Diego:Academic Press,2006.
[34]詹祥江.利用非损伤性遗传取样研究大熊猫的种群数量和扩散模式[D].北京:中国科学院,2006.
[35]NEWTON.The speciation and biogeography of birds[M].London:Academic Press,2003:471-507.
[36]WASER P M,STROBECK C.Genetic signatures of interpopulation dispersal[J].Trends in Ecology&Evolution,1998,13(2):43-44.
[37]DOBSON F S.Measures of gene flow in the Columbian ground squirrel[J].Oecologia,1994,100(1/2):190-195..
[38]HORN P L,RAFALSKI J A,WHITEHEAD P J.Molecular genetic(RAPD)analysis of breeding magpie geese[J].The Auk,1996,113(3):552-557.
[39]KENDALL W L,NICHOLS J D.On the estimation of dispersal and movement of birds[J].The Condor,2004,106(4):720-731.
[40]POWELL,LARKIN A.A multistate capture-recapture model using a posteriori classification to enhance estimation of movement rates[J].The Condor,2004,106(4):761-767.
[41]刘阳,张正旺.鸟类的扩散行为研究进展[J].生态学报,2008,28(4):1354-1365.
[42]GOUDET J,PERRIN N,WASER P.Tests for sex-biased dispersal using bi-parentally inherited genetic markers[J].Molecular Ecology,2002,11(6):1103-1114.