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1.Body composition and metabolic outcomes after 96 weeks of treatment with ritonavir-boosted lopinavir plus either nucleoside or nucleotide reverse transcriptase inhibitors or raltegravir in patients with HIV with virological failure of a standard first-line antiretroviral therapy regimen: a substudy of the randomised, open-label, non-inferiority SEC

作者：Prof Mark A Boyd ; MD^a ; ^b ; ^{mark.boyd@adelaide.edu.au} ; Janaki Amin ; PhD^b ; Patrick W G Mallon ; PhD^c ; Nagalingeswaran Kumarasamy ; MD^d ; Johan Lombaard ; MD^e ; Prof Robin Wood ; PhD^f ; Prof Ploenchan Chetchotisakd ; MD^g ; Prof Praphan Phanuphak ; PhD^h ; Lerato Mohapi ; MDⁱ ; Iskandar Azwa ; MD^j ; Waldo H Belloso ; MD^k ; Prof Jean-Michel Molina ; PhD^l ; Prof Jennifer Hoy ; MD^m ; Cecilia L Moore ; MIPH^b ; Prof Sean Emery ; PhD^b ; Prof David A Cooper ; FAA^b ; on behalf of the SECOND-LINE Study Group^&dagger ;

刊名：The Lancet HIV

出版年：2017

2.Development and application of KASP marker for high throughput detection of AhFAD2 mutation in peanut

作者：Shuzhen Zhao ; Aiqin Li ; Changsheng Li ; Han Xia ; Chuanzhi Zhao ; Ye Zhang ; Lei Hou ; Xingjun Wang ; ^{xingjunw@hotmail.com}

关键词：Arachis hypogaea ; Fatty acid desaturase ; High oleic acid ; Kompetitive allele specific PCR ; Linoleic acid ; Marker assisted selection ; Molecular breeding ; Mutation in peanut ; Nucleotide substitution ; Oilseed crop ; Peanut oil

刊名：Electronic Journal of Biotechnology

出版年：2017

3.High-resolution characterization of the human microbiome

作者：Cecilia Noecker^a ; Colin P. McNally^a ; Alexander Eng^a ; Elhanan Borenstein^a ; ^b ; ^c ; ^elbo@uw.edu

关键词：CNV ; copy number variation ; FISH ; fluorescent in situ hybridization ; HMM ; hidden Markov model ; KEGG ; Kyoto Encyclopedia of Genes and Genomes ; LCA ; lowest common ancestor ; OTU ; operational taxonomic unit ; rRNA ; ribosomal RNA ; SNP ; single-nucleotide polymorphism

刊名：Translational Research

出版年：2017

4.Parallel reaction monitoring of clinical Mycobacterium tuberculosis lineages reveals pre-existent markers of rifampicin tolerance in the emerging Beijing lineage

作者：Jeroen de Keijzer^a ; ^{j.de_keijzer@lumc.nl" class="auth_mail" title="E-mail the corresponding author} ; Arnout Mulder^b ; Arnoud H. de Ru^a ; ^c ; Dick van Soolingen^b ; ^d ; ¹ ; Peter A. van Veelen^a ; ^c ; ¹

关键词：CAS ; Central Asian strains ; DDA ; data dependent acquisition ; EAI ; East-African Indian ; FDR ; false discovery rate ; FASP ; filter aided sample preparation ; MIC ; minimal inhibitory concentration ; MDR-TB ; multidrug resistant tuberculosis ; MGIT ; mycobacterial growth indicator tube ; MIRU ; mycobacterial interspersed repeat units ; nsSNP ; non synonymous single nucleotide polymorphisms ; PRM ; parallel reaction monitoring ; RRDR ; rifampicin resistance determining region ; SIL ; stable isotopically labelled ; SCX

刊名：Journal of Proteomics

出版年：2017

5.Intratumoral and Intertumoral Genomic Heterogeneity of Multifocal Localized Prostate Cancer Impacts Molecular Classifications and Genomic Prognosticators

作者：Lei Wei^a ; ^&dagger ; ; Jianmin Wang^a ; ^&dagger ; ; Erika Lampert^b ; Simon Schlanger^b ; Adam D. DePriest^c ; Qiang Hu^a ; Eduardo Cortes Gomez^a ; Mitsuko Murakam^a ; Sean T. Glenn^c ; Jeffrey Conroy^d ; Carl Morrison^e ; Gissou Azabdaftari^e ; James L. Mohler^f ; Song Liu^a ; ^&Dagger ; ; Hannelore V. Heemers^b ; ^g ; ^h ; ^&Dagger ; ; ^{heemerh@ccf.org}

关键词：Prostatic adenocarcinoma ; Androgen deprivation therapy ; Castration ; Radiation therapy ; Somatic alterations ; Active surveillance ; Indolent ; Personalized medicine ; Actionable target

刊名：European Urology

出版年：2017

6.Identifying 2′-O-methylationation sites by integrating nucleotide chemical properties and nucleotide compositions

作者：Wei Chen^a ; ^{chenweiimu@gmail.com" class="auth_mail" title="E-mail the corresponding author} ; Pengmian Feng^b ; Hua Tang^c ; Hui Ding^d ; Hao Lin^d ; ^{hlin@uestc.edu.cn" class="auth_mail" title="E-mail the corresponding author}

关键词：2&prime ; -O-methylationation ; Nucleotide chemical property ; Nucleotide composition ; Support vector machine

刊名：Genomics

出版年：2016

7.Associations between a fatty acid desaturase gene polymorphism and blood arachidonic acid compositions in Japanese elderly

作者：Sayaka Horiguchi^a ; ^{hsa101@eiyo.ac.jp" class="auth_mail" title="E-mail the corresponding author} ; Kazuhiro Nakayama^b ; Sadahiko Iwamoto^b ; Akiko Ishijima^c ; Takayuki Minezaki^c ; Mamiko Baba^c ; Yoshiko Kontai^d ; Chika Horikawa^e ; Hiroshi Kawashima^e ; Hiroshi Shibata^e ; Yasuo Kagawa^a ; Terue Kawabata^a

关键词：ALA ; α-linolenic acid ; ARA ; arachidonic acid ; BMI ; body mass index ; DGLA ; dihomo-γ-linolenic acid ; DHA ; docosahexaenoic acid ; EPA ; eicosapentaenoic acid ; ETA ; eicosatetraenoic acid ; FADS ; fatty acid desaturase ; GLA ; γ-linolenic acid ; LA ; linoleic acid ; LCPUFA ; long chain polyunsaturated fatty acid ; PL ; phospholipid ; SNP ; single nucleotide polymorphism

刊名：Prostaglandins, Leukotrienes and Essential Fatty Acids

出版年：2016

8.Compositional data analysis of the microbiome: fundamentals, tools, and challenges

作者：Matthew C.B. Tsilimigras ; Anthony A. Fodor ; PhD ; ^{anthony.fodor@gmail.com" class="auth_mail" title="E-mail the corresponding author}

关键词：Metagenomics ; Data interpretation ; statistical ; Microbiota ; RNA ; Ribosomal ; 16S ; Statistics as topic ; Selection bias ; High-throughput nucleotide sequencing

刊名：Annals of Epidemiology

出版年：2016

9.HaploSNP affinities and linkage map positions illuminate subgenome composition in the octoploid, cultivated strawberry (Fragaria × ananassa)

作者：D.J. Sargent^a ; ¹ ; Y. Yang^b ; ¹ ; N. &Scaron ; urbanovski^a ; L. Bianco^a ; M. Buti^a ; R. Velasco^a ; L. Giongo^a ; T.M. Davis^b

关键词：AFLP ; amplified fragment length polymorphisms ; CBT ; call rate below threshold ; Fvb ; Fragaria vesca subsp. bracteata ; FvH4 ; Fragaria vesca &lsquo ; Hawaii 4&rsquo ; HSV ; homoeologous sequence variant ; LG ; linkage group ; NMH ; no minor homozygote ; Mbp ; megabase pairs ; MHR ; mono high resolution ; OTV ; off target variant ; PHR ; polyhigh resolution ; QTL ; quantitative trait locus ; SNP ; single nucleotide polymorphism ; SSR ; simple sequence repeat (microsatellite) ; WGG ; whole genome genotyping

刊名：Plant Science

出版年：2016

10.Changes in cell wall polysaccharide composition, gene transcription and alternative splicing in germinating barley embryos

作者：Qisen Zhang^a ; ^{Qisen.zhang@aegic.org.au" class="auth_mail" title="E-mail the corresponding author} ; Xiaoqi Zhang^b ; ^{Xiao-Qi.Zhang@murdoch.edu.au" class="auth_mail" title="E-mail the corresponding author} ; Filomena Pettolino^c ; ^{Filomena.Pettolino@csiro.au" class="auth_mail" title="E-mail the corresponding author} ; Gaofeng Zhou^d ; ^{Gaofeng.zhou@agric.wa.gov.au" class="auth_mail" title="E-mail the corresponding author} ; Chengdao Li^a ; ^b ; ^d ; ^{c.li@murdoch.edu.au" class="auth_mail" title="E-mail the corresponding author}

关键词：AG ; arabinogalactan ; AIR ; alcohol insoluble residues ; AS ; alternative splicing ; A3S ; alternative 3&prime ; splicing ; A5S ; alternation 5&prime ; splicing ; IBSC ; International Barley Sequencing Consortium ; CesA ; cellulose synthase A ; CslF ; cellulose synthase-like F ; DEG ; differentially expressed gene ; EI ; (1 ; 3)(1 ; 4)-β-d-glucan endohydrolase isoenzyme I ; GT ; glycosyl transferase ; HvUGAE ; UDP-glucouronic acid epimerase ; HvUGE ; UDP-Glc epimerase ; HvUXE ; UDP-Xyl epimerase ; HvUXS ; UDP-Xyl synthase ; HX ; h

刊名：Journal of Plant Physiology

出版年：2016

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