绵羊肺腺瘤病相关基因突变的检测及绵羊、山羊内源性反转录病毒的扩增
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摘要
研究背景:绵羊肺腺瘤病(ovine pulmonary adenomatosis, OPA)是一种由绵羊肺腺瘤病病毒(jaagsiekte sheep retrovirus, JSRV)引起的肺脏肿瘤性疾病。病原JSRV为β反转录病毒。自然感染绵羊潜伏期为2~24个月,人工感染绵羊潜伏期为3-7个月,患病绵羊病死率为100%。世界动物卫生组织将该病列为B类传染病。JSRV的Env蛋白是在体内和体外起主要作用的癌蛋白,有研究表明PI3K/AKT和RAS-MEK-MAPK是JSRV Env蛋白转化细胞的信号通路。建立特异、快速诊断方法是本病防控的基础。病毒致病机制的研究是深入了解本病的重点。
     研究目的方法:建立特异性诊断OPA的方法和研究OPA与癌症相关基因突变的关系。本实验在JSRV结构基因研究的基础上参照GenBank中登录的JSRV基因序列,针对编码Env蛋白YXXM基序列设计了特异性PCR引物,建立了PCR检测方法,并对保存的病料进行了检测。参照SANGER、UCSC、GenBank数据库对nras、kras、pik3ca、egfr,p53基因发生突变较高的位点的外显子进行扩增。应用SSCP-PCR技术对扩增产物进行分析,对疑似突变的扩增产物进行测序检测。参照GenBank中登录的enJSRV基因序列,设计三对特异性引物扩增出一株绵羊内源性肺腺瘤反转录病毒和一株山羊内源性肺腺瘤反转录病毒基因片段。以山羊基因组DNA为模板,应用PCR技术扩增山羊内源性病毒基因片段,分别连接PMD-18T载体并测序。利用Methyl Primer Express v1.0查找绵羊和山羊enJSRV启动子区CpG岛,各设计一对甲基化引物和一对非甲基化引物。以处理的绵羊和山羊基因组DNA为模板,检测绵羊胎儿不同组织基因组DNA的甲基化情况,和不同山羊组织基因组DNA甲基化情况。构建含enJSRV的pro、env融合基因的真核表达载体EGFP-enpro、pcDNA3.1-enenv并在小鼠肺上皮细胞系TC-1中表达。
     实验结果:(1)建立的特异性PCR检测方法,具有高的特异性、重复性,可检测出最低10~20拷贝的JSRV前病毒DNA。检测出JSRV阳性样品10例。(2)应用PCR-SSCP检测法,对10例JSRV阳性样品和10例阴性样品进行检测,结果在2例阳性标本中发现kras基因第二外显子第12氨基酸杂合型突变,CDS突变356)T,氨基酸突变G12V。1例阳性样品检测出p53基因第7外显子杂合型突变,CDS突变825T>C,氨基酸未发生突变C275C。(3)完成了一株绵羊内源性肺腺瘤病毒和一株山羊内源性肺腺瘤病毒基因序列的测定和序列分析,结果显示测得的绵羊enJSRVN序列与enJSRV-20(EF680302.1)病毒株的核苷酸同源性为99.4%,与外源性绵羊肺腺瘤病毒JS7(AF357971.1)病毒株的核苷酸同源性为90.9%。测得的山羊GERV序列与内源性绵羊肺腺瘤病毒株enJSRV-5(EF680305.1)的核苷酸同源性为94.2%,与外源性绵羊肺腺瘤病毒株JS-7(AF357971.1)的核苷酸同源性为88.1.%。扩增的绵羊和山羊内源性反转录病毒的同源性为93.1%。对enJSRV基因启动子甲基化检测,结果显示绵羊和山羊不同组织中均存在甲基化与非甲基化修饰的病毒启动子。(4)经过酶切鉴定pro.eNV基因成功连接入真核表达载体pEGFP-C1和pcDNA3.1(+),蛋白免疫荧光和Western BlOt方法检测显示重组质粒、EGFP-enpro、 pcDNA3.1-enenv能够在真核细胞中瞬时表达.
     结论:(1)本研究建立了JSRV的特异性检测方法,对OPA的早期诊断和防控具有实用价值。(2)检测到JSRV感染绵羊肿瘤组织基因组中kras.p53基因突变,对研究OPA的致病机制具有重要参考价值。(3)成功扩增出一株绵羊和一株山羊enJSRV基因序列,检测了绵羊和山羊enJSRV启动子区的甲基化修饰情况。(4)分别构建了包含enJSRV的pro、env基因的真核表达质粒,为研究enJSRV的功能和抑制JSRV感染的作用奠定了基础。
BACKGROUND:Jaagsiekte sheep retrovirus (JSRV) is a type βretrovirus specifically associated with a contagious lung tumor of sheep, ovine pulmonary adenomatosis (OPA).Incubation period of OPA cause in nature is2~24months, incubation period of OPA cause by experiment is3~7months. OPA is the B-type infectious disease according to the disese classification from OIE.The JSRV envelope glycoprotein (Env) functions as a dominant oncoprotein in vitro and in vivo. Several reports suggested that the phosphatidylinositol3-kinase/AKT pathway and RAS-MEK-MAPK pathway are important for transformation of cells. Establish specific diagnosis method is the foundation to control and prevention the disease. mechanism of JSRV is key point to understand the disease.
     OBJECTIVE AND METHOD:Jaagsiekte sheep retrovirus should be detected by using specific PCR and invested the relationship between OPA and gene mutation. The specific primers were designed according to sequences of JSRV in GenBank. And the peptide sequence of env, YXXM was take into count in designing of primers. The spefic PCR method could used in detection of JSRV,and the clinical sambles were detection by the method. High mutation rate site in gene nras、kras、pik3ca、egfr、p53was confirmed by search SANGER data bank.Exon of gene nras、kras、pik3ca、egfr、p53was confirmed by search data bank of UCSC and GenBank. Gene mutation site was detection by using technique of PCR-SSCP and the samples were sequencing. Three pairs of primers were designed according to the sequence of strain enJSRV-20. Sequences of sheep's and goat's enJSRV were amplified by PCR technology and these PCR products were cloned into pMD18-T vector and then sequenced.
     RESULTS:(1)The method of spefic PCR showed high sensitivity, With high specificity and repeatability. The lowest level of10~20copies of the virus.DNA or cDNA can be detected by the PCR method.(2)10clinic samples were positive detected by the method.10positive samples and10negative samples were detection by the method of PCR-SSCP,The mutation was detection in the second exon of kras in2positive sample. The mutation site was in the12th genetic code, Which nucleotide G was mution to T,amino Glycine was mutivon to valine.The mutation of7th exon of gene p53was detectied in one sample. Which nucleotide T mution to C, amino was not mutivon.(3)The complete genome of goat's and sheep's enJSRV were obtained successfuly. Analysis results showed that the sequence of sheep's enJSRV was99.4%similarity with enJSRV-20and90.9%similarity with strain JS7. Analysis results show that the sequences of goat's enJSRV was94.2%similarity with enJSRV-5and88.1%similarity with strain JS7. The sequence of sheep'senJSRV was93.1%similarity with goat's enJSRV. enJSRV promoter methylation analysis of sheep and goat tissue showed that:methylation and unmethylation enJSRV promoter was detection in all the organization DNA.(4)The gene pro、env were link to eukaryotic expression vector confirm by the enzyme cut reaction, Protein immune fluorescence and Western Blot test showed that constructuring plasmid EGFP-enpro%pcDNA3.1-enenv can the instantaneous expression in eukaryotic cells.
     CONCLUSIONS:(1)The specific RCR detection method of JSRV was established in this study, and it is important for studying OPA control measures.(2)Gene mutations of kras and p53was detection in JSRV infection tumor tissue will be useful in the molecular pathogenesis and further study of OPA.(3) The complete genome of goat'sand sheep's enJSRV were amplication and sequence analysis, methylation and unmethylation enJSRV promoter were detection in all the organization DNA.(4) The construction of the enJSRV pro and env eukaryotic express plasmid will provides an important experimental platform to study of enJSRV function and inhibiting virus infection.
引文
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