一个CRISPR/Cas9-VQR基因编辑系统的构建
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  • 英文篇名:Establishment of a CRISPR/Cas9-VQR gene editing system
  • 作者:陈凯 ; 孙国梁 ; 宋高原 ; 李爱丽 ; 谢传晓 ; 毛龙 ; 耿帅锋
  • 英文作者:CHEN Kai;SUN Guo-Liang;SONG Gao-Yuan;LI Ai-Li;XIE Chuan-Xiao;MAO Long;GENG Shuai-Feng;Institute of Crop Sciences, Chinese Academy of Agricultural Sciences;
  • 关键词:CRISPR/Cas9-VQR ; 定点突变 ; PAM ; 基因突变
  • 英文关键词:CRISPR/Cas9-VQR;;site-direct mutagenesis;;PAM;;mutation rate
  • 中文刊名:XBZW
  • 英文刊名:Acta Agronomica Sinica
  • 机构:中国农业科学院作物科学研究所;
  • 出版日期:2019-02-26 14:11
  • 出版单位:作物学报
  • 年:2019
  • 期:v.45
  • 基金:国家转基因生物新品种培育重大专项(2016ZX08009-001)资助~~
  • 语种:中文;
  • 页:XBZW201906006
  • 页数:8
  • CN:06
  • ISSN:11-1809/S
  • 分类号:46-53
摘要
CRISPR/Cas9系统是一种广泛应用于细菌、酵母、动物和植物中的基因组定点编辑技术,但该编辑系统的使用范围受PAM (proto-spacer-motif)位点NGG的限制。本研究通过突变Streptococcus pyogenes Cas9 (SpCas9)编码氨基酸(1135位的天冬氨酸D突变成缬氨酸V, 1335位的精氨酸R突变为谷胱氨酸Q, 1337位的苏氨酸T突变为精氨酸R,命名该突变子为Cas9-VQR)改造其识别PAM为NGA的位点以扩大其使用范围。并使用玉米Ubi启动子启动Cas9-VQR基因、优化SpCas9的密码子、加入保守的核定位信号序列、增加单子叶植物中保守的3′UTR序列和使用水稻U6启动子启动gRNA来修饰该编辑系统。结果表明Cas9-VQR系统能够识别PAM为NGA的位点,并进行有效的切割。体外酶切活性检测结果表明Cas9-VQR的切割效率为5%~70%。水稻转化检测结果表明Cas9-VQR的切割效率约为27.5%~70.5%,平均切割效率为46.23%。本研究拓宽了CRISPR/Cas9系统在作物中的使用范围,特别是NGA PAM位点较高的作物。
        Clustered Regularly Interspaced Short Palindromic Repeat and Cas9(CRISPR/Cas9), a new generation of genomeediting technology, is widely applied among bacteria, yeast, animals and plants, however, the typical CRISRP/Cas9 cannot recognize the NGA proto-spacer-motif(PAM), which limits its application. In order to broaden the applications of CRIPSR/Cas9 system, we modified the Streptococcus pyogenes Cas9(SpCas9) sequence by the PCR site-direct mutagenesis, which encodes V(1135), Q(1335), and R(1337), to make the CRIPSR/Cas9-VQR able to recognize the NGA PAM motif. We also constructed a binary expression vector of CRISRP/Cas9-VQR with maize ubiquitin as the promoter to drive the Cas9-VQR, optimizing SpCas9-codon, adding conserved nuclear localization signal sequence, and increasing the conserved 3' UTR sequence of monocots, and using OsU6 transcripts of sRNA. CRISPR/Cas9-VQR could recognize the NGA motif and cut targeted sequence in vivo. We assembled the Cas9-VQR protein with the s RNAs in vitro. The Cas9-VQR could cleave the targeted fragments with about 5%–70% of mutation efficiency. In the transformation of rice, we detected about 27.50%–70.50% of mutation ratio, with an average of 46.23%. This system broadens the CRISPR/Cas9 applications in crops, especially in these with higher PAM locus of NGA.
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