蛋白KIAA1751和XLF的功能研究
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摘要
真核生物对维持基因组的稳定性及防止非整倍体的产生,有其一套完整的保护机制,即细胞周期调控、检验点调控以及对损伤DNA的修复。当细胞感应到DNA损伤、复制应力或有丝分裂异常,招募和激活其下游的信号转导分子和效应分子,延迟细胞进入细胞周期的下一个阶段。DNA双链损伤(DSB)是已知的最严重的细胞损伤,只要有一处未被修复的DSB就能引发程序性细胞凋亡。同源重组(HR)和非同源末端连接(NHEJ)是细胞内最主要的DSB修复途径。本论文分为两个部分:
     (1)KIAA1751是一个含有ASH结构域的蛋白。含有这个结构域的蛋白通常与纤毛、鞭毛、中心体、以及高尔基体有关,并具有结合微管的功能。本文发现KIAA1751蛋白在细胞内主要定位在细胞核,ASH结构域突变体(N475A)对细胞内定位没有明显变化。抑制KIAA1751的表达导致紫杉醇诱导的纺锤体装配检验点激活的缺陷,提示KIAA1751参与纺锤体装配检验点的调控。
     (2)NHEJ核心因子XLF通过与XRCC4-连接酶Ⅳ复合物中的XRCC4结合,来稳定并激活DNA连接酶Ⅳ对损伤DNA末端的连接活性;Werner综合症中缺陷的蛋白WRN既有解旋酶活性,又有外切核酸酶活性。在XRCC4-连接酶Ⅳ复合物与损伤DNA末端连接之前,WRN可以通过结合XRCC4来与这一复合物相互作用,激活其自身的外切核酸酶活性,使得其在NHEJ过程中作为DNA末端加工因子行使核酸酶功能。我们验证了抑制XLF的表达导致DNA损伤修复的缺陷,发现XLF自身和WRN对XLF的转录有正调节作用。
To ensure genome integrity and prevent aneuploidy,eukaryotes have evolved an integrated protective mechanism,including cell cycle control,checkpoint control,and DNA repair.When a cell senses DNA damage,replication stress,or abnormal mitosis, it recruits and activates a series of signal transducers and effectors,thus halting from entering into the next ophase of the cell cycle.DNA double-strand break(DSB) is probably the most lethal attack,with as little as one unrepaired DSB being capable of triggering programmed cell death.Homologous recombination(HR) and nonhomologous end-joining(NHEJ) are the major cellular DSB repair pathways.This thesis research contains two parts:
     (1) KIAA1751 is an ASH domain-containing protein.This domain is present in proteins associated with cilia,flagella,the centrosome,and the Golgi complex,and possesses a microtubule-binding function.This research has showed that KIAA1751 mainly locates in the nucleus,mutation of its ASH domain does not affect its localization.We have also found that depletion of KIAA1751 by siRNA leads to a defective spindle checkpoint activation induced by taxol,indicating that KIAA1751 is involved in the spindle checkpoint control.
     (2) By interacting with the XRCC4-DNA ligase IV complex,the NHEJ core factor XLF stabilizes and stimulates the DNA ligase to the damaged DNA.The human RecQ family helicase WRN,which is mutated in the Werner syndrome, possesses both helicase and 3'-5' exonuclease activities.Before the ligation of XRCC4-DNA ligase IV complex and damaged DNA terminal,WRN interacts with this complex by binding to XRCC4.Here we have confirmed that depletion of XLF leads cellular defects in DNA repair,and have found that XLF itself along with WRN positively regulates the transcription of XLF.
引文
Abraham RT.Cell cycle checkpoint signaling through the ATM and ATR kinases.Genes Dev2001:15(17):2177-2196.
    Ahnesorg P,Smith P,Jackson SP.XLF interacts with the XRCC4-DNA ligase IV complex to promote DNA nonhomologous end-joining.Cell 2006:124:301-313.
    Andersen JS,et al.Proteomic characterization of the human centrosome by protein correlation profiling.Natrue 2003:426:570-574.
    Barnes DE,Stamp G,Rosewell I,Denzel A,Lindahl T.Targeted disruption of the gene encoding DNA ligase IV leads to lethality in embryonic mice.Curr Biol 1998:8,1395-1398.
    Bartek J,Lukas J.Chkl and Chk2 kinases in checkpoint control and cancer.Cancer Cell 2003:3(5):421-429.
    Biggins S,Murray AW.The budding yeast protein linase lpll/Aurora allows the absence of tension to activate the spindle chenkpoint,Genes Dev 2001:15:3118-3129.
    Bond J,Roberts E,Mochida GH et al.ASPM is a major determinant of cerebral cortical size.Nat Genet 2002:32(2):316-320.
    Brosh RM,Von K.C,Sommers JA,Karmakar P,Opresko PL,Piotrowski J,Dianova I,Dianov GL,Bohr VA.Werner syndrome protein interacts with human flap endonuclease 1 and stimulates its cleavage activity.EMBO J 2001:20:5791-5801.
    Bryans M,Valenzano MC,Stamato TD.Absence of DNA ligase IV protein in XR-1 cells:evidence for stabilization by XRCC4.Mut Res 1999:433:53-58.
    Buck D,Malivert L,de Chasseval R,Barraud A,Fondaneche MC,Sanal O,Plebani A,Stephan JL,Hufnagel M,le Deist F,et al.Cernunnos,a novel nonhomologous end-joining factor,is mutated in human immunodeficiency with microcephaly.Cell 2006:124:287-299.
    Chappell C,Hanakahi LA,Karimi-Busheri F,Weinfeld M,West SC.Involvement of human polynucleotide kinase in double-strand break repair by non-homologous end joining.EMBO J 2002:21:2827-2832.
    Cheeseman IM,Anderson S,Jwa M,Green EM,Kang J,Yates JR,Chan CS,Drubin DG, Barnes G Phospho-regulation of kinetochore-microtuble attachments by the Aurora kinase lpllp.Cell 2002:111:163-172.
    Chen L,Trujillo K,Sung P,Tom kinson AE.Interactions of the DNA ligase IV-XRCC4 complex with DNA ends and the DNA-dependent protein kinase.J Biol Chem.2002:275:26196-26205.
    Cooper MP,Machwe A,Orren DK,Brosh RM,Ramsden D,Bohr VA.Ku complex interacts with and stimulates the Werner protein.Genes Dev 2000:14:907-912.
    Critchlow SE,Bowater RP,Jackson SP.Mammalian DNA double-strand break repair protein XRCC4 interacts with DNA ligase IV.Curr Biol 1997:7:588-598.
    Dai Y,Kysela B,Hanakahi LA,Manolis K,Riballo E,Stumm M,Harville TO,West SC,Oettinger MA,Jeggo PA.Nonhomologous end joining and V(D)J recombination require an additional factor.Proc Natl Acad Sci USA 2003:100:2462-2467.
    Difilippantonio MJ,Petersen S,Chen HT,Johnson R,Jasin M,Kanaar R,Ried T,Nussenzweig A.Evidence for replicative repair of DNA double-strand breaks leading to oncogenic translocation and gene amplification.J Exp Med 2002:196:469-480.
    Falck J,Coates J,Jackson SP.Conserved modes of recruitment of ATM,ATR and DNA-PKcs to sites of DNA damage.Nature 2005:434(7033):605-611.
    Ferguson DO,Alt FW.DNA double strand break repair and chromosomal translocation:lessons from animal models.Oncogene 2001:20:5572-5579.
    Frank KM,Sekiguchi JM,Seidl KJ,Swat W,Rathbun GA,Cheng HL,Davidson L,Kangaloo L,Alt FW.Late embryonic lethality and impaired V(D)J recombination in mice lacking DNA ligase IV.Nature 1998:396:173-177.
    Gellert M.V(D)J recombination:RAG proteins,repair factors,and regulation.Annu Rev Biochem2002:71:101-132.
    Grawunder U,Wilm M,Wu X,Kulesza P,Wilson TE,Mann M,Lieber MR.Activity of DNA ligase IV stimulated by complex formation with XRCC4 protein in mammalian cells.Nature 1997:388:492-495.
    Grawunder U,Zimmer D,Fugmann S,Schwarz K,Lieber MR.DNA ligase IV is essential for V(D)J recombination and DNA double-strand break repair in human precursor lymphocytes.Mol Cell 1998a:2:477-484.
    Grawunder U,Zimmer D,Lieber MR.DNA ligase IV binds to XRCC4 via a motif located between rather than within its BRCT domains.Curr Biol 1998b:8:873-876.
    Gray MD,Shen JC,Kamath-Loeb AS,Blank A,Sopher BL,Martin GM,Oshima J,Loeb LA.The Werner syndrome protein is a DNAhelicase.Nat Genet 1997:17:100-103.
    Gu Y,Seidl KJ,Rathbun GA,Zhu C,Manis JP,van der Stoep N,Davidson L,Cheng HL,Sekiguchi JM,Frank K,et al.Growth retardation and leaky SCID phenotype of Ku70-deficient mice.Immunity 1997:7:653-665.
    Haber JE.Partners and pathways—repairing a double-strand break.Trends Genet 2000:16:259-264.
    Hannan MA,Hellani A,Al Khodairy FM,et al.Deficiency in the repair of UV-induced DNA damage in human skin fibroblasts compromised for the ATM gene.Carcinogenesis 2002:23(10):1617-1624.
    Hefferin ML,Tomkinson AE.Mechanism of DNA double-strand break repair by non-homologous end joining.DNA Repair 2005:4:639-648.
    Herrmann G,Lindahl T,Schar P.Saccharomyces cerevisiae LIF1:a function involved in DNA double-strand break repair related to mammalian XRCC4.EMBO J 1998:17:4188-4198.
    Hildebrandt F,Otto E.Cilia and centrosomes:a unifying pathogenic concept for cystic kidney disease?Nat Rev Genet 2005:6:928-940.
    Hsu HL,Yannone SM,Chen DJ.Defining interactions between DNA-PK and ligase IV/XRCC4.DNA Repair 2002:1:225-235.
    Huang S,Li B,Gray MD,Oshima J,Mian IS,Campisi J.The premature ageing syndrome protein,WRN,is a 3'—>5' exonuclease.Nat Genet 1998:20:114-116.
    Jackson AP,Eastwood H,Bell SM et al.Identification of microcephalin,a protein implicated in determining the size of the human brain.Am J Hum Genet 2002:71:136-142.
    Jackson AP,McHale DP,Campbell DA et al.Primary autosomal microcephaly (MCPH1) maps to chromosome 8p22-pter.Am J Hum Genet 1998:63:541-546.
    Jamieson CR,Fryns JP,Jacobs J,Matthijs G,Abramowicz MJ.Primary autosomal recessive microcephaly:MCPH5 maps to Iq25-lq32.Am J Hum Genet 2000:67 (6): 1575-1577.
    Jayaram S,Ketner G,Adachi N,Hanakahi LA.Loss of DNA ligase IV prevents recognition of DNA by double-strand break repair proteins XRCC4 and XLF.Nucleic Acids Res 2008:36(18):5773-5786.
    Jazayeri A,Falck J,Lukas C,et al.ATM-and cell cycle-dependent regulation of ATR in response to DNA double-strand breaks.Nat Cell Biol 2006:8(1):37-45.
    Junop MS,Modesti M,Guarne A,Ghirlando R,Gellert M,Yang W.Crystal structure of the Xrcc4 DNA repair protein and implications for end joining.EMBO J 2000:19:5962-5970.
    Karmakar P,Piotrowski J,Brosh RM Jr.Sommers JA,Miller SP,Cheng WH,Snowden CM,Ramsden DA,Bohr VA.Werner protein is a target of DNA-dependent protein kinase in vivo and in vitro,and its catalytic activities are regulated by phosphorylation.J Biol Chem 2002:277:18291-18302.
    Kemp CA,et al.Centrosome maturation and duplication in C.elegans require the coiled-coil protein SPD-2.Dev Cell 2004:6:511-523.
    Khanna KK,Jackson SP.DNA double-strand breaks:signaling,repair and the cancer connection.Nat Genet 2001:27:247-254.
    Koch CA,Agyei R,Galicia S,Metalnikov P,O'Donnell P,Starostine A,Weinfeld M,Durocher D.Xrcc4 physically links DNA end processingby polynucleotide kinase toDNA ligationby DNA ligase IV.EMBO J 2004:23:3874-3885.
    Kops GJ,Weaver BA,Cleveland DW.On the road to cancer aneuploidy and the mitotic chenkpoint.Nat Rev Cancer 2005:5:773-785.
    Kozlov SV,Graham ME,Peng CY,et al.Involvement of novel autophosphorylation sites in ATM activation.EMBO J 2006:25(15):3504-3514.
    Kumar A,Girimaji SC,Duwari MR,Blanton SH.Mutations in STIL,encoding a pericentriolar and centrosomal protein,cause primary microcephaly.Am J Hum Genet 2009:84(2):286-90.
    Kusumoto R,Dawut L,Marchetti C,Lee JW,Vindigni A,Ramsden D,Bohr VA.Werner Protein Cooperates with the XRCC4-DNA Ligase IV Complex in End-Processing.Biochemistry 2008:47(28):7548-7556.
    Kysela B,Doherty AJ,Chovanec M,Stiff T,Ameer-Beg SM,Vojnovic B,Girard PM,Jeggo PA.Ku stimulation of DNA ligase IV-dependent ligation requires inward movement along the DNA molecule.J Biol Chem 2003:278:22466-22474.
    Lan L,Nakajima S,Komatsu K,Nussenzweig A,Shimamoto A,Oshima J,Yasui A.Accumulation of Werner protein at DNA double-strand breaks in human cells.J Cell Sci2005:118:4153-4162.
    Leber R,Wise TW,Mizuta R,Meek K.The XRCC4 gene product is a target for and interacts with the DNA-dependent protein kinase.J Biol Chem 1998:273:1794-1801.
    Lee KJ,Huang J,Takeda Y,Dynan WS.DNA ligase IV and XRCC4 form a stable mixed tetramer that functions synergistically with other repair factors in a cell-free end-joining system.J Biol Chem 2000:275:34787-34796.
    Lieber MR,Ma Y,Pannicke U,Schwarz K.Mechanism and regulation of human non-homologous DNA end-joining.Nat Rev Mol Cell Biol 2003:4:712-720.
    Lieber MR,Ma Y,Pannicke U,Schwarz K.The mechanism of vertebrate nonhomologous DNA end joining and its role in V(D)J recombination.DNA Repair 2004:3:817-826.
    Ma Y,Lu H,Tippin B,Goodman MF,Shimazaki N,Koiwai O,Hsieh CL.,Schwarz K,Lieber MR.A biochemically defined system for mammalian nonhomologous DNA end joining.Mol Cell 2004:16:701-713.
    Martin GM.Genetics and aging;the Werner syndrome as a segmental progeroid syndrome.Adv Exp Med Biol 1985:190:161-170.
    McElhinny SAN,Snowden CM,McCarville J,Ramsden DA.Ku recruits the XRCC4-ligase IV complex to DNA ends.Mol Cell Biol 2000:20:2996-3003.
    Mills KD,Ferguson DO,Alt FW.The role of DNA breaks in genomic instability and tumorigenesis.Immunol Rev 2003:194:77-95.
    Mirzoeva OK,Petrini JHJ.DNA damage-dependent nuclear dynamics of the Mrell complex.Mol Cell Biol 2001:21:281-288.
    Modesti M,Kanaar R.Homologous recombination:from model organisms to human disease.Genome Biol 2001:2:R1014.
    Modesti M,Hesse JE,Gellert M.DNA binding of Xrcc4 protein is associated with V(D)J recombination but not with stimulation of DNA ligase IV activity.EMBO J 1999:18:2008-2018.
    Modesti M,Junop MS,Ghirlando R,van de Rakt M,Gellert M,Yang W,Kanaar R.Tetramerization and DNA ligase IV interaction of the DNA double-strand break repair protein XRCC4 are mutually exclusive.J Mol Biol 2003:334:215-228.
    Moshous D,Callebaut I,de Chasseval R,Corneo B,Cavazzana Calvo M,Le Deist F,Tezcan I,Sanal O,Bertrand Y,Philippe N,et al.Artemis,a novel DNA double-strand break repair/V(D)J recombination protein,is mutated in human severe combined immune deficiency.Cell 2001:105:177-186.
    Nussenzweig A,Chen C,da Costa Soares V,Sanchez M,Sokol K,Nussenzweig MC,Li GC.Requirement for Ku80 in growth and immunoglobulin V(D)J recombination.Nature 1996:382:551-555.
    O'Driscoll M,Cerosaletti KM,Girard PM,Dai Y,Stumm M,Kysela B,Hirsch B,Gennery A,Palmer SE,Seidel J,et al.DNA ligase IV mutations identified in patients exhibiting developmental delay and immunodeficiency.Mol Cell 2001:8:1175-1185.
    Palframan WJ,Meehl JB,Jaspersen SL,Winey M,Murray AW.Anaphase inactivation of the spindle chenkpoint.Sciencexpress 2006:6:1-9.
    Pattison L,Crow YJ,Deeble VJ et al.A fifth locus for primary autosomal recessive microcepha lymapsto chromosome lq31.Am J Hum Genet 2000:67:1578-1580.
    Ponting CP.A novel domain suggests a ciliary function for ASPM,a brain size determining gene.2006:22:1031-1035.
    Riballo E,Critchlow SE,Teo SH,Doherty AJ,Priestley A,Broughton B,Kysela B,Beamish H,Plowman N,Arlett CF,et al.Identification of a defect in DNA ligase IV in a radiosensitive leukaemia patient.Curr Biol 1999:9:699-702.
    Rich T,Allen RL,Wyllie AH.Defying death after DNA damage.Nature 2000:407:777-783.
    Robins P,Lindahl T.DNA ligase IV from HeLa cell nuclei.J Biol Chem 1996:271:24257-24261.
    Ross JJ,Frias JL.Microcephaly.In:Congenital malformations of the brain and skull.Handbook of clinical neurology.Biomedical Press 1977:30:507-524.
    Sancar A,Lindsey-Biltz LA,Unsal-Kacmaz K,et al.Molecular mechanisms of mammalian DNA repair and the DNA damage checkpoints.Annu Rev Biochem 2004:73:39-85.
    Shiloh Y.ATM and related protein kinases:safeguarding genome integrity.Nat Rev Cancer 2003:3(3):155-168.
    Sibanda BL,Critchlow SE,Begun J,Pei XY,Jackson SP,Blundell TL,Pellegrini L.Crystal structure of an Xrcc4-DNA ligase IV complex.Nat Struct Biol 2001:8:1015-1019.
    Smith GCM,Jackson SP.The DNA-dependent protein kinase.Genes Dev 1999:13:916-934.
    Taccioli GE,Amatucci AG,Beamish HJ,Gell D,Xiang XH,Arzayus MIT,Priestley A,Jackson SP,Rothstein AM,Jeggo PA,Herrera VLM.Targeted disruption of the catalytic subunit of the DNA-PK gene in mice confers severe combined immunodeficiency and radiosensitivity.Immunity 1998:9:355-366.
    Teo SH,Jackson SP.Liflp targets the DNA ligase Lig4p to sites of DNA double-strand breaks.Curr Biol 2000:10:165-168.
    Wang H,Rosidi B,Perrault R,Wang M,Zhang L,Wind-hofer F,Iliakis G DNA ligase Ⅲ as a candidate component of backup pathways of nonhomologous end joining.Cancer Res.2005:65:4020-4030.
    West SC.Molecular views of recombination proteins and their control.Nat Rev Mol Cell Biol 2003:4:435-445.
    Weterings E,Van Gent DC.The mechanism of non-homologous end-joining:a synopsis of synapsis.DNA Repair 2004:3:1425-1435.
    Yannone SM,Roy S,Chan DW,Murphy MB,Huang S,Campisi J,Chen DJ.Werner syndrome protein is regulated and phosphorylated by DNA-dependent protein kinase.J Biol Chem 2001:276:38242-38248.
    Zachos G,Black EJ,Walker M,Scott MT,Vagnarelli P,Earnshaw WC,Gillespie AF.Chkl is required for spindle checkpoint function.Dev cell 2007:12:247-260.
    Zhang YG,Cho YY,Petersen BL,et al.Ataxia telangiectasia mutated proteins,MAPKs,and RSK2 are involved in the phosphorylation of STAT3.J Biol Chem 2003:278(15):12650-12659.
    01ivos-Glander,IM,et al.The oculocerebrorenal syndrome gene product is a 105-kD protein localized to the Golgi complex.Am J Hum Genet 1995:57:817-823.
    Pazour GJ,et al.Proteomic analysis of a eukaryotic cilium.J Cell Biol 2005:170:103-113.
    Pelletier L,et al.The caenorhabditis elegans centrosomal protein SPD-2 is required for both pericentriolar material recruitment and centriole duplication.Curr Biol 2004:14:863-873.
    Poole CA,et al.Confocal analtsis of primary cilia structure and colocalization with the Golgi apparatus in chondrocytes and aortic smooth muscle cells.Cell Biol Int 1997:21:483-494.
    Redon C,Pilch D,Rogakou E,et al.Histone H2A variants H2AX and H2AZ.Curr Opin Gene Dev 2002:12(2):162-169.
    Reisinger E,et al.Codl06,a novel synaptic protein experssed in sensory hair cells of the inner ear and in CNS neuros.Mol Cell Neurosic 2005:28:106-117.
    Ren XF,Lim S,Smith MT,Zhang LP.Werner sundrome protein,WRN,protects cells from DNA damage induced by the benzene metabolite hydroquinone.Toxicological Scciences 2009:107(2):367-375.
    Riballo E,Woodbine L,Stiff T,Walker SA,Goodarzi AA,Jeggo PA.XLF/Cernunnos promotes DNA IV-XRCC4 re-adenylation following ligation.Nucleic Acids Res 2009:37(2):482-492.
    Rios RM,et al.GMAP-210 recruits gamma-tubulin complexs to cis-Golgi membranes and is required for Golgi ribbon formation.Cell 2004:118:323-335.
    Rupp G,et al.The chlamydomonas PF6 locus encodes a large alanine/proling rich polypeptide that is required for assenbly of a central pair projection and regulates flagellar motility.Mol Biol Cell 2001:12:739-751.
    Sapiro R,et al.Male infertility,impaired sperm motility,and hydrocephalus in mice deficient in sperm-associated antigen 6.Mol Cell Biol 2002:22:6298-6305.
    Saunders RD,et al.The Drosophila gene abnarmal spindle encodes a novel microtubule-associated protein that associates with the polar regions of the mitotic spindle.J Cell Biol 1997:137:881-890.
    Schwartz M,Oren YS,Bester AC,Rahat A,Sfez R,Yitzchaik S,de Villartay J,Kerem B.Impaired replication stress response in cells from innunodeficiency patients carrying Cernunnos/XLF mutations.PloS ONE 2009:4(2):1-10.
    Takatsuki A,et al.Possible implication of Golgi-nucleating function for the centrosome.Biochem Biophys Res Commun 2002:291:494-500.
    Zhang Z,et al.Dissecting the axoneme interactome:the mammalian orthologue of Chlamydomonas PF6 interacts with sperm-associated antigen 6,the mammalian orthologue of Chlamydomonas PF16.Mol Cell Proteomics 2005:4:914-923.
    Zhong X,Liu M,Zhao A,Pfeifer GP,Xu XZ.The abnermal spindle-like,microcephaly associated (ASPM) gene encodes a centrosomal protein.Cell Cycle 2005:4:1227-1229.
    Zhong XA,Pfeifer GP,Xu XZ.Microcephalin encodes a centrosomal protein.Cell Cycle 2006:5:457-458.

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