A comparative study of assembly and disassembly process of dimeric and monomeric cyanine dyes with DNA templates
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  • 英文篇名:A comparative study of assembly and disassembly process of dimeric and monomeric cyanine dyes with DNA templates
  • 作者:Lijia ; Yu ; Qianfan ; Yang ; Yalin ; Tang
  • 英文作者:Lijia Yu;Qianfan Yang;Yalin Tang;National Center of Occupational Safety and Health,State Administration of Work Safety;College of Chemistry, Sichuan University;Beijing National Laboratory for Molecular Science, Center for Molecular Science, State Key Laboratory for Structural Chemistry for Unstable and State Species, Institute of Chemistry, Chinese Academy of Sciences;
  • 英文关键词:Cyanine dye;;Supramolecular assembly;;DNA templates;;G-quadruplex;;c-myc
  • 中文刊名:FXKB
  • 英文刊名:中国化学快报(英文版)
  • 机构:National Center of Occupational Safety and Health,State Administration of Work Safety;College of Chemistry, Sichuan University;Beijing National Laboratory for Molecular Science, Center for Molecular Science, State Key Laboratory for Structural Chemistry for Unstable and State Species, Institute of Chemistry, Chinese Academy of Sciences;
  • 出版日期:2019-03-15
  • 出版单位:Chinese Chemical Letters
  • 年:2019
  • 期:v.30
  • 基金:financially supported by General Program of the National Natural Science Foundation of China(Nos. 21472197. 21675126 and 21778058);; "Science and Technology Service Network Initiative" of the Chinese Academy of Sciences
  • 语种:英文;
  • 页:FXKB201903036
  • 页数:4
  • CN:03
  • ISSN:11-2710/O6
  • 分类号:182-185
摘要
Cyanine dyes have attracted more and more interest due to their controllable assembly and disassembly process with biomolecular templates. The self-assembly of cyanine dye not only depend on the environment, but also on their structures. Here, we report assembly and disassembly of two cyanine dyes,a dimeric cyaine dye(TC-P4) and its corresponding monomer(TC). In PBS, these dyes could form aggregates. The parallel c-myc G-quadruplex as a template causes the transformation of TC-P4 from Haggregates to dimer and monomer; while duplex and single-stranded DNAs could not. The interaction between these DNAs motifs and TC could all induce the appearance of monomer band. Parallel c-myc Gquadruplex could enhance the fluorescence intensity of TC-P4 and TC. The self-assembly and disassembly of TC and TC-P4 could be regulated and used as probes for G-quadruplex recognition from duplex and single-stranded DNAs in solution.
        Cyanine dyes have attracted more and more interest due to their controllable assembly and disassembly process with biomolecular templates. The self-assembly of cyanine dye not only depend on the environment, but also on their structures. Here, we report assembly and disassembly of two cyanine dyes,a dimeric cyaine dye(TC-P4) and its corresponding monomer(TC). In PBS, these dyes could form aggregates. The parallel c-myc G-quadruplex as a template causes the transformation of TC-P4 from Haggregates to dimer and monomer; while duplex and single-stranded DNAs could not. The interaction between these DNAs motifs and TC could all induce the appearance of monomer band. Parallel c-myc Gquadruplex could enhance the fluorescence intensity of TC-P4 and TC. The self-assembly and disassembly of TC and TC-P4 could be regulated and used as probes for G-quadruplex recognition from duplex and single-stranded DNAs in solution.
引文
[1]A. Lohr, M. Lysetska, F. Wiirthner, Angew. Chem. Int. Ed. 44(2005)5071-5074.
    [2]L.X. Wang, J.F.Xiang, H.X.Sun, et al., Dye Pigm. 122(2015)382-388.
    [3]D. Wu, Y. Shen, J. Chen, et al., Chin. Chem. Lett. 28(2017)1979-1982.
    [4]J.L.Seifert, R.E. Connor, S.A. Kushon, et al., J. Am. Chem. Soc. 121(1999)2987-2995.
    [5]P.H. Doan, D.R.G. Pitter, A. Kocher, et al., J. Am. Chem. Soc. 137(2015)9198-9201.
    [6]L.J.Yu, W. Gai, Q.F.Yang, et al., Chin. Chem. Lett. 26(2015)705-708.
    [7]Y. Xu, H. Sugiyama, Nucleic Acids Res. 34(2006)949-954.
    [8]J.R. Williamson, M.K. Raghuraman, T.R. Cech, Cell 59(1989)871-880.
    [9]S. Burge, G.N. Parkinson, P. Hazel, et al.,Nucleic Acids Res. 34(2006)5402-5415.
    [10]H.J. Lipps, D. Rhodes, Trends Cell Biol. 19(2009)414-422.
    [11]Y.H. Shi, H.X. Sun, J.F. Xiang, et al., Chem. Commun. 52(2016)7302-7305.
    [12]H.B. Chen, X.F. Zhang, H.X. Sun, et al., Analyst 140(2015)7170-7174.
    [13]Y.P.Kumar,S.Bhowmik,N.Das Rabindra,Chem.Eur.J. 19(2013)11502-11506.
    [14]K. Iida, S. Majima, T. Nakamura, et al., Molecules 18(2013)4328-4341.
    [15]L.J. Yu, Q.F. Yang, J.F. Xiang, et al., Anal. Methods 7(2015)5483-5489.
    [16]L.J.Yu, Q.F. Yang, J.F. Xiang, et al.,Analyst 140(2015)1637-1646.
    [17]S. Gadde, K. Batchelor Elizabeth, E. Kaifer Angel, et al., Chem.-Eur.J. 15(2009)6025-6031.
    [18]Q.F. Yang, J.F. Xiang, S. Yang, et al., Chem. Commun.(2009)1103-1105.
    [19]M.J. Ruedas-Rama, A. Orte, M.C. Martin-Domingo, et al.,J. Phys. Chem. B 118(2014)6098-6106.
    [20]J.S. Kim, R. Kodagahally, L.Strekowski, et al., Talanta 67(2005)947-954.
    [21]H. Heiko, Curr. Cancer Drug Targets 3(2003)163-175.
    [22]K. Bergmann, C.T. O'Konski, J. Phys. Chem. 67(1963)2169-2177.
    [23]N. Maizels, Nat. Struct. Mol. Biol. 13(2006)1055-1059.
    [24]D.L. Ma, Z. Zhang, M. Wang, et al.,Chem. Biol. 22(2015)812-828.
    [25]H. Cai, C. Zhou, Q. Yang, et al., Chin. Chem. Lett. 29(2018)531-534.
    [26]B.Jin, X. Zhang, W. Zheng, et al., Anal. Chem. 86(2014)943-952.
    [27]R. Shahid, A. Bugaut, S. Balasubramanian, Biochem 49(2010)8300-8306.

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