波斯特孔菌属及近缘属的系统发育研究
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摘要
木材腐朽真菌在森林生态系统中起着关键的降解还原作用,是森林生态系统物质循环中不可缺少的重要组成部分。波斯特孔菌属Postia是一类重要的木腐真菌,主要造成木材褐色腐朽。褐腐干酪孔菌属Oligoporu的种类在形态上和波斯特孔菌属相似;通过系统发育研究发现,这些属的种类在系统发育上明显与波斯特孔菌属在不同的分枝。通过描述或转移,波斯特孔菌属记录近60种,然而对波斯特孔菌属及其近缘属较为全面的系统发育研究还未开展。此项研究通过利用ITS、nr LSU及Rpb2的序列,使用最大简约法,最大似然法以及贝叶斯分析法来分析波斯特孔菌属及其近缘属的系统发育关系。此外,通过利用多基因片段ITS、nr LSU、MTSSU、Ppb1、Rpb2、Nussu及Tef 1,使用最大简约法,最大似然法以及贝叶斯分析法来分析波斯特孔菌属内种间的系统发育关系。共研究了527份波斯特孔菌属及其近缘属的标本,成功获取42个种的基因序列,结果表明:广义的波斯特孔菌属主要分为5个分枝,狭义的波斯特孔菌属包括Postia lactea、Postia tephroleuca、Postia lowei、Postia hirsuta、Postia ochraceoalba、Postia amurensis,狭义的褐腐干酪孔菌属包括Oligoporus rennyi和Oligoporus sericeomollis、Osteina属容纳Osteina obducta和Osteina undosa,而Postia caesia complex被确定为一个独立的属Cyanosporus,其余被转移至Spongiporus属或仍然归于广义的波斯特孔菌属,等待未来进一步研究。此外,Pistia属一新种,Cyanosporus六新种,Spongiporus一新种分别被定义描述。
引文
Binder M,Justo A,Riley R,Salamov A,Lopez-Giraldez F,Sj?kvist E,Copeland A,Foster B,Sun H,Larsson E,Larsson KH,Townsend J,Grigoriev IV,Hibbett DS,2013.Phylogenetic and phylogenomic overview of the Polyporales.Mycologia,105:1350-1373.
Buchanan PK,Ryvarden L,2000.An annotated checklist of polypore and polypore-like fungi recorded from New Zealand.New Zealand Journal of Botany 38:265-323.
Cui BK,Li HJ,2012.A new species of Postia(Basidiomycota)from Northeast China.Mycotaxon120:231-237.
Dai YC,2012.Polypore diversity in China with an annotated checklist of Chinese polypores.Mycoscience53:49-80.
Dai YC,Hattori T,2007.Postia japonica(Basidiomycota),a new polypore from Japan.Mycotaxon102:113-118.
Dai YC,Yuan HS,Wang HC,Yang F,Wei YL,2009.Polypores(Basidiomycota)from Qin Mts.in Shaanxi Province,central China.Annales Botanici Fennici 46:54-61.
Fries EM,1874.Hymenomycetes Europaci.Berlingius,Lundae.
Hall TA,1999.Bioedit:a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT.Nucleic Acids Symposium Series 41:95-98
Hattori T,Sotome K,Ota Y,Thi B,Lee S,Salleh B,2010.Postia stellifera sp.nov.,a stipitate and terrestrial polypore from Malaysia.Mycotaxon 114:151-161.
Jülich W,1982.Notes on some Basidiomycetes(Aphyllophorales and Heterobasidiomycetes).Persoonia114:421-428.
Larsen MJ,Lombard FF,1986.New combinations in the genus Postia Fr.(Polyporaceae).Mycotaxon26:271-273.
Li HJ,Cui BK,Dai YC,2014.Taxonomy and multi-gene phylogeny of Datronia(Polyporales,Basidiomycota).Persoonia 32:170-182.
Lowe JL,Lombard FF,1973.On the identity of Polyporus lacteus.Mycologia 65:725-732.
Nylander JAA,2004.Mr Modeltest v2.Program distributed by the author.Evolutionary Biology Centre,Uppsala University,Uppsala.
Ortiz-Santana B,Lindner DL,Miettinen O,Justo A,Hibbett DS,2013.A phylogenetic overview of the antrodia clade(Basidiomycota,Polyporales).Mycologia 105:1391-1411.
Pegler DN,Saunders EM,1994.British poroid species formerly placed in the genus Tyromyces(Coriolaceae).Mycologist 8:24-31.
Petersen JH,1996.Farvekort.The Danish Mycological Society′s colour-chart.Foreningen til Svampekundskabens Fremme,Greve
Rajchenberg M,1987.Xylophilous Aphyllophorales(Basidiomycetes)from the southern Andean forests.Additions and corrections.II.Sydowia 40:235-249.
Renvall P,1992.Basidiomycetes at the timberline in Lapland 4.Postia lateritia n.sp.and its rust-coloured relatives.Karsternia 32:43-60.
Ronquist F,Huelsenbeck JP,2003.MRBAYES 3:bayesian phylogenetic inference under mixed models.Bioinformatics 19:1572-1574.doi:10.1093/bioinformatics/btg180
Ryvarden L,Melo I,2014.Poroid fungi of Europe.Synopsis Fungorum 31:263-291.
Shen LL,Cui BK,Dai YC,2014.A new species of Postia(Polyporales,Basidiomycota)from China based on morphological and molecular evidence.Phytotaxa 162:147-156.
Stamatakis A,2006.RAx ML-VI-HPC:maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.Bioinformatics 22:2688-2690.
Thompson JD,Gibson TJ,Plewniak F,Jeanmougin F,Higgins DG,1997.The Clustal_X windows interface:flexible strategies for multiple sequence alignment aided by quality analysis tools.Nucleic Acids Research25:4876-4882.
Wei YL,Dai YC,2006.Three new species of Postia(Aphyllophorales,Basidiomycota)from China.Fungal Diversity 23:391-402.
Wei YL,Qin WM,2010.Two new species of Postia from China.Sydowia 62:165-170.
White TJ,Bruns T,Lee S,Taylor J,1990.Amplification and direct sequencing of fungal ribosomal RNAgenes for phylogenetics.In:Innis MA,Gelfand DH,Sninsky JJ,White TJ(eds),PCR protocols:a guide to methods and applications.Academic Press,San Diego,pp 315-322.
Yuan HS,Dai YC,Wei YL,2010.Postia cana sp.nov.(Basidiomycota,Polyporales)from Shanxi Province,northern China.Nordic Journal of Botany 28:629-631.
Buchanan PK,Ryvarden L,2000.An annotated checklist of polypore and polypore-like fungi recorded from New Zealand.New Zealand Journal of Botany 38:265-323.
Cui BK,Li HJ,2012.A new species of Postia(Basidiomycota)from Northeast China.Mycotaxon120:231-237.
Dai YC,2012.Polypore diversity in China with an annotated checklist of Chinese polypores.Mycoscience53:49-80.
Dai YC,Hattori T,2007.Postia japonica(Basidiomycota),a new polypore from Japan.Mycotaxon102:113-118.
Dai YC,Yuan HS,Wang HC,Yang F,Wei YL,2009.Polypores(Basidiomycota)from Qin Mts.in Shaanxi Province,central China.Annales Botanici Fennici 46:54-61.
Fries EM,1874.Hymenomycetes Europaci.Berlingius,Lundae.
Hall TA,1999.Bioedit:a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT.Nucleic Acids Symposium Series 41:95-98
Hattori T,Sotome K,Ota Y,Thi B,Lee S,Salleh B,2010.Postia stellifera sp.nov.,a stipitate and terrestrial polypore from Malaysia.Mycotaxon 114:151-161.
Jülich W,1982.Notes on some Basidiomycetes(Aphyllophorales and Heterobasidiomycetes).Persoonia114:421-428.
Larsen MJ,Lombard FF,1986.New combinations in the genus Postia Fr.(Polyporaceae).Mycotaxon26:271-273.
Li HJ,Cui BK,Dai YC,2014.Taxonomy and multi-gene phylogeny of Datronia(Polyporales,Basidiomycota).Persoonia 32:170-182.
Lowe JL,Lombard FF,1973.On the identity of Polyporus lacteus.Mycologia 65:725-732.
Nylander JAA,2004.Mr Modeltest v2.Program distributed by the author.Evolutionary Biology Centre,Uppsala University,Uppsala.
Ortiz-Santana B,Lindner DL,Miettinen O,Justo A,Hibbett DS,2013.A phylogenetic overview of the antrodia clade(Basidiomycota,Polyporales).Mycologia 105:1391-1411.
Pegler DN,Saunders EM,1994.British poroid species formerly placed in the genus Tyromyces(Coriolaceae).Mycologist 8:24-31.
Petersen JH,1996.Farvekort.The Danish Mycological Society′s colour-chart.Foreningen til Svampekundskabens Fremme,Greve
Rajchenberg M,1987.Xylophilous Aphyllophorales(Basidiomycetes)from the southern Andean forests.Additions and corrections.II.Sydowia 40:235-249.
Renvall P,1992.Basidiomycetes at the timberline in Lapland 4.Postia lateritia n.sp.and its rust-coloured relatives.Karsternia 32:43-60.
Ronquist F,Huelsenbeck JP,2003.MRBAYES 3:bayesian phylogenetic inference under mixed models.Bioinformatics 19:1572-1574.doi:10.1093/bioinformatics/btg180
Ryvarden L,Melo I,2014.Poroid fungi of Europe.Synopsis Fungorum 31:263-291.
Shen LL,Cui BK,Dai YC,2014.A new species of Postia(Polyporales,Basidiomycota)from China based on morphological and molecular evidence.Phytotaxa 162:147-156.
Stamatakis A,2006.RAx ML-VI-HPC:maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.Bioinformatics 22:2688-2690.
Thompson JD,Gibson TJ,Plewniak F,Jeanmougin F,Higgins DG,1997.The Clustal_X windows interface:flexible strategies for multiple sequence alignment aided by quality analysis tools.Nucleic Acids Research25:4876-4882.
Wei YL,Dai YC,2006.Three new species of Postia(Aphyllophorales,Basidiomycota)from China.Fungal Diversity 23:391-402.
Wei YL,Qin WM,2010.Two new species of Postia from China.Sydowia 62:165-170.
White TJ,Bruns T,Lee S,Taylor J,1990.Amplification and direct sequencing of fungal ribosomal RNAgenes for phylogenetics.In:Innis MA,Gelfand DH,Sninsky JJ,White TJ(eds),PCR protocols:a guide to methods and applications.Academic Press,San Diego,pp 315-322.
Yuan HS,Dai YC,Wei YL,2010.Postia cana sp.nov.(Basidiomycota,Polyporales)from Shanxi Province,northern China.Nordic Journal of Botany 28:629-631.