贝莱斯芽孢杆菌(Bacillus velezensis)物种名称的“前世今生”
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摘要
贝莱斯芽孢杆菌(Bacillus velezensis)是环境中常见的具有广泛功能性的细菌种类,而其分类地位与物种名称的确定却是细菌分类学家一直以来争论的焦点,直到最近贝莱斯芽孢杆菌有效的物种名称才得到确定。采用按时间顺叙的方式对贝莱斯芽孢杆菌物种名称演变发展过程进行系统阐述,以期让读者清晰了解贝莱斯芽孢杆菌物种名称的由来与更迭历程。
Bacillus velezensis is a common functional bacterial species in the environment,and its taxonomic status and species name determination has always been the focus of debate among bacterial taxonomists. Until recently,the effective species name of B. velezensis was determined. In this paper,the evolution process of the species name of B. velezensis is systematically expounded in a time-smooth manner,in order to give readers a clear understanding of the origin and alternation of the species name of B. velezensis.
Bacillus velezensis is a common functional bacterial species in the environment,and its taxonomic status and species name determination has always been the focus of debate among bacterial taxonomists. Until recently,the effective species name of B. velezensis was determined. In this paper,the evolution process of the species name of B. velezensis is systematically expounded in a time-smooth manner,in order to give readers a clear understanding of the origin and alternation of the species name of B. velezensis.
引文
[1]李生樟,陈颖,杨瑞环,等.一株拮抗黄单胞菌的贝莱斯芽孢杆菌的分离和鉴定[J/OL].微生物学报, DOI:10. 13343/j. cnki.wsxb. 20180513.
[2]王金燕,李彬,等.刺参养殖池塘一株贝莱斯芽孢杆菌的分离及其生理特性[J].中国水产科学, 2018, 25(3):567-575.
[3]王青华,孙晓晖,唐旭,等.深海贝莱斯芽孢杆菌DH82的筛选、鉴定及其抗菌粗蛋白性质分析[J].海洋通报, 2019, 1:63-69.
[4]Wang Z, Li P, Luo L, et al. Daqu fermentation selects for heatresistant Enterobacteriaceae and Bacilli[J]. Appl Environ Microbiol, 2018, 84(21):e01483-18.
[5]Rabbee MF, Ali MS, Choi J, et al. Bacillus velezensis:A valuable member of bioactive molecules within plant microbiomes[J].Molecules, 2019, 24(6):1046.
[6]He G, Huang J, Zhou R, et al. Effect of fortified daqu on the microbial community and flavor in chinese strong-flavor liquor brewing process[J]. Front Microbiol, 2019, 10:56.
[7]Fukumoto J. Studies on the production of bacterial amylase.I. Isolation of bacteria secreting potent amylases and their distribution[J]. J Agr Chem Soc Jpn, 1943, 19:487-503.
[8]Priest FG, Goodfellow M, Shute LA, et al. Bacillus amyloliquefaciens sp. nov., nom. rev[J]. Int J Syst Bacteriol, 1987, 37:69-71.
[9]Ruiz-García C, Béjar V, Martínez-Checa F, et al. Bacillus velezensis sp. nov. a surfactant-producing bacterium isolated from the river Vélez in Málaga, southern Spain[J]. Int J Syst Evol Microbiol,2005, 55(1):191-195.
[10]Wang LT, Lee FL, Tai CJ, et al. Bacillus velezensis is a later heterotypic synonym of Bacillus amyloliquefaciens[J]. Int J Syst Evol Microbiol, 2008, 58(3):671-675.
[11]Madhaiyan M, Poonguzhali S, Kwon SW, et al. Bacillus methylotrophicus sp. nov. a methanol-utilizing, plant-growth-promoting bacterium isolated from rice rhizosphere soil[J]. Int J Syst Evol Microbiol, 2010, 60(10):2490-2495.
[12]Borriss R, Chen XH, et al. Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T:a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp.nov. based on complete genome sequence comparisons[J]. Int J Syst Evol Microbiol, 2011, 61(8):1786-801.
[13]Dunlap CA, Kim SJ, Kwon SW, et al. Phylogenomic analysis shows that Bacillus amyloliquefaciens subsp. plantarum is a later heterotypic synonym of Bacillus methylotrophicus[J]. Int J Syst Evol Microbiol, 2015, 65(7):2104-2109.
[14]Dunlap CA, Kim SJ, Kwon SW, et al. Bacillus velezensis is not a later heterotypic synonym of Bacillus amyloliquefaciens;Bacillus methylotrophicus, Bacillus amyloliquefaciens subsp. plantarum and ‘Bacillus oryzicola’ are later heterotypic synonyms of Bacillus velezensis based on phylogenomics[J]. Int J Syst Evol Microbiol,2016, 66(3):1212-1217.
[15]Ye M, Tang X, Yang R, et al. Characteristics and application of a novel species of Bacillus:Bacillus velezensis[J]. ACS Chem Biol, 2018, 13(3):500-505.
[2]王金燕,李彬,等.刺参养殖池塘一株贝莱斯芽孢杆菌的分离及其生理特性[J].中国水产科学, 2018, 25(3):567-575.
[3]王青华,孙晓晖,唐旭,等.深海贝莱斯芽孢杆菌DH82的筛选、鉴定及其抗菌粗蛋白性质分析[J].海洋通报, 2019, 1:63-69.
[4]Wang Z, Li P, Luo L, et al. Daqu fermentation selects for heatresistant Enterobacteriaceae and Bacilli[J]. Appl Environ Microbiol, 2018, 84(21):e01483-18.
[5]Rabbee MF, Ali MS, Choi J, et al. Bacillus velezensis:A valuable member of bioactive molecules within plant microbiomes[J].Molecules, 2019, 24(6):1046.
[6]He G, Huang J, Zhou R, et al. Effect of fortified daqu on the microbial community and flavor in chinese strong-flavor liquor brewing process[J]. Front Microbiol, 2019, 10:56.
[7]Fukumoto J. Studies on the production of bacterial amylase.I. Isolation of bacteria secreting potent amylases and their distribution[J]. J Agr Chem Soc Jpn, 1943, 19:487-503.
[8]Priest FG, Goodfellow M, Shute LA, et al. Bacillus amyloliquefaciens sp. nov., nom. rev[J]. Int J Syst Bacteriol, 1987, 37:69-71.
[9]Ruiz-García C, Béjar V, Martínez-Checa F, et al. Bacillus velezensis sp. nov. a surfactant-producing bacterium isolated from the river Vélez in Málaga, southern Spain[J]. Int J Syst Evol Microbiol,2005, 55(1):191-195.
[10]Wang LT, Lee FL, Tai CJ, et al. Bacillus velezensis is a later heterotypic synonym of Bacillus amyloliquefaciens[J]. Int J Syst Evol Microbiol, 2008, 58(3):671-675.
[11]Madhaiyan M, Poonguzhali S, Kwon SW, et al. Bacillus methylotrophicus sp. nov. a methanol-utilizing, plant-growth-promoting bacterium isolated from rice rhizosphere soil[J]. Int J Syst Evol Microbiol, 2010, 60(10):2490-2495.
[12]Borriss R, Chen XH, et al. Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T:a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp.nov. based on complete genome sequence comparisons[J]. Int J Syst Evol Microbiol, 2011, 61(8):1786-801.
[13]Dunlap CA, Kim SJ, Kwon SW, et al. Phylogenomic analysis shows that Bacillus amyloliquefaciens subsp. plantarum is a later heterotypic synonym of Bacillus methylotrophicus[J]. Int J Syst Evol Microbiol, 2015, 65(7):2104-2109.
[14]Dunlap CA, Kim SJ, Kwon SW, et al. Bacillus velezensis is not a later heterotypic synonym of Bacillus amyloliquefaciens;Bacillus methylotrophicus, Bacillus amyloliquefaciens subsp. plantarum and ‘Bacillus oryzicola’ are later heterotypic synonyms of Bacillus velezensis based on phylogenomics[J]. Int J Syst Evol Microbiol,2016, 66(3):1212-1217.
[15]Ye M, Tang X, Yang R, et al. Characteristics and application of a novel species of Bacillus:Bacillus velezensis[J]. ACS Chem Biol, 2018, 13(3):500-505.