基于Web of Science研究丛枝菌根真菌(AMF)态势分析
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摘要
为了探究丛枝菌根真菌(AMF)研究的热点与趋势,本研究基于Web of Science数据库,采用文献计量学方法,对世界上研究最前沿的研究机构、研究作者、文献语种、学术期刊、学科和国家进行了文献计量学统计,进而分析AMF研究概况和动态,旨在为相关科研人员提供一定的数据参考。结果显示:2008—2017年AMF研究论文数量共7109篇;文献产出量逐年增加,2016年文献数量最高;美国、中国、德国、印度、西班牙文献数量居世界前5位,美国文献数量最多,为1262篇;文献语种几乎都为英语,数量为6914篇;中国科学院、西班牙科学院、柏林自由大学、西澳大利亚大学、都灵大学发表的AMF文献数量居世界前5位;发表AMF研究成果的主要核心期刊是《Mycorrhiza》、《Soil Biology Biochemistry》、《Plant and Soil》、《New Phytologist》、《Applied Soil Ecology》;主要学科是农学、植物学、生态环境科学、微生物学和真菌学等相关学科。综合来看,美国、中国以及德国在AMF研究领域处于优势地位。
To study the research hotspots and trends of arbuscular mycorrhizal fungi(AMF), based on the Web of Science database, we analyzed the research institutes, authors, literature languages, academy journals,disciplines and countries by using bibliometrics, then studied the general situation and dynamics of AMF,aiming to provide some data reference for the relevant researchers. The results indicated that: 7109 AMF published articles(2008-2017) were identified, the quantities of literature output was increasing year by year,and 2016 was the highest; the quantities of literatures of the United States, China, Germany, India and Spain ranked the top 5 in the world, and the United States had the most literatures(1262); almost all the literatures were English with the quantities of 6914; the quantities of AMF articles published by the Chinese Academy of Sciences, the Spanish Academy of Sciences, the Free University of Berlin, the University of Western Australia and the University of Turin ranked the top 5; the main core journals that published the AMF research were Mycorrhiza, Soil Biology Biochemistry, Plant And Soil, New Phytologist, Applied Soil Ecology; the main subjects were agronomy, botany, ecological environment science, microbiology and mycology and so on. In general, the United States, China and Germany are in dominant position in the field of AMF research.
To study the research hotspots and trends of arbuscular mycorrhizal fungi(AMF), based on the Web of Science database, we analyzed the research institutes, authors, literature languages, academy journals,disciplines and countries by using bibliometrics, then studied the general situation and dynamics of AMF,aiming to provide some data reference for the relevant researchers. The results indicated that: 7109 AMF published articles(2008-2017) were identified, the quantities of literature output was increasing year by year,and 2016 was the highest; the quantities of literatures of the United States, China, Germany, India and Spain ranked the top 5 in the world, and the United States had the most literatures(1262); almost all the literatures were English with the quantities of 6914; the quantities of AMF articles published by the Chinese Academy of Sciences, the Spanish Academy of Sciences, the Free University of Berlin, the University of Western Australia and the University of Turin ranked the top 5; the main core journals that published the AMF research were Mycorrhiza, Soil Biology Biochemistry, Plant And Soil, New Phytologist, Applied Soil Ecology; the main subjects were agronomy, botany, ecological environment science, microbiology and mycology and so on. In general, the United States, China and Germany are in dominant position in the field of AMF research.
引文
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[8] Majewska M, Rola L K, Zubek S. The growth and phosphorus acquisition of invasive plants Rudbeckia laciniata and Solidago gigantea are enhanced by arbuscular mycorrhizal fungi[J].Mycorrhiza,2017,27(2):83-94.
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[15] Jansa J, Erb A, Oberholzer H R, et al. Soil and geography are more important determinants of indigenous arbuscular mycorrhizal communities than management practices in Swiss agricultural soils[J].Molecular Ecology,2014,23(8):2118-2135.
[16] Hoeksema J D, Chaudhary V B, Gehring C A, et al. A meta-analysis of context-dependency in plant response to inoculation with mycorrhizal fungi[J].Ecology Letters,2010,13(3):394-407.
[17] Krueger M, Krueger C, Walker C, et al. Phylogenetic reference data for systematics and phylotaxonomy of arbuscular mycorrhizal fungi from phylum to species level[J].New Phytologist,2012,193(4):970-984.
[18] Jones R T, Robeson M S, Lauber C L, et al. A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses[J].Isme Journal,2009,3(4):442-453.
[19]林丽华,余加林,刘官信.大蒜素对铜绿假单胞菌生物膜形成的影响及结构定量化分析[J].中国微生态学杂志,2012(01):22-26.
[20]陆洲,秦向阳,李奇峰,等.定量化分析支持下全国耕作制度区划方法预研究[J].中国农学通报,2013(05):86-91.
[21] Lee S H, Ka J O, Cho J C. Members of the phylum Acidobacteria are dominant and metabolically active in rhizosphere soil[J].Fems Microbiology Letters,2008,285(2):263-269.
[22]吴同亮,王玉军,陈怀满,等.基于文献计量学分析2016年环境土壤学研究热点[J].农业环境科学学报,2017(02):205-215.
[23]周鹏举,路文如.食品安全文献计量学分析[J].中国农学通报,2010(13):79-89.
[24]马琨,陶媛,杜茜,等.不同土壤类型下AM真菌分布多样性及与土壤因子的关系[J].中国生态农业学报,2011(01):1-7.
[25]李雅,刘梅,曾全超,等.基于文献计量的土壤有机碳与土壤微生物多样性研究前沿态势分析[J].土壤通报,2017(03):745-756.
[26]刘婧.文献作者分布规律研究——对近十五年来国内洛特卡定律、普赖斯定律研究成果综述[J].情报科学,2004,(01):123-128.
[27] Feng G, Zhang F S, Li X L, et al. Improved tolerance of maize plants to salt stress by arbuscular mycorrhiza is related to higher accumulation of soluble sugars in roots[J].Mycorrhiza,2002,12(4):185-90.
[28] Parniske M. Arbuscular mycorrhiza:the mother of plant root endosymbioses[J].Nature Reviews Microbiology,2008,6(10):763-775.
[29] Shennan C. Biotic interactions, ecological knowledge and agriculture[J].Philosophical Transactions of the Royal Society BBiological Sciences,2008,363(1492):717-739.
[30] Turner B L II, Lambin E F, Reenberg A. The emergence of land change science for global environmental change and sustainability[J].Proceedings Of the National Academy of Sciences Of the United States Of America,2007,104(52):20666-20671.
[31]邱均平.信息计量学(八)第八讲文献信息统计分析方法及应用[J].情报理论与实践,2001(02):156-159.
[32]闫惠红,肖仙桃,孙成权.从文献计量分析看国际及中国农业科学发展态势[J].图书与情报,2004(02):29-31.
[33] Mukherjee A, Ane J M. Germinating Spore Exudates from Arbuscular Mycorrhizal Fungi:Molecular and Developmental Responses in Plants and Their Regulation by Ethylene[J].Molecular Plant-Microbe Interactions,2011,24(2):260-270.
[34] Fellbaum C R, Gachomo E W, Beesetty Y, et al. Carbon availability triggers fungal nitrogen uptake and transport in arbuscular mycorrhizal symbiosis[J].Proceedings Of the National Academy of Sciences of the United States of America,2012,109(7):2666-2671.
[35] Kivlin S N, Hawkes C V, Treseder K K. Global diversity and distribution of arbuscular mycorrhizal fungi[J].Soil Biology&Biochemistry,2011,43(11):2294-2303.
[36] Smith F A, Grace E J, Smith S E. More than a carbon economy:nutrient trade and ecological sustainability in facultative arbuscular mycorrhizal symbioses[J].New Phytologist,2009,182(2):347-358.
[37] Brundrett M. Diversity and classification of mycorrhizal associations[J].Biological reviews of the Cambridge Philosophical Society,2004,79(3):473-95.
[38]刘璇,宋福强,齐丹丹,等.紫穗槐AfUGPase基因的生物信息学分析[J].中国农学通报,2015,31(31):187-193.
[39] Oepik M, Metsis M, Daniell T J, et al. Large-scale parallel 454sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest[J].New Phytologist,2009,184(2):424-437.
[40] Smith S E, Smith F A. Roles of Arbuscular Mycorrhizas in Plant Nutrition and Growth:New Paradigms from Cellular to Ecosystem Scales[J].Annual Review of Plant Biology,2011,62:227-250.
[2] Bissonnette L, St-Arnaud M, Labrecque M. Phytoextraction of heavy metals by two Salicaceae clones in symbiosis with arbuscular mycorrhizal fungi during the second year of a field trial[J].Plant And Soil,2010,332(1/2):55-67.
[3] Dickie I A, FitzJohn R G. Using terminal restriction fragment length polymorphism(T-RFLP)to identify mycorrhizal fungi:a methods review[J].Mycorrhiza,2007,17(4):259-270.
[4] Van der Heijden M G A, Scheublin T R. Functional traits in mycorrhizal ecology:their use for predicting the impact of arbuscular mycorrhizal fungal communities on plant growth and ecosystem functioning[J].New Phytologist,2007,174(2):244-250.
[5] Sikes B A, Cottenie K, Klironomos J N. Plant and fungal identity determines pathogen protection of plant roots by arbuscular mycorrhizas[J].Journal Of Ecology,2009,97(6):1274-1280.
[6] Wang B, Yeun L H, Xue J Y, et al. Presence of three mycorrhizal genes in the common ancestor of land plants suggests a key role of mycorrhizas in the colonization of land by plants[J].New Phytologist,2010,186(2):514-525.
[7] Gianinazzi S, Gollotte A, Binet M N, et al. Agroecology:the key role of arbuscular mycorrhizas in ecosystem services[J].Mycorrhiza,2010,20(8):519-530.
[8] Majewska M, Rola L K, Zubek S. The growth and phosphorus acquisition of invasive plants Rudbeckia laciniata and Solidago gigantea are enhanced by arbuscular mycorrhizal fungi[J].Mycorrhiza,2017,27(2):83-94.
[9] Song F, Qi D, Liu X, et al. Proteomic analysis of symbiotic proteins of Glomus mosseae and Amorpha fruticosa[J]. Scientific Reports,2015, 5:18031.
[10] Artursson V, Finlay R D, Jansson J K. Interactions between arbuscular mycorrhizal fungi and bacteria and their potential for stimulating plant growth[J].Environmental microbiology,2006,8(1):1-10.
[11] Toljander J F, Santos-Gonzalez J C, Anders T, et al. Community analysis of arbuscular mycorrhizal fungi and bacteria in the maize mycorrhizosphere in a long-term fertilization trial[J].Fems Microbiology Ecology,2008,65(2):323-338.
[12] Bardgett R D, van der Putten W H. Belowground biodiversity and ecosystem functioning[J].Nature,2014,515(7528):505-511.
[13] Akiyama K, Matsuzaki K-i, Hayashi H. Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi[J].Nature,2005,435(7043):824-827.
[14] Oehl F, Sieverding E, Ineichen K, et al. Impact of land use intensity on the species diversity of arbuscular mycorrhizal fungi in agroecosystems of Central Europe[J].Applied and environmental microbiology,2003,69(5):2816-24.
[15] Jansa J, Erb A, Oberholzer H R, et al. Soil and geography are more important determinants of indigenous arbuscular mycorrhizal communities than management practices in Swiss agricultural soils[J].Molecular Ecology,2014,23(8):2118-2135.
[16] Hoeksema J D, Chaudhary V B, Gehring C A, et al. A meta-analysis of context-dependency in plant response to inoculation with mycorrhizal fungi[J].Ecology Letters,2010,13(3):394-407.
[17] Krueger M, Krueger C, Walker C, et al. Phylogenetic reference data for systematics and phylotaxonomy of arbuscular mycorrhizal fungi from phylum to species level[J].New Phytologist,2012,193(4):970-984.
[18] Jones R T, Robeson M S, Lauber C L, et al. A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses[J].Isme Journal,2009,3(4):442-453.
[19]林丽华,余加林,刘官信.大蒜素对铜绿假单胞菌生物膜形成的影响及结构定量化分析[J].中国微生态学杂志,2012(01):22-26.
[20]陆洲,秦向阳,李奇峰,等.定量化分析支持下全国耕作制度区划方法预研究[J].中国农学通报,2013(05):86-91.
[21] Lee S H, Ka J O, Cho J C. Members of the phylum Acidobacteria are dominant and metabolically active in rhizosphere soil[J].Fems Microbiology Letters,2008,285(2):263-269.
[22]吴同亮,王玉军,陈怀满,等.基于文献计量学分析2016年环境土壤学研究热点[J].农业环境科学学报,2017(02):205-215.
[23]周鹏举,路文如.食品安全文献计量学分析[J].中国农学通报,2010(13):79-89.
[24]马琨,陶媛,杜茜,等.不同土壤类型下AM真菌分布多样性及与土壤因子的关系[J].中国生态农业学报,2011(01):1-7.
[25]李雅,刘梅,曾全超,等.基于文献计量的土壤有机碳与土壤微生物多样性研究前沿态势分析[J].土壤通报,2017(03):745-756.
[26]刘婧.文献作者分布规律研究——对近十五年来国内洛特卡定律、普赖斯定律研究成果综述[J].情报科学,2004,(01):123-128.
[27] Feng G, Zhang F S, Li X L, et al. Improved tolerance of maize plants to salt stress by arbuscular mycorrhiza is related to higher accumulation of soluble sugars in roots[J].Mycorrhiza,2002,12(4):185-90.
[28] Parniske M. Arbuscular mycorrhiza:the mother of plant root endosymbioses[J].Nature Reviews Microbiology,2008,6(10):763-775.
[29] Shennan C. Biotic interactions, ecological knowledge and agriculture[J].Philosophical Transactions of the Royal Society BBiological Sciences,2008,363(1492):717-739.
[30] Turner B L II, Lambin E F, Reenberg A. The emergence of land change science for global environmental change and sustainability[J].Proceedings Of the National Academy of Sciences Of the United States Of America,2007,104(52):20666-20671.
[31]邱均平.信息计量学(八)第八讲文献信息统计分析方法及应用[J].情报理论与实践,2001(02):156-159.
[32]闫惠红,肖仙桃,孙成权.从文献计量分析看国际及中国农业科学发展态势[J].图书与情报,2004(02):29-31.
[33] Mukherjee A, Ane J M. Germinating Spore Exudates from Arbuscular Mycorrhizal Fungi:Molecular and Developmental Responses in Plants and Their Regulation by Ethylene[J].Molecular Plant-Microbe Interactions,2011,24(2):260-270.
[34] Fellbaum C R, Gachomo E W, Beesetty Y, et al. Carbon availability triggers fungal nitrogen uptake and transport in arbuscular mycorrhizal symbiosis[J].Proceedings Of the National Academy of Sciences of the United States of America,2012,109(7):2666-2671.
[35] Kivlin S N, Hawkes C V, Treseder K K. Global diversity and distribution of arbuscular mycorrhizal fungi[J].Soil Biology&Biochemistry,2011,43(11):2294-2303.
[36] Smith F A, Grace E J, Smith S E. More than a carbon economy:nutrient trade and ecological sustainability in facultative arbuscular mycorrhizal symbioses[J].New Phytologist,2009,182(2):347-358.
[37] Brundrett M. Diversity and classification of mycorrhizal associations[J].Biological reviews of the Cambridge Philosophical Society,2004,79(3):473-95.
[38]刘璇,宋福强,齐丹丹,等.紫穗槐AfUGPase基因的生物信息学分析[J].中国农学通报,2015,31(31):187-193.
[39] Oepik M, Metsis M, Daniell T J, et al. Large-scale parallel 454sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest[J].New Phytologist,2009,184(2):424-437.
[40] Smith S E, Smith F A. Roles of Arbuscular Mycorrhizas in Plant Nutrition and Growth:New Paradigms from Cellular to Ecosystem Scales[J].Annual Review of Plant Biology,2011,62:227-250.