作者：Ohgew Kweon (1)
Seong-Jae Kim (1)
Jochen Blom (2)
Sung-Kwan Kim (3)
Bong-Soo Kim (4)
Dong-Heon Baek (5)
Su Inn Park (6)
John B Sutherland (1)
Carl E Cerniglia (1)

1. Division of Microbiology ; National Center for Toxicological Research/FDA ; Jefferson ; Arkansas ; USA
2. Center for Biotechnology ; Bielefeld University ; Bielefeld ; Nordrhein-Westfalen ; Germany
3. Department of Management ; University of Arkansas at Little Rock ; Little Rock ; Arkansas ; USA
4. Department of Life Science ; Hallym University ; Chuncheon ; Gangwon-do ; 200-702 ; Republic of Korea
5. Department of Oral Microbiology and Immunology ; School of Dentistry ; Dankook University ; Chonan ; Republic of Korea
6. Department of Computer Science and Engineering ; Texas A&M University ; College Station ; Texas ; USA

关键词：Mycobacterium ; PAH metabolism ; Pan ; genome ; Functional genomics ; Functional pan ; genome ; Phenotype network ; Evolution ; Epistasis ; Pleiotropy

刊名：BMC Evolutionary Biology

出版年：2015

作者：Sunjin Moon (1) (12) (2)
Tae-Hun Kim (3)
Kyung-Tai Lee (3)
Woori Kwak (4) (5)
Taeheon Lee (1)
Si-Woo Lee (3)
Myung-Jick Kim (6)
Kyuho Cho (7)
Namshin Kim (8)
Won-Hyong Chung (8)
Samsun Sung (5)
Taesung Park (9)
Seoae Cho (5)
Martien AM Groenen (10)
Rasmus Nielsen (11)
Yuseob Kim (2)
Heebal Kim (1) (4) (5)

1. Department of Agricultural biotechnology ; Seoul National University ; Seoul ; 151-921 ; Republic of Korea
12. Current address ; Department of Genome Sciences ; University of Washington ; Seattle ; WA ; USA
2. Department of Life Science and Division of EcoScience ; Ewha Womans University ; Seoul ; 120-750 ; Republic of Korea
3. Animal Genomics and Bioinformatics Division ; National Institute of Animal Science ; Rural Development Administration ; Suwon ; 441-706 ; Republic of Korea
4. Interdisciplinary Program in Bioinformatics ; Seoul National University ; Seoul ; 151-747 ; Republic of Korea
5. C&K Genomics ; Seoul National University Research Park ; Seoul ; 151-919 ; Republic of Korea
6. Animal Genetic Resources Station ; National Institute of Animal Science ; Rural Development Administration ; Suwon ; 441-706 ; Republic of Korea
7. Swine Science Division ; National Institute of Animal Science ; Rural Development Administration ; Suwon ; 441-706 ; Republic of Korea
8. Korean Bioinformation Center ; Korea Research Institute of Bioscience and Biotechnology ; Daejeon ; 305-806 ; Republic of Korea
9. Department of Statistics ; Seoul National University ; Seoul ; Republic of Korea
10. Animal Breeding and Genomics Centre ; Wageningen University ; De Elst 1 ; 6708 WD ; Wageningen ; The Netherlands
11. Department of Integrative Biology and Department of Statistics ; University of California Berkeley ; Berkeley ; CA ; 94820 ; USA

关键词：Pig ; Domestication ; Selective sweep ; Directional selection ; Quantitative traits

刊名：BMC Genomics

出版年：2015

作者：Jeong-An Gim (1)
Sugi Lee (2)
Dae-Soo Kim (3)
Kwang-Seuk Jeong (1) (4)
Chang Pyo Hong (5)
Jin-Han Bae (6)
Jae-Woo Moon (5)
Yong-Seok Choi (2)
Byung-Wook Cho (7)
Hwan-Gue Cho (8)
Jong Bhak (5)
Heui-Soo Kim (1)

1. Department of Biological Sciences ; College of Natural Sciences ; Pusan National University ; Busan ; 609-735 ; Republic of Korea
2. Department of Statistics ; College of Natural Sciences ; Pusan National University ; Busan ; 609-735 ; Republic of Korea
3. Genome Resource Center ; Korea Research Institute of Bioscience and Biotechnology (KRIBB) ; 111 Gwahangno ; Yuseong-gu ; Daejeon ; 305-806 ; Republic of Korea
4. Institute of Environmental Technology & Industry ; Pusan National University ; Busan ; 609-735 ; Republic of Korea
5. TBI ; Theragen BiO Institute ; Theragen Etex ; Suwon ; 443-270 ; Republic of Korea
6. Research Center ; Dongnam Institute of Radiological and Medical Sciences (DIRAMS) ; Busan ; Republic of Korea
7. Department of Animal Science ; College of Life Sciences ; Pusan National University ; Miryang ; 627-702 ; Republic of Korea
8. School of Computer Science and Engineering ; College of Engineering ; Pusan National University ; Busan ; 609-735 ; Republic of Korea

关键词：Thoroughbred horse ; Exercise ; Differentially methylated region ; Transposable element ; MeDIP ; Seq

刊名：Genes & Genomics

出版年：2015

作者：Doori Park (1)
Je Won Jung (1)
Beom-Soon Choi (2)
Murukarthick Jayakodi (3)
Jeongsoo Lee (2)
Jongsung Lim (2)
Yeisoo Yu (4)
Yong-Soo Choi (5)
Myeong-Lyeol Lee (5)
Yoonseong Park (6)
Ik-Young Choi (2)
Tae-Jin Yang (3)
Owain R Edwards (7)
Gyoungju Nah (3)
Hyung Wook Kwon (1)

1. Biomodulation Major ; Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences ; College of Agriculture and Life Sciences ; Seoul National University ; Seoul ; 151-921 ; Republic of Korea
2. National Instrumentation Center for Environmental Management ; College of Agriculture and Life Sciences ; Seoul National University ; Seoul ; 151-742 ; Republic of Korea
3. Department of Plant Science ; College of Agriculture and Life Sciences ; Seoul National University ; Seoul ; 151-921 ; Republic of Korea
4. Arizona Genomics Institute ; University of Arizona ; Tucson ; Arizona ; 85721 ; USA
5. National Institute of Agricultural Biotechnology ; Rural development Administration ; Suwon ; 441-707 ; Republic of Korea
6. Department of Entomology ; Kansas State University ; Manhattan ; Kansas ; USA
7. CSIRO Ecosystem Sciences ; Centre for Environment and Life Sciences ; Underwood Avenue ; Floreat ; WA ; 6014 ; Australia

关键词：Apis cerana ; Asian honey bee ; Genome ; Social insect ; Chemosensory receptors ; Honey bee immunity

刊名：BMC Genomics

出版年：2015

作者：Leif Andersson (1) (2)
Alan L Archibald (3)
Cynthia D Bottema (4)
Rudiger Brauning (5)
Shane C Burgess (6)
Dave W Burt (3)
Eduardo Casas (7)
Hans H Cheng (8)
Laura Clarke (9)
Christine Couldrey (10)
Brian P Dalrymple (11)
Christine G Elsik (12)
Sylvain Foissac (13)
Elisabetta Giuffra (14)
Martien A Groenen (15)
Ben J Hayes (16) (17) (18)
LuSheng S Huang (19)
Hassan Khatib (20)
James W Kijas (11)
Heebal Kim (21)
Joan K Lunney (22)
Fiona M McCarthy (23)
John C McEwan (24)
Stephen Moore (25)
Bindu Nanduri (26)
Cedric Notredame (27)
Yniv Palti (28)
Graham S Plastow (29)
James M Reecy (30)
Gary A Rohrer (31)
Elena Sarropoulou (32)
Carl J Schmidt (33)
Jeffrey Silverstein (34)
Ross L Tellam (35)
Michele Tixier-Boichard (14)
Gwenola Tosser-Klopp (13)
Christopher K Tuggle (30)
Johanna Vilkki (36)
Stephen N White (37) (38)
Shuhong Zhao (39)
Huaijun Zhou (40)
The FAANG Consortium

1. Science for Life Laboratory Uppsala ; Department of Medical Biochemistry and Microbiology ; Uppsala University ; Uppsala ; SE 751 23 ; Sweden
2. Department of Animal Breeding and Genetics ; Swedish University of Agricultural Sciences ; Uppsala ; SE-750 07 ; Sweden
3. The Roslin Institute and Royal (Dick) School of Veterinary Studies ; University of Edinburgh ; Edinburgh ; EH25 9RG ; UK
4. School of Animal and Veterinary Sciences ; The University of Adelaide ; Roseworthy ; SA ; 5371 ; Australia
5. Invermay Agricultural Centre ; AgResearch Limited ; Mosgiel ; 9053 ; New Zealand
6. College of Agriculture and Life Sciences ; University of Arizona ; Tucson ; AZ ; 85719 ; USA
7. National Animal Disease Center ; United States Department of Agriculture ; Agricultural Research Service ; Ames ; IA ; 50010 ; USA
8. Avian Disease and Oncology Laboratory ; United States Department of Agriculture ; Agricultural Research Service ; East Lansing ; MI ; 48823 ; USA
9. European Molecular Biology Laboratory European Bioinformatics Institute ; Hinxton ; Cambridge ; CB10 1SD ; UK
10. Livestock Improvement Corporation ; Hamilton ; 3284 ; New Zealand
11. Agriculture Flagship ; Commonwealth Scientific and Industrial Research Organisation ; St Lucia ; 4067 ; Brisbane ; Australia
12. Division of Animal Sciences ; University of Missouri ; Columbia ; MO ; 65211 ; USA
13. UMR1388 G茅n茅tique ; Physiologie et Syst猫mes d鈥橢levage (GenPhySE) ; French National Institute for Agricultural Research (INRA) ; F-31326 ; Castanet-Tolosan ; France
14. UMR1313 G茅n茅tique Animale et Biologie Int茅grative (GABI) ; French National Institute for Agricultural Research (INRA) ; F-78352 ; Jouy-en-Josas ; France
15. Animal Breeding and Genomics Centre ; Wageningen University ; 6708聽PB ; Wageningen ; The Netherlands
16. Biosciences Research Division ; Department of Environment and Primary Industries Victoria ; Bundoora ; 3083 ; Australia
17. Dairy Futures Cooperative Research Centre ; Bundoora ; 3083 ; VIC ; Australia
18. La Trobe University ; Bundoora ; 3086 ; VIC ; Australia
19. Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China ; Jiangxi Agricultural University ; Jiangxi ; 330029 ; People鈥檚 Republic of China
20. Department of Animal Sciences ; University of Wisconsin-Madison ; Madison ; WI ; 53706 ; USA
21. Department of Agricultural Biotechnology ; Seoul National University ; Seoul ; Republic of Korea
22. Animal Parasitic Diseases Laboratory ; United States Department of Agriculture ; Agricultural Research Service ; Beltsville ; MD ; 20705 ; USA
23. School of Animal and Comparative Biomedical Sciences ; University of Arizona ; Tucson ; AZ ; 85721 ; USA
24. Animal Productivity Group ; AgResearch Limited ; Mosgiel ; 9053 ; New Zealand
25. Centre for Animal Science ; Queensland Alliance for Agriculture & Food Innovation ; University of Queensland ; St Lucia ; QLD ; 4067 ; Australia
26. Department of Basic Sciences ; College of Veterinary Medicine and Institute for Genomics ; Biocomputing and Biotechnology ; Mississippi State University ; Mississippi ; MS ; 39762 ; USA
27. Comparative Bioinformatics ; Centre for Genomic Regulation (CRG) ; Dr. Aiguader 88 ; 08003 ; Barcelona ; Spain
28. National Center for Cool and Cold Water Aquaculture ; United States Department of Agriculture ; Agricultural Research Service ; Kearneysville ; WV ; 25430 ; USA
29. Livestock Gentec Centre ; Department of Agricultural ; Food and Nutritional Science ; University of Alberta ; Edmonton ; Alberta ; T6G 2C8 ; Canada
30. Department of Animal Science ; Iowa State University ; Ames ; IA ; 50011 ; USA
31. US Meat Animal Research Center ; United States Department of Agriculture ; Agricultural Research Service ; Clay Center ; NE ; 68933 ; USA
32. Institute of Marine Biology ; Biotechnology and Aquaculture ; Hellenic Centre for Marine Research ; 71003 ; Heraklion ; Greece
33. Department of Animal and Food Sciences ; University of Delaware ; Newark ; DE ; 19716 ; USA
34. Animal Production and Protection ; United States Department of Agriculture ; Agricultural Research Service Aquaculture ; Beltsville ; MD ; 20705 ; USA
35. CSIRO Agriculture ; Commonwealth Scientific and Industrial Research Organisation ; St Lucia ; 4067 ; Australia
36. Green Technology ; Natural Resources Institute Finland ; 31600 ; Jokioinen ; Finland
37. Animal Disease Research Unit ; United States Department of Agriculture ; Agricultural Research Service ; Pullman ; WA ; 99164-6630 ; USA
38. Department of Veterinary Microbiology and Pathology ; Washington State University ; Pullman ; WA ; 99164-7040 ; USA
39. Key Laboratory of Agricultural Animal Genetics ; Breeding and Reproduction of Ministry of Education of China ; Huazhong Agricultural University ; Wuhan ; Hubei ; 430070 ; People鈥檚 Republic of China
40. Department of Animal Science ; University of California ; Davis ; CA ; 95616 ; USA

刊名：Genome Biology

出版年：2015

作者：Yonsik Kwak (1) (2)
Yun-ji Kim (1) (2)
Jinchuan Xing (3) (4)
Kyudong Han (1) (2)

1. Department of Nanobiomedical Science & BK21 PLUS NBM Global Research Center for Regenerative Medicine ; Dankook University ; Cheonan ; 330-714 ; Republic of Korea
2. DKU-Theragen Institute for NGS Analysis (DTiNa) ; Cheonan ; 330-714 ; Republic of Korea
3. Department of Genetics ; Rutgers ; The State University of New Jersey ; Piscataway ; NJ ; 08854 ; USA
4. Human Genetics Institute of New Jersey ; Rutgers ; The State University of New Jersey ; Piscataway ; NJ ; 08854 ; USA

关键词：SVA element ; SVA2 element ; Primate ; Evolutionary history

刊名：Genes & Genomics

出版年：2015

作者：Ja-Rang Lee (41)
Chang Pyo Hong (42)
Jae-Woo Moon (42)
Yi-Deun Jung (41)
Dae-Soo Kim (43)
Tae-Hyung Kim (42)
Jeong-An Gim (41)
Jin-Han Bae (41)
Yuri Choi (41)
Jungwoo Eo (41)
Yun-Jeong Kwon (41)
Sanghoon Song (42)
Junsu Ko (42)
Young Mok Yang (44)
Hak-Kyo Lee (45)
Kyung-Do Park (45)
Kung Ahn (42)
Kyoung-Tag Do (45)
Hong-Seok Ha (46)
Kyudong Han (47)
Joo Mi Yi (48)
Hee-Jae Cha (49)
Byung-Wook Cho (41)
Jong Bhak (42)
Heui-Soo Kim (41)

41. Department of Biological Sciences ; College of Natural Sciences ; Pusan National University ; Busan ; 609-735 ; Republic of Korea
42. TBI ; Theragen BiO Institute ; TheragenEtex ; Suwon ; 443-270 ; Republic of Korea
43. Genome Resource Center ; Korea Research Institute of Bioscience and Biotechnology (KRIBB) ; 111 Gwahangno ; Yuseong-gu ; Daejeon ; 305-806 ; Republic of Korea
44. Department of Pathology ; School of Medicine ; Institute of Biomedical Science and Technology ; Konkuk University ; Seoul ; 143-701 ; Republic of Korea
45. Department of Biotechnology ; Hankyong National University ; Anseong ; 456-749 ; Republic of Korea
46. Department of Genetics ; Human Genetics Institute of New Jersey ; Rutgers ; the State University of New Jersey ; 145 Bevier Rd ; Piscataway ; NJ ; 08854 ; USA
47. Department of Nanobiomedical Science and WCU Research Center ; Dankook University ; Cheonan ; 330-714 ; Republic of Korea
48. Research Center ; Dongnam Institute of Radiological & Medical Sciences (DIRAMS) ; Jwadong-gil 40 ; Jangan-eup ; Gijang-gun ; Busan ; 619-950 ; Republic of Korea
49. Department of Parasitology and Genetics ; Kosin University College of Medicine ; Busan ; 602-703 ; Republic of Korea

关键词：Thoroughbred horse ; Jeju horse ; Genome ; wide DNA methylation ; Differential methylated region (DMR) ; MeDIP ; seq

刊名：BMC Genomics

出版年：2014

作者：Taemook Kim (2)
Wooseok Lee (2) (3)
Kyudong Han (2) (3)
Keunsoo Kang (1)

2. Department of Nanobiomedical Science & BK21 PLUS NBM Global Research Center for Regenerative Medicine ; Dankook University ; Cheonan ; 330-714 ; Republic of Korea
3. DKU-Theragen Institute for NGS Analysis (DTiNa) ; Cheonan ; 330-714 ; Republic of Korea
1. Department of Microbiology ; Dankook University ; Cheonan ; 330-714 ; Republic of Korea

关键词：AutoChIP ; ChIP ; seq ; STAT5 ; GATA3 ; Next ; generation sequencing ; NGS

刊名：Genes & Genomics

出版年：2015

作者：Tapan Kumar Mohanta (1)
Pankaj Kumar Arora (1)
Nibedita Mohanta (2)
Pratap Parida (3)
Hanhong Bae (1)

1. School of Biotechnology ; Yeungnam University ; Daehak Gyeongsan ; Gyeonsangbook ; 712749 ; Republic of Korea
2. Department of Biotechnology ; North Orissa University ; Sri Ramchandra Vihar ; Takatpur ; Baripada ; Mayurbhanj ; Orissa ; 757003 ; India
3. Center for Studies in Biotechnology ; Dibrugarh University ; Dibrugarh ; Assam ; 786004 ; India

关键词：Mitogen activated protein kinase (MAPK) ; Activation loop ; Conserved motifs ; Orthologs ; Paralogs ; Phylogeny ; Evolution

刊名：BMC Genomics

出版年：2015

作者：Yongsik Kwak (1) (2)
Yun-ji Kim (1) (2)
Jinchuan Xing (3) (4)
Kyudong Han (1) (2)

1. Department of Nanobiomedical Science & BK21 PLUS NBM Global Research Center for Regenerative Medicine ; Dankook University ; Cheonan ; 330-714 ; Republic of Korea
2. DKU-Theragen Institute for NGS Analysis (DTiNa) ; Cheonan ; 330-714 ; Republic of Korea
3. Department of Genetics ; Rutgers ; The State University of New Jersey ; Piscataway ; NJ ; 08854 ; USA
4. Human Genetics Institute of New Jersey ; Rutgers ; The State University of New Jersey ; Piscataway ; NJ ; 08854 ; USA

刊名：Genes & Genomics

出版年：2015