RNA干扰下调cyclin T1蛋白的表达及其对靶细胞和HIV-1的影响
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摘要
RNA干扰(RNAi)是一种由小干扰RNA(siRNA)介导的靶序列特异性RNA降解机制,现在它不仅被当作一种研究工具,还可以用作一种抑制病毒感染的基因治疗策略。在哺乳动物细胞里,基于小发夹RNA(shRNA)的RNA干扰技术可以成功下调细胞或者病毒基因的表达。
     我们在HeLa,293T以及U373-MAGI-CCR5e细胞中表达靶向细胞内cyclin T1蛋白的shRNA表达质粒后,发现表达质粒CT-4可以特异的下调细胞内cyclin T1蛋白的表达。同时,我们的结果显示cyclin T1蛋白的下调水平跟转染的shRNA表达质粒的剂量以及转染的时间都有一定的正相关性。
     CDK9/cyclin T1这一复合物在细胞内的活性不依赖于细胞周期,其作用是参与转录的延伸。这表明作为这个复合物的一个亚单位的cyclin T1对细胞的存活是至关重要的。但是,我们的实验表明在培养的细胞系中,下调cyclin T1蛋白的表达既没有诱导宿主细胞产生凋亡,甚至没有影响细胞周期的变化。我们的结果与刚刚报道的下调P-TEFb的表达没有引起细胞死亡相一致。在细胞水平,cyclin T1将会是一个很好的抑制HIV-1复制的细胞内靶位点。
RNA interference (RNAi), a sequence-specific RNA degradation mechanism mediated by small interfering RNA (siRNA), can be used not only as a research tool but also as a therapeutic strategy for viral infection. RNAi with short hairpin RNA (shRNA) has been successfully utilized in a number of recent studies in cultured mammalian cells to reduce the expression of specific cellular and viral genes.Here, intracellularly expressed shRNA based on plasmid vector were utilized in 293T, HeLa and U373-MAGI-CCR5e cells. Our results indicated that intracellularly generated shRNAs could specifically down-regulate cyclin T1 expression. Similar phenomena were demonstrated in 293T and U373-MAGI-CCR5e cells. Additionally, our results indicated that the inhibition of cyclin Tl expression by shRNAs was both dose- and time-dependent.CDK9/cyclin T directs its activity in a cell cycle independent manner and was involved in transcription during the elongation steps. This means that cyclin Tl is important for cell survival. Surprisingly, knockdown of cyclin Tl protein neither influenced the cell cycle nor induced apoptosis in cultured cell lines, and this was consistent with a previous report that knockdown of P-TEFb led to inhibition of HIV-1 replication but not resulted in cell death. Our data indicated that down regulation of
    cyclin Tl did not induce significant apoptosis of transfected cells and cyclin Tl could be used as a potential target for inhibiting HIV-1 replication.We have also shown that knockdown of cyclin Tl expression by RNA interference inhibited HIV-1 replication specifically and effectively. Furthermore, we observed the correlation between the levels of down-regulation of cyclin Tl expression and the inhibition of HIV-1 replication, indicating that the replication level of HIV-1 may be dependent on the amount of cyclin Tl in cultured cells.In previous reports about RNAi with HIV-1 replication and infection, chemically synthesized siRNAs were most commonly used, however, synthetic siRNAs do not persist for long period in cells and are not feasible to be delivered into the vast number of target cells like T lymphocytes and macrophages. Our result renders a possibility to deliver the anti-HIV shRNA-encoding genes by viral vectors into target cells and stably express the shRNAs.Taken together, this study demonstrated the cyclin Tl could be a promising cellular target for suppression of HIV-1 replication by DNA-based shRNAs. Now, We are focusing on the delivery of shRNA-encoding genes into primary cells, such as T lymphocytes, monocytes and macrophages by lentiviral vectors and examine the feasibility to use cyclin Tl as target in genetic therapy of AIDS.
引文
Anderson, J., Banerjea, A., Planelles, V. and Akkina, R. (2003) Potent suppression of HIV type 1 infection by a short hairpin anti-CXCR4 siRNA. AIDS Res Hum Retroviruses 19(8), 699-706.
    Bagella, L., MacLachlan, T.K., Buono, R.J., Pisano, MM., Giordano, A. and De Luca, A. (1998) Cloning of murine CDK9/PITALRE and its tissue-specific expression in development. J Cell Physiol 177(2), 206-13.
    Banerjea, A., Li, M.J., Bauer, G., Remling, L., Lee, N.S., Rossi, J. and Akkina, R. (2003) Inhibition of HIV-1 by lentiviral vector-transduced siRNAs in T lymphocytes differentiated in SCID-hu mice and CD34+ progenitor cell-derived macrophages. Mol Ther 8(1), 62-71.
    Basyuk, E., Suavet, R, Doglio, A., Bordonne, R. and Bertrand, E. (2003) Human let-7 stem-loop precursors harbor features of RNase Ⅲ cleavage products. Nucleic Acids Res 31(22), 6593-7.
    Bazan, J.F. (1996) Helical fold prediction for the cyclin box. Proteins 24(1), 1-17.
    Bentley, D.L. (1995) Regulation of transcriptional elongation by RNA polymerase Ⅱ. Curr Opin Genet Dev 5(2), 210-6.
    Berger, E.A., Murphy, P.M. and Farber, J.M. (1999) Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease. Annu Rev Immunol 17, 657-700.
    Bernstein, E., Caudy, A.A., Hammond, S.M. and Hannon, G.J. (2001) Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409(6818), 363-6.
    Bieniasz, P.D., Grdina, T.A., Bogerd, H.P. and Cullen, B.R. (1998) Recruitment of a protein complex containing Tat and cyclin T1 to TAR governs the species specificity of HIV-1 Tat. Embo J 17(23), 7056-65.
    Bitko, V. and Barik, S. (2001) Phenotypic silencing of cytoplasmic genes using sequence-specific double-stranded short interfering RNA and its application in the
     reverse genetics of wild type negative-strand RNA viruses. BMC Microbiol 1(1), 34.
    Blair, W.S., Fridell, R.A. and Cullen, B.R. (1996) Synergistic enhancement of both initiation and elongation by acidic transcription activation domains. Embo J 15(7), 1658-65.
    Boden, D., Pusch, O., Lee, F., Tucker, L. and Ramratnam, B. (2003a) Human immunodeficiency virus type 1 escape from RNA interference. J Virol 77(21), 11531-5.
    Boden, D., Pusch, O., Lee, R, Tucker, L., Shank, P.R. and Ramratnam, B. (2003b)
    Promoter choice affects the potency of HIV-1 specific RNA interference. Nucleic Acids Res 31(17), 5033-8.
    Bohnsack, M.T., Czaplinski, K. and Gorlich, D. (2004) Exportin 5 is a RanGTP-dependent dsRNA-binding protein that mediates nuclear export of pre-miRNAs. Rna 10(2), 185-91.
    Brisibe, E.A., Okada, N., Mizukami, H., Okuyama, H. and Fujii, Y.R. (2003) RNA interference: potentials for the prevention of HIV infections and the challenges ahead. Trends Biotechnol 21(7), 306-11.
    Butticaz, C, Ciuffi, A., Munoz, M., Thomas, J., Bridge, A., Pebernard, S., Iggo, R., Meylan, P. and Telenti, A. (2003) Protection from HIV-1 infection of primary CD4 T cells by CCR5 silencing is effective for the full spectrum of CCR5 expression. Antivir Ther 8(5), 373-7.
    Caplen, N.J., Fleenor, J., Fire, A. and Morgan, R.A. (2000) dsRNA-mediated gene silencing in cultured Drosophila cells: a tissue culture model for the analysis of RNA interference. Gene 252(1-2), 95-105.
    Caplen, N.J., Parrish, S., Imani, F., Fire, A. and Morgan, R.A. (2001) Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems. Proc Natl Acad Sci U S A 98(17), 9742-7.
    Capodici, J., Kariko, K. and Weissman, D. (2002) Inhibition of HIV-1 infection by small interfering RNA-mediated RNA interference. J Immunol 169(9), 5196-201.
    Carmell, M.A., Xuan, Z., Zhang, M.Q. and Hannon, G.J. (2002) The Argonaute family, tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis. Genes Dev 16(21), 2733-42.
    Carthew, R.W. (2002) RNA interference: the fragile X syndrome connection. Curr Biol 12(24), R852-4.
    Caudy, A.A., Ketting, R.F., Hammond, S.M., Denli, A.M., Balhoorn, A.M., Tops, B.B., Silva, J.M., Myers, M.M., Hannon, G.J. and Plasterk, R.H. (2003) A micrococcal nuclease homologue in RNAi effector complexes. Nature 425(6956), 411-4.
    Caudy, A.A., Myers, M., Hannon, G.J. and Hammond, S.M. (2002) Fragile 'X-related protein and VIG associate with the RNA interference machinery. Genes Dev 16(19), 2491-6.
    Chiu, Y.L., Cao, H., Jacque, J.M., Stevenson, M. and Rana, T.M. (2004) Inhibition of human immunodeficiency virus type 1 replication by RNA interference directed against human transcription elongation factor P-TEFb (CDK9/CyclinTl). J Virol 78(5), 2517-29.
    Clemens, J.C., Worby, C.A., Simonson-Leff, N., Muda, M., Maehama, T., Hemmings, B.A. and Dixon, J.E. (2000) Use of double-stranded RNA interference in Drosophila cell lines to dissect signal transduction pathways. Proc Natl Acad Sci U S A 97(12), 6499-503.
    Coburn, G.A. and Cullen, B.R. (2002) Potent and specific inhibition of human immunodeficiency virus type 1 replication by RNA interference. J Virol 76(18), 9225-31.
    Cogoni, C. (2001) Homo logy-dependent gene silencing mechanisms in fungi. Annu Rev Microbiol 55, 381-406.
    Connor, R.I., Chen, B.K., Choe, S. and Landau, N.R. (1995) Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes. Virology 206(2), 935-44.
    Cullen, B.R. (1998) HIV-1 auxiliary proteins: making connections in a dying cell. Cell 93(5), 685-92.
    Dahmus, M.E. (1994) The role of multisite phosphorylation in the regulation of RNA polymerase Ⅱ activity. Prog Nucleic Acid Res Mol Biol 48, 143-79.
    de Falco, G. and Giordano, A. (1998) CDK9 (PITALRE): a multifunctional cdc2-related kinase. J Cell Physiol 177(4), 501-6.
    De Luca, A., De Falco, M., Baldi, A. and Paggi, M.G. (2003) Cyclin T: three forms for different roles in physiological and pathological functions. J Cell Physiol 194(2), 101-7.
    De Luca, A., Russo, P., Severino, A., Baldi, A., Battista, T., Cavallotti, I., De Luca, L., Baldi, F., Giordano, A. and Paggi, M.G. (2001a) Pattern of expression of cyclin T1 in human tissues. J Histochem Cytochem 49(6), 685-92.
    De Luca, A., Tosolini, A., Russo, P., Severino, A., Baldi, A., De Luca, L, Cavallotti, I., Baldi, F., Giordano, A., Testa, J.R. and Paggi, M.G. (2001b) Cyclin T2a gene maps on human chromosome 2q21. J Histochem Cytochem 49(6), 693-8.
    Doench, J.G., Petersen, C.P. and Sharp, P.A. (2003) siRNAs can function as miRNAs. Genes Dev 17(4), 438-42.
    Dynlacht, B.D. (1997) Regulation of transcription by proteins that control the cell cycle. Nature 389(6647), 149-52.
    Elbashir, S.M., Harborth, J., Lendeckel, W., Yalcin, A., Weber, K. and Tuschl, T. (2001a) Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411(6836), 494-8.
    Elbashir, S.M., Lendeckel, W. and Tuschl, T. (2001b) RNA interference is mediated by 21- and 22-nucleotide RNAs. Genes Dev 15(2), 188-200.
    Elbashir, S.M., Martinez, J., Patkaniowska, A., Lendeckel, W. and Tuschl, T. (2001c) Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate. Embo J 20(23), 6877-88.
    Emerman, M. and Malim, M.H. (1998) HIV-1 regulatory/accessory genes: keys to unraveling viral and host cell biology. Science 280(5371), 1880-4.
    Fadok, V.A., Bratton, D.L., Frasch, S.C, Warner, M.L. and Henson, P.M. (1998) The role of phosphatidylserine in recognition of apoptotic cells by phagocytes. Cell Death Differ 5(7), 551-62.
    Ferri, K.F. and Kroemer, G. (2000) Control of apoptotic DNA degradation. Nat Cell Biol 2(4), E63-4.
    Fire, A., Xu, S., Montgomery, M.K., Kostas, S.A., Driver, S.E. and Mello, C.C. (1998) Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391(6669), 806-11.
    Fu, T.J., Peng, J., Lee, G., Price, D.H. and Flores, O. (1999) Cyclin K functions as a CDK9 regulatory subunit and participates in RNA polymerase Ⅱ transcription. J Biol Chem 274(49), 34527-30.
    Garber, M.E. and Jones, K.A. (1999) HIV-1 Tat: coping with negative elongation factors. Curr Opin Immunol 11(4), 460-5.
    Garber, M.E., Wei, P., KewalRamani, V.N., Mayall, T.P., Herrmann, C.H., Rice, A.P., Littman, D.R. and Jones, K.A. (1998) The interaction between HIV-1 Tat and human cyclin T1 requires zinc and a critical cysteine residue that is not conserved in the murine CycT1 protein. Genes Dev 12(22), 3512-27.
    Garriga, J., Peng, J., Parreno, M., Price, D.H., Henderson, E.E. and Grana, X. (1998) Upregulation of cyclin T1/CDK9 complexes during T cell activation. Oncogene 17(24), 3093-102.
    Ge, Q., McManus, M.T., Nguyen, T., Shen, C.H., Sharp, P.A., Eisen, H.N. and Chen, J. (2003) RNA interference of influenza virus production by directly targeting mRNA for degradation and indirectly inhibiting all viral RNA transcription. Proc Natl Acad Sci U S A 100(5), 2718-23.
    Gitlin, L. and Andino, R. (2003) Nucleic acid-based immune system: the antiviral potential of mammalian RNA silencing. J Virol 77(13), 7159-65.
    Gitlin, L., Karelsky, S. and Andino, R. (2002) Short interfering RNA confers intracellular antiviral immunity in human cells. Nature 418(6896), 430-4.
    Glucksmann, A. (1951) The histogenesis of radiation-induced and of benzpyrene induced epidermal tumours in the mouse. J Pathol Bacteriol 63(1), 176-7.
    Grana, X., De Luca, A., Sang, N., Fu, Y., Claudio, P.P., Rosenblatt, J., Morgan, D.O. and Giordano, A. (1994) PITALRE, a nuclear CDC2-related protein kinase that phosphorylates the retinoblastoma protein in vitro. Proc Natl Acad Sci U S A 91(9), 3834-8.
    Grana, X. and Reddy, E.P. (1995) Cell cycle control in mammalian cells: role of cyclins, cyclin dependent kinases (CDKs), growth suppressor genes and cyclin-dependent kinase inhibitors (CKIs). Oncogene 11(2), 211-9.
    Greenblatt, J., Nodwell, J.R. and Mason, S.W. (1993) Transcriptional antitermination. Nature 364(6436), 401-6.
    Grishok, A., Pasquinelli, A.E., Conte, D., Li, N., Parrish, S., Ha, I., Baillie, D.L., Fire, A., Ruvkun, G. and Mello, C.C. (2001) Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing. Cell 106(1), 23-34.
    Gruenbaum, Y., Wilson, K.L., Harel, A., Goldberg, M. and Cohen, M. (2000) Review: nuclear lamins-structural proteins with fundamental functions. J Struct Biol 129(2-3), 313-23.
    Guo, S. and Kemphues, K.J. (1995) par-1, a gene required for establishing polarity in C. elegans embryos, encodes a putative Ser/Thr kinase that is asymmetrically distributed. Cell 81(4), 611-20.
    Hacker, G. (2000) The morphology of apoptosis. Cell Tissue Res 301(1), 5-17.
    Hammond, S.M., Bernstein, E., Beach, D. and Hannon, G.J. (2000) An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells. Nature 404(6775), 293-6.
    Hammond, S.M., Boettcher, S., Caudy, A.A., Kobayashi, R. and Hannon, G.J. (2001) Argonaute2, a link between genetic and biochemical analyses of RNAi. Science 293(5532), 1146-50.
    Hartzog, G.A., Wada, T., Handa, H. and Winston, F. (1998) Evidence that Spt4, Spt5, and Spt6 control transcription elongation by RNA polymerase Ⅱ in Saccharomyces cerevisiae. Genes Dev 12(3), 357-69.
    He, J., Choe, S., Walker, R., Di Marzio, P., Morgan, D.O. and Landau, N.R. (1995) Human immunodeficiency virus type 1 viral protein R (Vpr) arrests cells in the G2 phase of the cell cycle by inhibiting p34cdc2 activity. J Virol 69(11), 6705-11.
    Hengartner, M.O. (2000) The biochemistry of apoptosis. Nature 407(6805), 770-6.
    Hengartner, M.O. (2001) Apoptosis: corralling the corpses. Cell 104(3), 325-8.
    Henson, P.M., Bratton, D.L. and Fadok, V.A. (2001) Apoptotic cell removal. Curr Biol 11(19), R795-805.
    Herrmann, C.H. and Rice, A.P. (1993) Specific interaction of the human immunodeficiency virus Tat proteins with a cellular protein kinase. Virology 197(2), 601-8.
    Herrmann, C.H. and Rice, A.P. (1995) Lentivirus Tat proteins specifically associate with a cellular protein kinase, TAK, that hyperphosphorylates the carboxyl-terminal domain of the large subunit of RNA polymerase Ⅱ: candidate for a Tat cofactor. J Virol 69(3), 1612-20.
    Hu, W.Y., Myers, C.P., Kilzer, J.M., Pfaff, S.L. and Bushman, F.D. (2002) Inhibition of retroviral pathogenesis by RNA interference. Curr Biol 12(15), 1301-11.
    Hutvagner, G., McLachlan, J., Pasquinelli, A.E., Balint, E., Tuschl, T. and Zamore, P.D. (2001) A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA. Science 293(5531), 834-8.
    Hutvagner, G. and Zamore, P.D. (2002) A microRNA in a multiple-turnover RNAi enzyme complex. Science 297(5589), 2056-60.
    Isel, C. and Karn, J. (1999) Direct evidence that HIV-1 Tat stimulates RNA polymerase Ⅱ carboxyl-terminal domain hyperphosphorylation during transcriptional elongation. J Mol Biol 290(5), 929-41.
    Ishizuka, A., Siomi, M.C. and Siomi, H. (2002) A Drosophila fragile X protein interacts with components of RNAi and ribosomal proteins. Genes Dev 16(19), 2497-508.
    Jacque, J.M., Triques, K. and Stevenson, M. (2002) Modulation of HIV-1 replication by RNA interference. Nature 418(6896), 435-8.
    Jeffrey, P.D., Russo, A.A., Polyak, K., Gibbs, E., Hurwitz, J., Massague, J. and Pavletich, N.P. (1995) Mechanism of CDK activation revealed by the structure of a cyclinA-CDK2 complex. Nature 376(6538), 313-20.
    Jin, P., Zarnescu, D.C., Ceman, S., Nakamoto, M., Mowrey, J., Jongens, T.A., Nelson, D.L., Moses, K. and Warren, S.T. (2004) Biochemical and genetic interaction between the fragile X mental retardation protein and the microRNA pathway. Nat Neurosci 7(2), 113-7.
    Jones, K.A. (1997) Taking a new TAK on tat transactivation. Genes Dev 11(20), 2593-9.
    Kapadia, S.B., Brideau-Andersen, A. and Chisari, F.V. (2003) Interference of hepatitis C virus RNA replication by short interfering RNAs. Proc Natl Acad Sci U S A 100(4), 2014-8.
    Karn, J. (1999) Tackling Tat. J Mol Biol 293(2), 235-54.
    Kawasaki, H. and Taira, K. (2003) Short hairpin type of dsRNAs that are controlled by tRNA(Val) promoter significantly induce RNAi-mediated gene silencing in the cytoplasm of human cells. Nucleic Acids Res 31(2), 700-7.
    Kennedy, S., Wang, D. and Ruvkun, G. (2004) A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans. Nature 427(6975), 645-9.
    Kennerdell, J.R. and Carthew, R.W. (1998) Use of dsRNA-mediated genetic interference to demonstrate that frizzled and frizzled 2 act in the wingless pathway. Cell 95(7), 1017-26.
    Kerr, J.F., Wyllie, A.H. and Currie, A.R. (1972) Apoptosis: a basic biological phenomenon with wide-ranging implications in tissue kinetics. Br J Cancer 26(4), 239-57.
    Kestler, H.W., 3rd, Ringler, D.J., Mori, K., Panicali, D.L., Sehgal, P.K., Daniel, M.D. and Desrosiers, R.C. (1991) Importance of the nef gene for maintenance of high virus loads and for development of AIDS. Cell 65(4), 651-62.
    Kim, J., Krichevsky, A., Grad, Y., Hayes, G.D., Kosik, K.S., Church, G.M. and Ruvkun, G. (2004) Identification of many microRNAs that copurify with polyribosomes in mammalian neurons. Proc Natl Acad Sci U S A 101(1), 360-5.
    Kimura, K, Sasano, H., Shimosegawa, T., Mochizuki, S., Nagura, H. and Toyota, T. (2000) Ultrastructure of cells undergoing apoptosis. Vitam Horm 58, 257-66.
    King, R.W., Deshaies, R.J., Peters, J.M. and Kirschner, M.W. (1996) How proteolysis drives the cell cycle. Science 274(5293), 1652-9.
    Knight, S.W. and Bass, B.L. (2002) The role of RNA editing by ADARs in RNAi. Mol Cell 10(4), 809-17.
    Lahue, E.E., Smith, A.V. and Orr-Weaver, T.L. (1991) A novel cyclin gene from Drosophila complements CLN function in yeast. Genes Dev 5(12A), 2166-75.
    Laybourn, P.J. and Dahmus, M.E. (1989) Transcription-dependent structural changes in the C-terminal domain of mammalian RNA polymerase subunit IIa/o. J Biol Chem 264(12), 6693-8.
    Lee, M.T., Coburn, G.A., McClure, M.O. and Cullen, B.R. (2003a) Inhibition of human immunodeficiency virus type 1 replication in primary macrophages by using Tator CCR5-specific small interfering RNAs expressed from a lentivirus vector. J Virol 77(22), 11964-72.
    Lee, N.S., Dohjima, T., Bauer, G., Li, H., Li, M.J., Ehsani, A., Salvaterra, P. and Rossi, J. (2002a) Expression of small interfering RNAs targeted against HIV-1 rev transcripts in human cells. Nat Biotechnol 20(5), 500-5.
    Lee, Y., Ahn, C, Han, J., Choi, H., Kim, J., Yim, J., Lee, J., Provost, P., Radmark, O., Kim, S. and Kim, V.N. (2003b) The nuclear RNase Ⅲ Drosha initiates microRNA processing. Nature 425(6956), 415-9.
    Lee, Y., Jeon, K., Lee, J.T., Kim, S. and Kim, V.N. (2002b) MicroRNA maturation: stepwise processing and subcellular localization. Embo J 21(17), 4663-70.
    Lee, Y.S., Nakahara, K., Pham, J.W., Kim, K., He, Z., Sontheimer, E.J. and Carthew, R.W. (2004) Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways. Cell 117(1), 69-81.
    Lew, J., Huang, Q.Q., Qi, Z., Winkfein, R.J., Aebersold, R., Hunt, T. and Wang, J.H. (1994) A brain-specific activator of cyclin-dependent kinase 5. Nature 371(6496), 423-6.
    Li, H., Li, W.X. and Ding, S.W. (2002) Induction and suppression of RNA silencing by an animal virus. Science 296(5571), 1319-21.
    Li, W.X. and Ding, S.W. (2001) Viral suppressors of RNA silencing. Curr Opin Biotechnol 12(2), 150-4.
    Lingel, A., Simon, B., Izaurralde, E. and Sattler, M. (2004) Nucleic acid 3'-end recognition by the Argonaute2 PAZ domain. Nat Struct Mol Biol 11(6), 576-7.
    Liou, L.Y., Herrmann, C.H. and Rice, A.P. (2002) Transient induction of cyclin T1 during human macrophage differentiation regulates human immunodeficiency virus type 1 Tat transactivation function. J Virol 76(21), 10579-87.
    Liou, L.Y., Herrmann, C.H. and Rice, A.P. (2004) Human immunodeficiency virus type 1 infection induces cyclin T1 expression in macrophages. J Virol 78(15), 8114-9.
    Liu, J., Carmell, M.A., Rivas, F.V., Marsden, C.G., Thomson, J.M., Song, J.J., Hammond, S.M., Joshua-Tor, L. and Hannon, G.J. (2004) Argonaute2 is the catalytic engine of mammalian RNAi. Science 305(5689), 1437-41.
    Liu, Q., Rand, T.A., Kalidas, S., Du, R, Kim, H.E., Smith, D.P. and Wang, X. (2003) R2D2, a bridge between the initiation and effector steps of the Drosophila RNAi pathway. Science 301(5641), 1921-5.
    Lund, E., Guttinger, S., Calado, A., Dahlberg, J.E. and Kutay, U. (2004) Nuclear export of microRNA precursors. Science 303(5654), 95-8.
    Ma, J.B., Ye, K. and Patel, D.J. (2004) Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain. Nature 429(6989), 318-22.
    Marshall, N.F. and Price, D.H. (1992) Control of formation of two distinct classes of RNA polymerase II elongation complexes. Mol Cell Biol 12(5), 2078-90.
    Marshall, N.R and Price, D.H. (1995) Purification of P-TEFb, a transcription factor required for the transition into productive elongation. J Biol Chem 270(21), 12335-8.
    Martelli, A.M., Zweyer, M., Ochs, R.L., Tazzari, P.L., Tabellini, G., Narducci, P. and Bortul, R. (2001) Nuclear apoptotic changes: an overview. J Cell Biochem 82(4), 634-46.
    Martin-Serrano, J., Li, K. and Bieniasz, P.D. (2002) Cyclin Tl expression is mediated by a complex and constitutively active promoter and does not limit human immunodeficiency virus type 1 Tat function in unstimulated primary lymphocytes. J Virol 76(1), 208-19.
    Martinez, J., Patkaniowska, A., Urlaub, H., Luhrmann, R. and Tuschl, T. (2002a) Single-stranded antisense siRNAs guide target RNA cleavage in RNAi. Cell 110(5), 563-74.
    Martinez, J. and Tuschl, T. (2004) RISC is a 5' phosphomonoester-producing RNA endonuclease. Genes Dev 18(9), 975-80.
    Martinez, M.A., Gutierrez, A., Armand-Ugon, M., Blanco, J., Parera, M., Gomez, J., Clotet, B. and Este, J.A. (2002b) Suppression of chemokine receptor expression
     by RNA interference allows for inhibition of HIV-1 replication. Aids 16(18), 2385-90.
    McConkey, D.J. and Orrenius, S. (1997) The role of calcium in the regulation of apoptosis. Biochem Biophys Res Commun 239(2), 357-66.
    Meister, G., Landthalcr, M., Patkaniowska, A., Dorsett, Y., Teng, G. and Tuschl, T. (2004) Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs. Mol Cell 15(2), 185-97.
    Messmer, U.K. and Pfeilschifter, J. (2000) New insights into the mechanism for clearance of apoptotic cells. Bioessays 22(10), 878-81.
    Michaelson, J.S. and Leder, P. (2003) RNAi reveals anti-apoptotic and transcriptionally repressive activities of DAXX. J Cell Sci 116(Pt 2), 345-52.
    Morgan, D.O. (1995) Principles of CDK regulation. Nature 374(6518), 131-4.
    Morgan, D.O. (1997) Cyclin-dependent kinases: engines, clocks, and microprocessors. Annu Rev Cell Dev Biol 13, 261-91.
    Mourelatos, Z., Dostie, J., Paushkin, S., Sharma, A., Charroux, B., Abel, L., Rappsilber, J., Mann, M. and Dreyfuss, G. (2002) miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. Genes Dev 16(6), 720-8.
    Nagata, S. (2000) Apoptotic DNA fragmentation. Exp Cell Res 256(1), 12-8.
    Napoli, C, Lemieux, C. and Jorgensen, R. (1990) Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans. Plant Cell 2(4), 279-289.
    Nicoletti, I., Migliorati, G., Pagliacci, M.C., Grignani, F. and Riccardi, C. (1991) A rapid and simple method for measuring thymocyte apoptosis by propidium iodide staining and flow cytometry. J Immunol Methods 139(2), 271-9.
    Nishitsuji, H., Ikeda, T., Miyoshi, H., Ohashi, T., Kannagi, M. and Masuda, T. (2004) Expression of small hairpin RNA by lentivirus-based vector confers efficient and stable gene-suppression of HIV-1 on human cells including primary non-dividing cells. Microbes Infect 6(1), 76-85.
    Novina, C.D., Murray, M.F., Dykxhoorn, D.M., Beresford, P.J., Riess, J., Lee, S.K., Collman, R.G., Lieberman, J., Shankar, P. and Sharp, P.A. (2002) siRNA-directed inhibition of HIV-1 infection. Nat Med 8(7), 681-6.
    Nykanen, A., Haley, B. and Zamore, P.D. (2001) ATP requirements and small interfering RNA structure in the RNA interference pathway. Cell 107(3), 309-21.
    O'Keeffe, B., Fong, Y., Chen, D., Zhou, S. and Zhou, Q. (2000) Requirement for a kinase-specific chaperone pathway in the production of a Cdk9/cyclin T1 heterodimer responsible for P-TEFb-mediated tat stimulation of HIV-1 transcription. J Biol Chem 275(1), 279-87.
    Okamura, K., Ishizuka, A., Siomi, H. and Siomi, M.C. (2004) Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways. Genes Dev 18(14), 1655-66.
    Olsen, P.H. and Ambros, V. (1999) The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation. Dev Biol 216(2), 671-80.
    Park, W.S., Hayafune, M., Miyano-Kurosaki, N. and Takaku, H. (2003) Specific HIV-1 env gene silencing by small interfering RNAs in human peripheral blood mononuclear cells. Gene Ther 10(24), 2046-50.
    Park, W.S., Miyano-Kurosaki, N., Hayafune, M., Nakajima, E., Matsuzaki, T., Shimada, F. and Takaku, H. (2002) Prevention of HIV-1 infection in human peripheral blood mononuclear cells by specific RNA interference. Nucleic Acids Res 30(22), 4830-5.
    Park, W.S., Miyano-Kurosaki, N., Nakajima, E. and Takaku, H. (2001) Specific inhibition of HIV-1 gene expression by double-stranded RNA. Nucleic Acids Res Suppl(1), 219-20.
    Patrick, G.N., Zhou, P., Kwon, Y.T., Howley, P.M. and Tsai, L.H. (1998) p35, the neuronal-specific activator of cyclin-dependent kinase 5 (Cdk5) is degraded by the ubiquitin-proteasomc pathway. J Biol Chem 273(37), 24057-64.
    Peng, J., Marshall, N.F. and Price, D.H. (1998a) Identification of a cyclin subunit required for the function of Drosophila P-TEFb. J Biol Chem 273(22), 13855-60.
    Peng, J., Zhu, Y., Milton, J.T. and Price, D.H. (1998b) Identification of multiple cyclin subunits of human P-TEFb. Genes Dev 12(5), 755-62.
    Ping, Y.H. and Rana, T.M. (1999) Tat-associated kinase (P-TEFb): a component of transcription preinitiation and elongation complexes. J Biol Chem 274(11), 7399-404.
    Platt, N., da Silva, R.P. and Gordon, S. (1998) Recognizing death: the phagocytosis of apoptotic cells. Trends Cell Biol 8(9), 365-72.
    Provost, P., Dishart, D., Doucct, J., Frendewey, D., Samuelsson, B. and Radmark, O. (2002) Ribonuclease activity and RNA binding of recombinant human Dicer. Embo J 21(21), 5864-74.
    Pusch, O., Boden, D., Silbermann, R., Lee, F., Tucker, L. and Ramratnam, B. (2003) Nucleotide sequence homology requirements of HIV-1-specific short hairpin RNA. Nucleic Acids Res 31(22), 6444-9.
    Qin, X.F., An, D.S., Chen, I.S. and Baltimore, D. (2003) Inhibiting HIV-1 infection in human T cells by lentiviral-mediated delivery of small interfering RNA against CCR5. Proc Natl Acad Sci U S A 100(1), 183-8.
    Randall, G., Grakoui, A. and Rice, C.M. (2003) Clearance of replicating hepatitis C virus replicon RNAs in cell culture by small interfering RNAs. Proc Natl Acad Sci U S A 100(1), 235-40.
    Rechsteiner, M. and Rogers, S.W. (1996) PEST sequences and regulation by proteolysis. Trends Biochem Sci 21(7), 267-71.
    Reed, J.C. and Tomaselli, K.J. (2000) Drug discovery opportunities from apoptosis research. Curr Opin Biotechnol 11(6), 586-92.
    Reines, D., Conaway, J.W. and Conaway, R.C. (1996) The RNA polymerase Ⅱ general elongation factors. Trends Biochem Sci 21(9), 351-5.
    Rice, A.P. and Herrmann, C.H. (2003) Regulation of TAK/P-TEFb in CD4+ T lymphocytes and macrophages. Curr HIV Res 1(4), 395-404.
    Robertson, J.D., Orrenius, S. and Zhivotovsky, B. (2000) Review: nuclear events in apoptosis. J Struct Biol 129(2-3), 346-58.
    Roignant, J.Y., Carre, C, Mugat, B., Szymczak, D., Lepesant, J.A. and Antoniewski, C. (2003) Absence of transitive and systemic pathways allows cell-specific and isoform-specific RNAi in Drosophila. Rna 9(3), 299-308.
    Samson, M, Libert, F., Doranz, B.J., Rucker, J., Liesnard, C, Farber, C.M., Saragosti, S., Lapoumeroulie, C, Cognaux, J., Forceille, C, Muyldermans, G., Verhofstede, C, Burtonboy, G., Georges, M., Imai, T., Rana, S., Yi, Y., Smyth, R.J., Collman, R.G., Doms, R.W., Vassart, G. and Parmentier, M. (1996) Resistance to HIV-1 infection in Caucasian individuals bearing mutant alleles of the CCR-5 chemokine receptor gene. Nature 382(6593), 722-5.
    Sasaki, T., Shiohama, A., Minoshima, S. and Shimizu, N. (2003) Identification of eight members of the Argonaute family in the human genome small star, filled. Genomics 82(3), 323-30.
    Savill, J. (2000) Apoptosis in resolution of inflammation. Kidney Blood Press Res 23(3-5), 173-4.
    Schwarz, D.S., Hutvagner, G., Haley, B. and Zamore, P.D. (2002) Evidence that siRNAs function as guides, not primers, in the Drosophila and human RNAi pathways. Mol Cell 10(3), 537-48.
    Schwarz, D.S., Tomari, Y. and Zamore, P.D. (2004) The RNA-induced silencing complex is a Mg2+-dependent endonuclease. Curr Biol 14(9), 787-91.
    Seggerson, K., Tang, L. and Moss, E.G. (2002) Two genetic circuits repress the Caenorhabditis elegans heterochronic gene lin-28 after translation initiation. Dev Biol 243(2), 215-25.
    Sharp, P.A. and Zamore, P.D. (2000) Molecular biology. RNA interference. Science 287(5462), 2431-3.
    Shlomai, A. and Shaul, Y. (2003) Inhibition of hepatitis B virus expression and replication by RNA interference. Hepatology 37(4), 764-70.
    Sijen, T., Fleenor, J., Simmer, F., Thijssen, K.L., Parrish, S., Timmons, L., Plasterk, R.H. and Fire, A. (2001) On the role of RNA amplification in dsRNA-triggered gene silencing. Cell 107(4), 465-76.
    Simmer, F., Tijsterman, M., Parrish, S., Koushika, S.P., Nonet, M.L., Fire, A., Ahringer, J. and Plasterk, R.H. (2002) Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi. Curr Biol 12(15), 1317-9.
    Song, J.J., Smith, S.K., Hannon, G.J. and Joshua-Tor, L. (2004) Crystal structure of Argonaute and its implications for RISC slicer activity. Science 305(5689), 1434-7.
    Stein, P., Svoboda, P., Anger, M. and Schultz, R.M. (2003) RNAi: mammalian oocytes do it without RNA-dependent RNA polymerase. Rna 9(2), 187-92.
    Surabhi, R.M. and Gaynor, R.B. (2002) RNA interference directed against viral and cellular targets inhibits human immunodeficiency Virus Type 1 replication. J Virol 76(24), 12963-73.
    Tahbaz, N., Kolb, F.A., Zhang, H., Jaronczyk, K., Filipowicz, W. and Hobman, T.C. (2004) Characterization of the interactions between mammalian PAZ PIWI domain proteins and Dicer. EMBO Rep 5(2), 189-94.
    Tata, J.R. (1966) Requirement for RNA and protein synthesis for induced regression of the tadpole tail in organ culture. Dev Biol 13(1), 77-94.
    Taube, R., Fujinaga, K., Wimmer, J., Barboric, M. and Peterlin, B.M. (1999) Tat transactivation: a model for the regulation of eukaryotic transcriptional elongation. Virology 264(2), 245-53.
    Tonkin, L.A. and Bass, B.L. (2003) Mutations in RNAi rescue aberrant chemotaxis of ADAR mutants. Science 302(5651), 1725.
    Tuschl, T., Zamore, P.D., Lehmann, R., Bartel, D.P. and Sharp, P.A. (1999) Targeted mRNA degradation by double-stranded RNA in vitro. Genes Dev 13(24), 3191-7.
    Uptain, S.M., Kane, C.M. and Chamberlin, M.J. (1997) Basic mechanisms of transcript elongation and its regulation. Annu Rev Biochem 66,117-72.
    Vargason, J.M., Szittya, G., Burgyan, J. and Tanaka Hall, T.M. (2003) Size selective recognition of siRNA by an RNA silencing suppressor. Cell 115(7), 799-811.
    Vodicka, M.A., Goh, W.C, Wu, L.I., RogeJ, M.E., Bartz, S.R., Schweickart, V.L., Raport, C.J. and Emerman, M. (1997) Indicator cell lines for detection of primary strains of human and simian immunodeficiency viruses. Virology 233(1), 193-8.
    Voinnet, O. (2001) RNA silencing as a plant immune system against viruses. Trends Genet 17(8), 449-59.
    Wada, T., Takagi, T., Yamaguchi, Y., Ferdous, A., Imai, T., Hirose, S., Sugimoto, S., Yano, K., Hartzog, G.A., Winston, F., Buratowski, S. and Handa, H. (1998) DSIF,
     a novel transcription elongation factor that regulates RNA polymerase Ⅱ processivity, is composed of human Spt4 and Spt5 homologs. Genes Dev 12(3), 343-56.
    Wassenegger, M. and Pelissier, T. (1998) A model for RNA-mediated gene silencing in higher plants. Plant Moi Biol 37(2), 349-62.
    Waterhouse, P.M., Wang, M.B. and Finnegan, E.J. (2001) Role of short RNAs in gene silencing. Trends Plant Sci 6(7), 297-301.
    Wei, P., Garber, M.E., Fang, S.M., Fischer, W.H. and Jones, K.A. (1998) A novel CDK9- associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA. Cell 92(4), 451-62.
    Wianny, F. and Zernicka-Goetz, M. (2000) Specific interference with gene function by double-stranded RNA in early mouse development. Nat Cell Biol 2(2), 70-5.
    Williams, R.W. and Rubin, G.M. (2002) ARGONAUTE1 is required for efficient RNA interference in Drosophila embryos. Proc Natl Acad Sci U S A 99(10), 6889-94.
    Wilson, J.A., Jayasena, S., Khvorova, A., Sabatinos, S., Rodrigue-Gervais, I.G., Arya, S., Sarangi, F., Harris-Brandts, M., Beaulieu, S. and Richardson, C.D. (2003) RNA interference blocks gene expression and RNA synthesis from hepatitis C replicons propagated in human liver cells. Proc Natl Acad Sci U S A 100(5), 2783-8.
    Xie, Z., Johansen, L.K., Gustafson, A.M., Kasschau, K.D., Lellis, A.D., Zilberman, D., Jacobsen, S.E. and Carrington, J.C. (2004) Genetic and functional diversification of small RNA pathways in plants. PLoS Biol 2(5), E104.
    Xie, Z. and Price, D. (1997) Drosophila factor 2, an RNA polymerase Ⅱ transcript release factor, has DNA-dependent ATPase activity. J Biol Chem 272(50), 31902-7.
    Xie, Z. and Price, D.H. (1996) Purification of an RNA polymerase Ⅱ transcript release factor from Drosophila. J Biol Chem 271(19), 11043-6.
    Xie, Z. and Price, D.H. (1998) Unusual nucleic acid binding properties of factor 2, an RNA polymerase Ⅱ transcript release factor. J Biol Chem 273(6), 3771-7.
    Yamamoto, T., Omoto, S., Mizuguchi, M., Mizukami, H., Okuyama, H., Okada, N., Saksena, N.K., Brisibe, E.A., Otake, K. and Fuji, Y.R. (2002) Double-stranded nef RNA interferes with human immunodeficiency virus type 1 replication. Microbiol Immunol 46(11), 809-17.
    104
    Yang, D., Lu, H. and Erickson, J.W. (2000) Evidence that processed small dsRNAs may mediate sequence-specific mRNA degradation during RNAi in Drosophila embryos. Curr Biol 10(19), 1191-200.
    Yang, X., Gold, M.O., Tang, D.N., Lewis, D.E., Aguilar-Cordova, E., Rice, A.P. and Herrmann, C.H. (1997) TAK, an HIV Tat-associated kinase, is a member of the cyclin-dependent family of protein kinases and is induced by activation of peripheral blood lymphocytes and differentiation of promonocytic cell lines. Proc Natl Acad Sci U S A 94(23), 12331-6.
    Ye, K., Malinina, L. and Patel, D.J. (2003) Recognition of small interfering RNA by a viral suppressor of RNA silencing. Nature 426(6968), 874-8.
    Zeng, Y. and Cullen, B.R. (2004) Structural requirements for pre-microRNA binding and nuclear export by Exportin 5. Nucleic Acids Res 32(16), 4776-85.
    Zhang, H., Kolb, F.A., Brondani, V., Billy, E. and Filipowicz, W. (2002) Human Dicer preferentially cleaves dsRNAs at their termini without a requirement for ATP. Embo J 21(21), 5875-85.
    Zhang, J.H. and Xu, M. (2000) DNA fragmentation in apoptosis. Cell Res 10(3), 205-11.
    Zhao, L.J., Jian, H. and Zhu, H. (2003) Specific gene inhibition by adenovirus-mediated expression of small interfering RNA. Gene 316,137-41.
    Zhu, Y., Pe'ery, T., Peng, J., Ramanathan, Y., Marshall, N., Marshall, T., Amendt, B., Mathews, M.B. and Price, D.H. (1997) Transcription elongation factor P-TEFb is required for HIV-1 tat transactivation in vitro. Genes Dev 11(20), 2622-32.

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